RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 TMEM131LA2VDJ0 1609 aa15.83■□□□□ 0.12
SYNC-204ENST00000426909 HDGFP51858 240 aaKnown RBP15.82■□□□□ 0.12
SYNC-204ENST00000426909 ZNF335Q9H4Z2 1342 aaPredicted RBP15.82■□□□□ 0.12
SYNC-204ENST00000426909 TRPM2O94759 1503 aa15.82■□□□□ 0.12
SYNC-204ENST00000426909 LTBP4Q8N2S1 1624 aa15.82■□□□□ 0.12
SYNC-204ENST00000426909 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.79■□□□□ 0.12
SYNC-204ENST00000426909 ZFYVE9O95405 1425 aa15.78■□□□□ 0.12
SYNC-204ENST00000426909 RIMS2Q9UQ26 1411 aa15.78■□□□□ 0.12
SYNC-204ENST00000426909 PPP1R15AO75807 674 aaPredicted RBP15.78■□□□□ 0.12
SYNC-204ENST00000426909 FBXO41Q8TF61 875 aa15.78■□□□□ 0.12
SYNC-204ENST00000426909 MPHOSPH9Q99550 1183 aa15.78■□□□□ 0.12
SYNC-204ENST00000426909 IQSEC2Q5JU85 1478 aa15.78■□□□□ 0.12
SYNC-204ENST00000426909 CLTCL1P53675 1640 aa15.77■□□□□ 0.12
SYNC-204ENST00000426909 CPS1P31327 1500 aa15.77■□□□□ 0.11
SYNC-204ENST00000426909 MYO5BQ9ULV0 1848 aa15.77■□□□□ 0.11
SYNC-204ENST00000426909 ILDR1Q86SU0 546 aaPredicted RBP15.76■□□□□ 0.11
SYNC-204ENST00000426909 BCANQ96GW7 911 aa15.75■□□□□ 0.11
SYNC-204ENST00000426909 PLEKHG1Q9ULL1 1385 aa15.75■□□□□ 0.11
SYNC-204ENST00000426909 ZNF326Q5BKZ1 582 aaKnown RBP15.74■□□□□ 0.11
SYNC-204ENST00000426909 FOXD1Q16676 465 aa15.73■□□□□ 0.11
SYNC-204ENST00000426909 SIN3AQ96ST3 1273 aa15.73■□□□□ 0.11
SYNC-204ENST00000426909 TONSLQ96HA7 1378 aa15.73■□□□□ 0.11
SYNC-204ENST00000426909 KIF1BO60333 1816 aa15.73■□□□□ 0.11
SYNC-204ENST00000426909 CCDC144AA2RUR9 1427 aa15.72■□□□□ 0.11
SYNC-204ENST00000426909 NEUROD1Q13562 356 aa15.71■□□□□ 0.11
SYNC-204ENST00000426909 SLC26A8Q96RN1 970 aa15.71■□□□□ 0.11
SYNC-204ENST00000426909 NUTM2DQ5VT03 806 aaPredicted RBP15.69■□□□□ 0.1
SYNC-204ENST00000426909 DIP2AQ14689 1571 aa15.68■□□□□ 0.1
SYNC-204ENST00000426909 SENP3Q9H4L4 574 aaPredicted RBP15.67■□□□□ 0.1
SYNC-204ENST00000426909 NEXMIFQ5QGS0 1516 aa15.67■□□□□ 0.1
SYNC-204ENST00000426909 RPGRIP1LQ68CZ1 1315 aa15.67■□□□□ 0.1
SYNC-204ENST00000426909 KCNA6P17658 529 aa15.66■□□□□ 0.1
SYNC-204ENST00000426909 TBX22Q9Y458 520 aa15.66■□□□□ 0.1
SYNC-204ENST00000426909 STRCP1A6NGW2 1772 aa15.66■□□□□ 0.1
SYNC-204ENST00000426909 LRRC7Q96NW7 1537 aa15.65■□□□□ 0.1
SYNC-204ENST00000426909 VGFO15240 615 aaPredicted RBP15.64■□□□□ 0.09
SYNC-204ENST00000426909 NWD1Q149M9 1564 aa15.64■□□□□ 0.09
SYNC-204ENST00000426909 ADAMTS13Q76LX8 1427 aa15.64■□□□□ 0.09
SYNC-204ENST00000426909 SETBP1Q9Y6X0 1596 aa15.64■□□□□ 0.09
SYNC-204ENST00000426909 NKTRP30414 1462 aaKnown RBP15.64■□□□□ 0.09
SYNC-204ENST00000426909 PIK3R4Q99570 1358 aa15.63■□□□□ 0.09
SYNC-204ENST00000426909 UBAP1LF5GYI3 381 aa15.63■□□□□ 0.09
SYNC-204ENST00000426909 ANKRD30BQ9BXX2 1392 aa15.62■□□□□ 0.09
SYNC-204ENST00000426909 SPATA31E1Q6ZUB1 1445 aa15.61■□□□□ 0.09
SYNC-204ENST00000426909 TOM1O60784 492 aa15.61■□□□□ 0.09
SYNC-204ENST00000426909 RGL3Q3MIN7 710 aa15.6■□□□□ 0.09
SYNC-204ENST00000426909 NRXN3Q9Y4C0 1643 aa15.6■□□□□ 0.09
SYNC-204ENST00000426909 PPLO60437 1756 aa15.59■□□□□ 0.09
SYNC-204ENST00000426909 PROSER2Q86WR7 435 aaPredicted RBP15.59■□□□□ 0.09
SYNC-204ENST00000426909 CHD2O14647 1828 aaKnown RBP15.59■□□□□ 0.09
SYNC-204ENST00000426909 TMEM94Q12767 1356 aa15.58■□□□□ 0.08
SYNC-204ENST00000426909 SCAF1Q9H7N4 1312 aaKnown RBP15.55■□□□□ 0.08
SYNC-204ENST00000426909 AMOTL2Q9Y2J4 779 aa15.55■□□□□ 0.08
SYNC-204ENST00000426909 XIRP1Q702N8 1843 aaKnown RBP15.54■□□□□ 0.08
SYNC-204ENST00000426909 IFT172Q9UG01 1749 aa15.54■□□□□ 0.08
SYNC-204ENST00000426909 NCOA3Q9Y6Q9 1424 aa15.54■□□□□ 0.08
SYNC-204ENST00000426909 METP08581 1390 aa15.54■□□□□ 0.08
SYNC-204ENST00000426909 PTPRUQ92729 1446 aa15.53■□□□□ 0.08
SYNC-204ENST00000426909 PIP4K2BP78356 416 aa15.53■□□□□ 0.08
SYNC-204ENST00000426909 ALKQ9UM73 1620 aa15.53■□□□□ 0.08
SYNC-204ENST00000426909 MSH6P52701 1360 aa15.52■□□□□ 0.08
SYNC-204ENST00000426909 XRN1Q8IZH2 1706 aaKnown RBP15.52■□□□□ 0.08
SYNC-204ENST00000426909 RBM33Q96EV2 1170 aaKnown RBP15.52■□□□□ 0.08
SYNC-204ENST00000426909 ADGRF5Q8IZF2 1346 aa15.51■□□□□ 0.07
SYNC-204ENST00000426909 C14orf37Q86TY3 774 aa15.51■□□□□ 0.07
SYNC-204ENST00000426909 MYOM2P54296 1465 aa15.51■□□□□ 0.07
SYNC-204ENST00000426909 PIK3C2GO75747 1445 aa15.51■□□□□ 0.07
SYNC-204ENST00000426909 SETD1AO15047 1707 aaKnown RBP15.5■□□□□ 0.07
SYNC-204ENST00000426909 MIER1Q8N108 512 aa15.49■□□□□ 0.07
SYNC-204ENST00000426909 L3MBTL2Q969R5 705 aa15.48■□□□□ 0.07
SYNC-204ENST00000426909 NRXN1Q9ULB1 1477 aa15.47■□□□□ 0.07
SYNC-204ENST00000426909 PTCH1Q13635 1447 aa15.47■□□□□ 0.07
SYNC-204ENST00000426909 STAC3Q96MF2 364 aa15.47■□□□□ 0.07
SYNC-204ENST00000426909 PRAG1Q86YV5 1406 aa15.46■□□□□ 0.07
SYNC-204ENST00000426909 CENPBP07199 599 aaPredicted RBP15.46■□□□□ 0.07
SYNC-204ENST00000426909 C19orf44Q9H6X5 657 aa15.46■□□□□ 0.07
SYNC-204ENST00000426909 LAMC1P11047 1609 aa15.46■□□□□ 0.06
SYNC-204ENST00000426909 ATF3P18847 181 aa15.45■□□□□ 0.06
SYNC-204ENST00000426909 CADPS2Q86UW7 1296 aa15.45■□□□□ 0.06
SYNC-204ENST00000426909 DCAF11Q8TEB1 546 aa15.45■□□□□ 0.06
SYNC-204ENST00000426909 DCCP43146 1447 aa15.43■□□□□ 0.06
SYNC-204ENST00000426909 FAM135BQ49AJ0 1406 aa15.43■□□□□ 0.06
SYNC-204ENST00000426909 C14orf93Q9H972 538 aaKnown RBP15.43■□□□□ 0.06
SYNC-204ENST00000426909 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.43■□□□□ 0.06
SYNC-204ENST00000426909 ROBO2Q9HCK4 1378 aa15.42■□□□□ 0.06
SYNC-204ENST00000426909 HSPA1LP34931 641 aa15.42■□□□□ 0.06
SYNC-204ENST00000426909 SLAIN2Q9P270 581 aa15.42■□□□□ 0.06
SYNC-204ENST00000426909 KDM2AQ9Y2K7 1162 aa15.42■□□□□ 0.06
SYNC-204ENST00000426909 ADGRL3Q9HAR2 1447 aa15.42■□□□□ 0.06
SYNC-204ENST00000426909 LRPPRCP42704 1394 aaKnown RBP15.41■□□□□ 0.06
SYNC-204ENST00000426909 TECPR2O15040 1411 aa15.41■□□□□ 0.06
SYNC-204ENST00000426909 ASXL1Q8IXJ9 1541 aa15.4■□□□□ 0.06
SYNC-204ENST00000426909 EIF4G2P78344 907 aaKnown RBP eCLIP15.4■□□□□ 0.06
SYNC-204ENST00000426909 CFAP70Q5T0N1 1121 aa15.4■□□□□ 0.06
SYNC-204ENST00000426909 TMEM132EQ6IEE7 984 aa15.4■□□□□ 0.06
SYNC-204ENST00000426909 ROBO1Q9Y6N7 1651 aa15.4■□□□□ 0.06
SYNC-204ENST00000426909 YTHDC2Q9H6S0 1430 aaKnown RBP15.4■□□□□ 0.06
SYNC-204ENST00000426909 ABCC11Q96J66 1382 aa15.39■□□□□ 0.05
SYNC-204ENST00000426909 STK26Q9P289 416 aa15.39■□□□□ 0.05
SYNC-204ENST00000426909 KNDC1Q76NI1 1749 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms