RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 ZNF335Q9H4Z2 1342 aaPredicted RBP18.38■□□□□ 0.53
SMIM12-203ENST00000426886 ARHGAP23Q9P227 1491 aa18.38■□□□□ 0.53
SMIM12-203ENST00000426886 SLIT1O75093 1534 aa18.38■□□□□ 0.53
SMIM12-203ENST00000426886 MYO5BQ9ULV0 1848 aa18.37■□□□□ 0.53
SMIM12-203ENST00000426886 NEURL4Q96JN8 1562 aa18.37■□□□□ 0.53
SMIM12-203ENST00000426886 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.35■□□□□ 0.53
SMIM12-203ENST00000426886 ANKRD30BQ9BXX2 1392 aa18.34■□□□□ 0.53
SMIM12-203ENST00000426886 ZFYVE9O95405 1425 aa18.34■□□□□ 0.53
SMIM12-203ENST00000426886 POLR1AO95602 1720 aaPredicted RBP18.33■□□□□ 0.53
SMIM12-203ENST00000426886 MED14O60244 1454 aa18.33■□□□□ 0.52
SMIM12-203ENST00000426886 KDM5AP29375 1690 aaKnown RBP18.32■□□□□ 0.52
SMIM12-203ENST00000426886 IQGAP1P46940 1657 aa18.29■□□□□ 0.52
SMIM12-203ENST00000426886 KIF1BO60333 1816 aa18.29■□□□□ 0.52
SMIM12-203ENST00000426886 VGFO15240 615 aaPredicted RBP18.28■□□□□ 0.52
SMIM12-203ENST00000426886 SIN3AQ96ST3 1273 aa18.28■□□□□ 0.52
SMIM12-203ENST00000426886 PLEKHG1Q9ULL1 1385 aa18.28■□□□□ 0.52
SMIM12-203ENST00000426886 NEUROD1Q13562 356 aa18.27■□□□□ 0.52
SMIM12-203ENST00000426886 DHX57Q6P158 1386 aaKnown RBP18.27■□□□□ 0.51
SMIM12-203ENST00000426886 CERKQ8TCT0 537 aa18.26■□□□□ 0.51
SMIM12-203ENST00000426886 KDM2AQ9Y2K7 1162 aa18.26■□□□□ 0.51
SMIM12-203ENST00000426886 SPATA31E1Q6ZUB1 1445 aa18.26■□□□□ 0.51
SMIM12-203ENST00000426886 RBM33Q96EV2 1170 aaKnown RBP18.25■□□□□ 0.51
SMIM12-203ENST00000426886 RPGRIP1LQ68CZ1 1315 aa18.25■□□□□ 0.51
SMIM12-203ENST00000426886 ADGRF5Q8IZF2 1346 aa18.25■□□□□ 0.51
SMIM12-203ENST00000426886 NEXMIFQ5QGS0 1516 aa18.24■□□□□ 0.51
SMIM12-203ENST00000426886 DCAF11Q8TEB1 546 aa18.23■□□□□ 0.51
SMIM12-203ENST00000426886 TBX22Q9Y458 520 aa18.22■□□□□ 0.51
SMIM12-203ENST00000426886 ADAMTS13Q76LX8 1427 aa18.21■□□□□ 0.51
SMIM12-203ENST00000426886 LTBP4Q8N2S1 1624 aa18.21■□□□□ 0.5
SMIM12-203ENST00000426886 KCNA6P17658 529 aa18.19■□□□□ 0.5
SMIM12-203ENST00000426886 PROSER2Q86WR7 435 aaPredicted RBP18.18■□□□□ 0.5
SMIM12-203ENST00000426886 AMOTL2Q9Y2J4 779 aa18.18■□□□□ 0.5
SMIM12-203ENST00000426886 METP08581 1390 aa18.17■□□□□ 0.5
SMIM12-203ENST00000426886 TMEM132EQ6IEE7 984 aa18.16■□□□□ 0.5
SMIM12-203ENST00000426886 CFAP70Q5T0N1 1121 aa18.14■□□□□ 0.49
SMIM12-203ENST00000426886 STRCP1A6NGW2 1772 aa18.14■□□□□ 0.49
SMIM12-203ENST00000426886 PPLO60437 1756 aa18.14■□□□□ 0.49
SMIM12-203ENST00000426886 STK26Q9P289 416 aa18.13■□□□□ 0.49
SMIM12-203ENST00000426886 L3MBTL2Q969R5 705 aa18.13■□□□□ 0.49
SMIM12-203ENST00000426886 PTPRUQ92729 1446 aa18.12■□□□□ 0.49
SMIM12-203ENST00000426886 NRXN3Q9Y4C0 1643 aa18.12■□□□□ 0.49
SMIM12-203ENST00000426886 SETBP1Q9Y6X0 1596 aa18.12■□□□□ 0.49
SMIM12-203ENST00000426886 UBAP1LF5GYI3 381 aa18.11■□□□□ 0.49
SMIM12-203ENST00000426886 C14orf37Q86TY3 774 aa18.11■□□□□ 0.49
SMIM12-203ENST00000426886 TMEM94Q12767 1356 aa18.11■□□□□ 0.49
SMIM12-203ENST00000426886 CPS1P31327 1500 aa18.11■□□□□ 0.49
SMIM12-203ENST00000426886 LRRC7Q96NW7 1537 aa18.11■□□□□ 0.49
SMIM12-203ENST00000426886 CCER1Q8TC90 406 aaPredicted RBP18.1■□□□□ 0.49
SMIM12-203ENST00000426886 ALKQ9UM73 1620 aa18.09■□□□□ 0.49
SMIM12-203ENST00000426886 ILDR1Q86SU0 546 aaPredicted RBP18.09■□□□□ 0.49
SMIM12-203ENST00000426886 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
SMIM12-203ENST00000426886 PIK3C2GO75747 1445 aa18.08■□□□□ 0.49
SMIM12-203ENST00000426886 C14orf93Q9H972 538 aaKnown RBP18.08■□□□□ 0.49
SMIM12-203ENST00000426886 PIK3R4Q99570 1358 aa18.08■□□□□ 0.48
SMIM12-203ENST00000426886 PIP4K2BP78356 416 aa18.07■□□□□ 0.48
SMIM12-203ENST00000426886 FBXO41Q8TF61 875 aa18.07■□□□□ 0.48
SMIM12-203ENST00000426886 DIP2AQ14689 1571 aa18.07■□□□□ 0.48
SMIM12-203ENST00000426886 IFT172Q9UG01 1749 aa18.06■□□□□ 0.48
SMIM12-203ENST00000426886 MYOM2P54296 1465 aa18.05■□□□□ 0.48
SMIM12-203ENST00000426886 CHD2O14647 1828 aaKnown RBP18.05■□□□□ 0.48
SMIM12-203ENST00000426886 TOM1O60784 492 aa18.03■□□□□ 0.48
SMIM12-203ENST00000426886 TONSLQ96HA7 1378 aa18.03■□□□□ 0.48
SMIM12-203ENST00000426886 WAPLQ7Z5K2 1190 aa18.03■□□□□ 0.48
SMIM12-203ENST00000426886 STAC3Q96MF2 364 aa18.03■□□□□ 0.48
SMIM12-203ENST00000426886 NRXN1Q9ULB1 1477 aa18.03■□□□□ 0.48
SMIM12-203ENST00000426886 NKTRP30414 1462 aaKnown RBP18.02■□□□□ 0.48
SMIM12-203ENST00000426886 ROBO2Q9HCK4 1378 aa18.02■□□□□ 0.48
SMIM12-203ENST00000426886 NWD1Q149M9 1564 aa18.02■□□□□ 0.47
SMIM12-203ENST00000426886 SAFB2Q14151 953 aaKnown RBP eCLIP18.02■□□□□ 0.47
SMIM12-203ENST00000426886 NBPF1Q3BBV0 1214 aa18.01■□□□□ 0.47
SMIM12-203ENST00000426886 TRAK1Q9UPV9 953 aa18.01■□□□□ 0.47
SMIM12-203ENST00000426886 MSH6P52701 1360 aa17.99■□□□□ 0.47
SMIM12-203ENST00000426886 YTHDC2Q9H6S0 1430 aaKnown RBP17.99■□□□□ 0.47
SMIM12-203ENST00000426886 SETD1AO15047 1707 aaKnown RBP17.99■□□□□ 0.47
SMIM12-203ENST00000426886 C19orf44Q9H6X5 657 aa17.99■□□□□ 0.47
SMIM12-203ENST00000426886 IQSEC2Q5JU85 1478 aa17.98■□□□□ 0.47
SMIM12-203ENST00000426886 LRPPRCP42704 1394 aaKnown RBP17.98■□□□□ 0.47
SMIM12-203ENST00000426886 ASXL1Q8IXJ9 1541 aa17.98■□□□□ 0.47
SMIM12-203ENST00000426886 PRAG1Q86YV5 1406 aa17.97■□□□□ 0.47
SMIM12-203ENST00000426886 ATF3P18847 181 aa17.97■□□□□ 0.47
SMIM12-203ENST00000426886 NBPF8Q3BBV2 869 aa17.97■□□□□ 0.47
SMIM12-203ENST00000426886 PLEKHH1Q9ULM0 1364 aa17.96■□□□□ 0.47
SMIM12-203ENST00000426886 XRN1Q8IZH2 1706 aaKnown RBP17.96■□□□□ 0.47
SMIM12-203ENST00000426886 ABCC11Q96J66 1382 aa17.96■□□□□ 0.47
SMIM12-203ENST00000426886 PRAM1Q96QH2 718 aa17.96■□□□□ 0.47
SMIM12-203ENST00000426886 XIRP1Q702N8 1843 aaKnown RBP17.95■□□□□ 0.46
SMIM12-203ENST00000426886 POGKQ9P215 609 aa17.95■□□□□ 0.46
SMIM12-203ENST00000426886 SLAIN2Q9P270 581 aa17.94■□□□□ 0.46
SMIM12-203ENST00000426886 NUTM2FA1L443 756 aa17.93■□□□□ 0.46
SMIM12-203ENST00000426886 CADPS2Q86UW7 1296 aa17.93■□□□□ 0.46
SMIM12-203ENST00000426886 PTCH1Q13635 1447 aa17.93■□□□□ 0.46
SMIM12-203ENST00000426886 CLSPNQ9HAW4 1339 aa17.91■□□□□ 0.46
SMIM12-203ENST00000426886 HIRIP3Q9BW71 556 aaPredicted RBP17.91■□□□□ 0.46
SMIM12-203ENST00000426886 ADGRB1O14514 1584 aa17.91■□□□□ 0.46
SMIM12-203ENST00000426886 NCOA3Q9Y6Q9 1424 aa17.91■□□□□ 0.46
SMIM12-203ENST00000426886 LAMC1P11047 1609 aa17.89■□□□□ 0.45
SMIM12-203ENST00000426886 ROCK2O75116 1388 aaKnown RBP17.89■□□□□ 0.45
SMIM12-203ENST00000426886 TECPR2O15040 1411 aa17.89■□□□□ 0.45
SMIM12-203ENST00000426886 MINK1Q8N4C8 1332 aaPredicted RBP17.89■□□□□ 0.45
SMIM12-203ENST00000426886 ADGRL3Q9HAR2 1447 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms