RNA–Protein interactions for RNA: ENST00000426712.1

COPS6-204, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 716 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-204ENST00000426712 PROSER2Q86WR7 435 aaPredicted RBP13.77□□□□□ -0.21
COPS6-204ENST00000426712 PHF23Q9BUL5 403 aaPredicted RBP13.77□□□□□ -0.21
COPS6-204ENST00000426712 ZFYVE9O95405 1425 aa13.76□□□□□ -0.21
COPS6-204ENST00000426712 ROBO1Q9Y6N7 1651 aa13.75□□□□□ -0.21
COPS6-204ENST00000426712 NKTRP30414 1462 aaKnown RBP13.74□□□□□ -0.21
COPS6-204ENST00000426712 HDGFP51858 240 aaKnown RBP13.74□□□□□ -0.21
COPS6-204ENST00000426712 FAM50AQ14320 339 aaKnown RBP13.74□□□□□ -0.21
COPS6-204ENST00000426712 SENP3Q9H4L4 574 aaPredicted RBP13.74□□□□□ -0.21
COPS6-204ENST00000426712 UNC13BO14795 1591 aa13.74□□□□□ -0.21
COPS6-204ENST00000426712 PLEKHG1Q9ULL1 1385 aa13.73□□□□□ -0.21
COPS6-204ENST00000426712 E9PCH4 1651 aa13.73□□□□□ -0.21
COPS6-204ENST00000426712 TBX22Q9Y458 520 aa13.73□□□□□ -0.21
COPS6-204ENST00000426712 RBM33Q96EV2 1170 aaKnown RBP13.72□□□□□ -0.21
COPS6-204ENST00000426712 RIMS2Q9UQ26 1411 aa13.71□□□□□ -0.22
COPS6-204ENST00000426712 NCOA3Q9Y6Q9 1424 aa13.71□□□□□ -0.22
COPS6-204ENST00000426712 ROCK1Q13464 1354 aa13.71□□□□□ -0.22
COPS6-204ENST00000426712 SLAIN2Q9P270 581 aa13.7□□□□□ -0.22
COPS6-204ENST00000426712 IQGAP3Q86VI3 1631 aa13.7□□□□□ -0.22
COPS6-204ENST00000426712 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.69□□□□□ -0.22
COPS6-204ENST00000426712 PHLPP1O60346 1717 aa13.69□□□□□ -0.22
COPS6-204ENST00000426712 MSH6P52701 1360 aa13.69□□□□□ -0.22
COPS6-204ENST00000426712 BCANQ96GW7 911 aa13.68□□□□□ -0.22
COPS6-204ENST00000426712 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.67□□□□□ -0.22
COPS6-204ENST00000426712 ADAMTS13Q76LX8 1427 aa13.66□□□□□ -0.22
COPS6-204ENST00000426712 POTEAQ6S8J7 498 aa13.66□□□□□ -0.22
COPS6-204ENST00000426712 PIK3R4Q99570 1358 aa13.66□□□□□ -0.22
COPS6-204ENST00000426712 DIP2AQ14689 1571 aa13.65□□□□□ -0.22
COPS6-204ENST00000426712 PPP1R15AO75807 674 aaPredicted RBP13.64□□□□□ -0.23
COPS6-204ENST00000426712 C19orf44Q9H6X5 657 aa13.63□□□□□ -0.23
COPS6-204ENST00000426712 COL16A1Q07092 1604 aaPredicted RBP13.63□□□□□ -0.23
COPS6-204ENST00000426712 JCADQ9P266 1359 aa13.62□□□□□ -0.23
COPS6-204ENST00000426712 CHGAP10645 457 aaKnown RBP13.62□□□□□ -0.23
COPS6-204ENST00000426712 SPHKAPQ2M3C7 1700 aa13.61□□□□□ -0.23
COPS6-204ENST00000426712 NUP155O75694 1391 aa13.61□□□□□ -0.23
COPS6-204ENST00000426712 NUTM2DQ5VT03 806 aaPredicted RBP13.61□□□□□ -0.23
COPS6-204ENST00000426712 CADPS2Q86UW7 1296 aa13.61□□□□□ -0.23
COPS6-204ENST00000426712 PTPRUQ92729 1446 aa13.6□□□□□ -0.23
COPS6-204ENST00000426712 NRXN3Q9Y4C0 1643 aa13.6□□□□□ -0.23
COPS6-204ENST00000426712 TRPM2O94759 1503 aa13.59□□□□□ -0.23
COPS6-204ENST00000426712 AMOTL2Q9Y2J4 779 aa13.59□□□□□ -0.23
COPS6-204ENST00000426712 AHDC1Q5TGY3 1603 aaPredicted RBP13.59□□□□□ -0.23
COPS6-204ENST00000426712 SHPRHQ149N8 1683 aa13.59□□□□□ -0.23
COPS6-204ENST00000426712 SETBP1Q9Y6X0 1596 aa13.58□□□□□ -0.24
COPS6-204ENST00000426712 XRN1Q8IZH2 1706 aaKnown RBP13.57□□□□□ -0.24
COPS6-204ENST00000426712 ATF3P18847 181 aa13.57□□□□□ -0.24
COPS6-204ENST00000426712 SPATA31A6Q5VVP1 1343 aa13.57□□□□□ -0.24
COPS6-204ENST00000426712 KIF1BO60333 1816 aa13.56□□□□□ -0.24
COPS6-204ENST00000426712 C14orf37Q86TY3 774 aa13.55□□□□□ -0.24
COPS6-204ENST00000426712 DCCP43146 1447 aa13.55□□□□□ -0.24
COPS6-204ENST00000426712 ITGAEP38570 1179 aa13.54□□□□□ -0.24
COPS6-204ENST00000426712 BRINP3Q76B58 766 aa13.54□□□□□ -0.24
COPS6-204ENST00000426712 LRP6O75581 1613 aa13.53□□□□□ -0.24
COPS6-204ENST00000426712 METP08581 1390 aa13.52□□□□□ -0.25
COPS6-204ENST00000426712 NHSL1Q5SYE7 1610 aa13.52□□□□□ -0.25
COPS6-204ENST00000426712 SETD1AO15047 1707 aaKnown RBP13.52□□□□□ -0.25
COPS6-204ENST00000426712 CLTCL1P53675 1640 aa13.51□□□□□ -0.25
COPS6-204ENST00000426712 NEXMIFQ5QGS0 1516 aa13.51□□□□□ -0.25
COPS6-204ENST00000426712 ZNF772Q68DY9 489 aaPredicted RBP13.5□□□□□ -0.25
COPS6-204ENST00000426712 PPARGC1BQ86YN6 1023 aaKnown RBP13.5□□□□□ -0.25
COPS6-204ENST00000426712 MST1RQ04912 1400 aa13.49□□□□□ -0.25
COPS6-204ENST00000426712 SETD5Q9C0A6 1442 aa13.49□□□□□ -0.25
COPS6-204ENST00000426712 ZNF326Q5BKZ1 582 aaKnown RBP13.49□□□□□ -0.25
COPS6-204ENST00000426712 ASXL1Q8IXJ9 1541 aa13.49□□□□□ -0.25
COPS6-204ENST00000426712 NAIPQ13075 1403 aa13.48□□□□□ -0.25
COPS6-204ENST00000426712 RRBP1Q9P2E9 1410 aaKnown RBP13.48□□□□□ -0.25
COPS6-204ENST00000426712 NALCNQ8IZF0 1738 aa13.47□□□□□ -0.25
COPS6-204ENST00000426712 LAMC1P11047 1609 aa13.46□□□□□ -0.25
COPS6-204ENST00000426712 MEX3CQ5U5Q3 659 aaKnown RBP13.46□□□□□ -0.25
COPS6-204ENST00000426712 LRRC59Q96AG4 307 aaKnown RBP13.46□□□□□ -0.25
COPS6-204ENST00000426712 ADGRL3Q9HAR2 1447 aa13.46□□□□□ -0.26
COPS6-204ENST00000426712 VGFO15240 615 aaPredicted RBP13.45□□□□□ -0.26
COPS6-204ENST00000426712 PPLO60437 1756 aa13.45□□□□□ -0.26
COPS6-204ENST00000426712 RXRBP28702 533 aa13.44□□□□□ -0.26
COPS6-204ENST00000426712 UPF1Q92900 1129 aaKnown RBP eCLIP13.44□□□□□ -0.26
COPS6-204ENST00000426712 RPGRIP1LQ68CZ1 1315 aa13.43□□□□□ -0.26
COPS6-204ENST00000426712 CDK12Q9NYV4 1490 aaPredicted RBP13.43□□□□□ -0.26
COPS6-204ENST00000426712 PRAG1Q86YV5 1406 aa13.43□□□□□ -0.26
COPS6-204ENST00000426712 NUTM2BA6NNL0 878 aaPredicted RBP13.42□□□□□ -0.26
COPS6-204ENST00000426712 NUTM2EB1AL46 878 aaPredicted RBP13.42□□□□□ -0.26
COPS6-204ENST00000426712 NUTM2AQ8IVF1 878 aaPredicted RBP13.42□□□□□ -0.26
COPS6-204ENST00000426712 C1orf167Q5SNV9 1468 aa13.42□□□□□ -0.26
COPS6-204ENST00000426712 PTCH1Q13635 1447 aa13.41□□□□□ -0.26
COPS6-204ENST00000426712 DDX17Q92841 729 aaKnown RBP13.41□□□□□ -0.26
COPS6-204ENST00000426712 AFF2P51816 1311 aa13.4□□□□□ -0.26
COPS6-204ENST00000426712 HFM1A2PYH4 1435 aa13.4□□□□□ -0.26
COPS6-204ENST00000426712 TRIM52Q96A61 297 aa13.4□□□□□ -0.26
COPS6-204ENST00000426712 PNPLA6Q8IY17 1366 aa13.4□□□□□ -0.26
COPS6-204ENST00000426712 ROBO2Q9HCK4 1378 aa13.39□□□□□ -0.27
COPS6-204ENST00000426712 SOS2Q07890 1332 aaPredicted RBP13.39□□□□□ -0.27
COPS6-204ENST00000426712 SLC4A1APQ9BWU0 796 aaKnown RBP13.38□□□□□ -0.27
COPS6-204ENST00000426712 QTRT2Q9H974 415 aaKnown RBP13.38□□□□□ -0.27
COPS6-204ENST00000426712 ORAI2Q96SN7 254 aa13.37□□□□□ -0.27
COPS6-204ENST00000426712 RBM6P78332 1123 aaKnown RBP13.36□□□□□ -0.27
COPS6-204ENST00000426712 IFT172Q9UG01 1749 aa13.36□□□□□ -0.27
COPS6-204ENST00000426712 COL22A1Q8NFW1 1626 aaPredicted RBP13.35□□□□□ -0.27
COPS6-204ENST00000426712 C8orf37Q96NL8 207 aa13.35□□□□□ -0.27
COPS6-204ENST00000426712 MARF1Q9Y4F3 1742 aaKnown RBP13.35□□□□□ -0.27
COPS6-204ENST00000426712 FNBP4Q8N3X1 1017 aaPredicted RBP13.33□□□□□ -0.28
COPS6-204ENST00000426712 NGLY1Q96IV0 654 aa13.33□□□□□ -0.28
COPS6-204ENST00000426712 ADGRF5Q8IZF2 1346 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms