RNA–Protein interactions for RNA: ENST00000425346.5

CYB561D2-205, Transcript of cytochrome b561 family member D2, human

APPRIS P1 TSL 1 (best) BASIC

Gene CYB561D2, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYB561D2-205	ENST00000425346	UNC13B	O14795	1591 aa		32.83	■■■□□ 2.85
CYB561D2-205	ENST00000425346	ROCK1	Q13464	1354 aa		32.82	■■■□□ 2.84
CYB561D2-205	ENST00000425346	ITGAE	P38570	1179 aa		32.8	■■■□□ 2.84
CYB561D2-205	ENST00000425346	BCAN	Q96GW7	911 aa		32.8	■■■□□ 2.84
CYB561D2-205	ENST00000425346	TMEM131L	A2VDJ0	1609 aa		32.79	■■■□□ 2.84
CYB561D2-205	ENST00000425346	RIMS2	Q9UQ26	1411 aa		32.78	■■■□□ 2.84
CYB561D2-205	ENST00000425346		E9PCH4	1651 aa		32.77	■■■□□ 2.84
CYB561D2-205	ENST00000425346	GCC2	Q8IWJ2	1684 aa		32.77	■■■□□ 2.84
CYB561D2-205	ENST00000425346	FAM135B	Q49AJ0	1406 aa		32.77	■■■□□ 2.84
CYB561D2-205	ENST00000425346	PLEKHG1	Q9ULL1	1385 aa		32.76	■■■□□ 2.83
CYB561D2-205	ENST00000425346	NWD1	Q149M9	1564 aa		32.75	■■■□□ 2.83
CYB561D2-205	ENST00000425346	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.75	■■■□□ 2.83
CYB561D2-205	ENST00000425346	PHF23	Q9BUL5	403 aa	Predicted RBP	32.75	■■■□□ 2.83
CYB561D2-205	ENST00000425346	CHGA	P10645	457 aa	Known RBP	32.74	■■■□□ 2.83
CYB561D2-205	ENST00000425346	NUP155	O75694	1391 aa		32.71	■■■□□ 2.83
CYB561D2-205	ENST00000425346	PPP1R15A	O75807	674 aa	Predicted RBP	32.71	■■■□□ 2.83
CYB561D2-205	ENST00000425346	RGS17	Q9UGC6	210 aa	Predicted RBP	32.71	■■■□□ 2.83
CYB561D2-205	ENST00000425346	IQGAP3	Q86VI3	1631 aa		32.7	■■■□□ 2.83
CYB561D2-205	ENST00000425346	NKTR	P30414	1462 aa	Known RBP	32.7	■■■□□ 2.82
CYB561D2-205	ENST00000425346	TBX22	Q9Y458	520 aa		32.67	■■■□□ 2.82
CYB561D2-205	ENST00000425346	HDGF	P51858	240 aa	Known RBP	32.66	■■■□□ 2.82
CYB561D2-205	ENST00000425346	CHD2	O14647	1828 aa	Known RBP	32.66	■■■□□ 2.82
CYB561D2-205	ENST00000425346	ROBO1	Q9Y6N7	1651 aa		32.65	■■■□□ 2.82
CYB561D2-205	ENST00000425346	ADAMTS13	Q76LX8	1427 aa		32.65	■■■□□ 2.82
CYB561D2-205	ENST00000425346	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.62	■■■□□ 2.81
CYB561D2-205	ENST00000425346	SLAIN2	Q9P270	581 aa		32.62	■■■□□ 2.81
CYB561D2-205	ENST00000425346	MSH6	P52701	1360 aa		32.6	■■■□□ 2.81
CYB561D2-205	ENST00000425346	PTPRU	Q92729	1446 aa		32.51	■■■□□ 2.79
CYB561D2-205	ENST00000425346	AMOTL2	Q9Y2J4	779 aa		32.48	■■■□□ 2.79
CYB561D2-205	ENST00000425346	NCOA3	Q9Y6Q9	1424 aa		32.47	■■■□□ 2.79
CYB561D2-205	ENST00000425346	POTEA	Q6S8J7	498 aa		32.47	■■■□□ 2.79
CYB561D2-205	ENST00000425346	PIK3R4	Q99570	1358 aa		32.46	■■■□□ 2.79
CYB561D2-205	ENST00000425346	DIP2A	Q14689	1571 aa		32.45	■■■□□ 2.79
CYB561D2-205	ENST00000425346	RRBP1	Q9P2E9	1410 aa	Known RBP	32.45	■■■□□ 2.79
CYB561D2-205	ENST00000425346	C14orf37	Q86TY3	774 aa		32.45	■■■□□ 2.78
CYB561D2-205	ENST00000425346	PHLPP1	O60346	1717 aa		32.43	■■■□□ 2.78
CYB561D2-205	ENST00000425346	SPHKAP	Q2M3C7	1700 aa		32.43	■■■□□ 2.78
CYB561D2-205	ENST00000425346	C19orf44	Q9H6X5	657 aa		32.43	■■■□□ 2.78
CYB561D2-205	ENST00000425346	NRXN3	Q9Y4C0	1643 aa		32.43	■■■□□ 2.78
CYB561D2-205	ENST00000425346	NAIP	Q13075	1403 aa		32.42	■■■□□ 2.78
CYB561D2-205	ENST00000425346	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.41	■■■□□ 2.78
CYB561D2-205	ENST00000425346	TRPM2	O94759	1503 aa		32.4	■■■□□ 2.78
CYB561D2-205	ENST00000425346	ZNF326	Q5BKZ1	582 aa	Known RBP	32.39	■■■□□ 2.78
CYB561D2-205	ENST00000425346	MET	P08581	1390 aa		32.38	■■■□□ 2.77
CYB561D2-205	ENST00000425346	CADPS2	Q86UW7	1296 aa		32.37	■■■□□ 2.77
CYB561D2-205	ENST00000425346	COL16A1	Q07092	1604 aa	Predicted RBP	32.37	■■■□□ 2.77
CYB561D2-205	ENST00000425346	JCAD	Q9P266	1359 aa		32.36	■■■□□ 2.77
CYB561D2-205	ENST00000425346	CLTCL1	P53675	1640 aa		32.36	■■■□□ 2.77
CYB561D2-205	ENST00000425346	ATF3	P18847	181 aa		32.35	■■■□□ 2.77
CYB561D2-205	ENST00000425346	SETBP1	Q9Y6X0	1596 aa		32.35	■■■□□ 2.77
CYB561D2-205	ENST00000425346	XRN1	Q8IZH2	1706 aa	Known RBP	32.31	■■■□□ 2.76
CYB561D2-205	ENST00000425346	BRINP3	Q76B58	766 aa		32.3	■■■□□ 2.76
CYB561D2-205	ENST00000425346	NEXMIF	Q5QGS0	1516 aa		32.29	■■■□□ 2.76
CYB561D2-205	ENST00000425346	LRP6	O75581	1613 aa		32.27	■■■□□ 2.76
CYB561D2-205	ENST00000425346	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.25	■■■□□ 2.75
CYB561D2-205	ENST00000425346	TRIM52	Q96A61	297 aa		32.25	■■■□□ 2.75
CYB561D2-205	ENST00000425346	HFM1	A2PYH4	1435 aa		32.23	■■■□□ 2.75
CYB561D2-205	ENST00000425346	DCC	P43146	1447 aa		32.2	■■■□□ 2.75
CYB561D2-205	ENST00000425346	MST1R	Q04912	1400 aa		32.2	■■■□□ 2.75
CYB561D2-205	ENST00000425346	SPATA31A6	Q5VVP1	1343 aa		32.2	■■■□□ 2.74
CYB561D2-205	ENST00000425346	DDX17	Q92841	729 aa	Known RBP	32.17	■■■□□ 2.74
CYB561D2-205	ENST00000425346	KIF1B	O60333	1816 aa		32.17	■■■□□ 2.74
CYB561D2-205	ENST00000425346	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.16	■■■□□ 2.74
CYB561D2-205	ENST00000425346	ASXL1	Q8IXJ9	1541 aa		32.16	■■■□□ 2.74
CYB561D2-205	ENST00000425346	FOXD1	Q16676	465 aa		32.15	■■■□□ 2.74
CYB561D2-205	ENST00000425346	SHPRH	Q149N8	1683 aa		32.13	■■■□□ 2.73
CYB561D2-205	ENST00000425346	ADGRL3	Q9HAR2	1447 aa		32.13	■■■□□ 2.73
CYB561D2-205	ENST00000425346	VGF	O15240	615 aa	Predicted RBP	32.1	■■■□□ 2.73
CYB561D2-205	ENST00000425346	MEX3C	Q5U5Q3	659 aa	Known RBP	32.1	■■■□□ 2.73
CYB561D2-205	ENST00000425346	NALCN	Q8IZF0	1738 aa		32.1	■■■□□ 2.73
CYB561D2-205	ENST00000425346	ROBO2	Q9HCK4	1378 aa		32.1	■■■□□ 2.73
CYB561D2-205	ENST00000425346	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.09	■■■□□ 2.73
CYB561D2-205	ENST00000425346	NUTM2E	B1AL46	878 aa	Predicted RBP	32.09	■■■□□ 2.73
CYB561D2-205	ENST00000425346	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.09	■■■□□ 2.73
CYB561D2-205	ENST00000425346	SETD1A	O15047	1707 aa	Known RBP	32.09	■■■□□ 2.73
CYB561D2-205	ENST00000425346	SETD5	Q9C0A6	1442 aa		32.07	■■■□□ 2.72
CYB561D2-205	ENST00000425346	NHSL1	Q5SYE7	1610 aa		32.05	■■■□□ 2.72
CYB561D2-205	ENST00000425346	RPGRIP1L	Q68CZ1	1315 aa		32.05	■■■□□ 2.72
CYB561D2-205	ENST00000425346	C1orf167	Q5SNV9	1468 aa		32.02	■■■□□ 2.72
CYB561D2-205	ENST00000425346	ZNF772	Q68DY9	489 aa	Predicted RBP	32.01	■■■□□ 2.72
CYB561D2-205	ENST00000425346	PTCH1	Q13635	1447 aa		32.01	■■■□□ 2.71
CYB561D2-205	ENST00000425346	LRRC59	Q96AG4	307 aa	Known RBP	32	■■■□□ 2.71
CYB561D2-205	ENST00000425346	PPL	O60437	1756 aa		32	■■■□□ 2.71
CYB561D2-205	ENST00000425346	ORAI2	Q96SN7	254 aa		32	■■■□□ 2.71
CYB561D2-205	ENST00000425346	ADGRF5	Q8IZF2	1346 aa		31.97	■■■□□ 2.71
CYB561D2-205	ENST00000425346	PNPLA6	Q8IY17	1366 aa		31.96	■■■□□ 2.71
CYB561D2-205	ENST00000425346	PRAG1	Q86YV5	1406 aa		31.95	■■■□□ 2.71
CYB561D2-205	ENST00000425346	RGL3	Q3MIN7	710 aa		31.95	■■■□□ 2.7
CYB561D2-205	ENST00000425346	MPHOSPH9	Q99550	1183 aa		31.94	■■■□□ 2.7
CYB561D2-205	ENST00000425346	AFF2	P51816	1311 aa		31.94	■■■□□ 2.7
CYB561D2-205	ENST00000425346	SPATA31E1	Q6ZUB1	1445 aa		31.92	■■■□□ 2.7
CYB561D2-205	ENST00000425346	RXRB	P28702	533 aa		31.9	■■■□□ 2.7
CYB561D2-205	ENST00000425346	CCDC144A	A2RUR9	1427 aa		31.88	■■■□□ 2.69
CYB561D2-205	ENST00000425346	SOS2	Q07890	1332 aa	Predicted RBP	31.88	■■■□□ 2.69
CYB561D2-205	ENST00000425346	C8orf37	Q96NL8	207 aa		31.88	■■■□□ 2.69
CYB561D2-205	ENST00000425346	LAMC1	P11047	1609 aa		31.87	■■■□□ 2.69
CYB561D2-205	ENST00000425346	WAPL	Q7Z5K2	1190 aa		31.85	■■■□□ 2.69
CYB561D2-205	ENST00000425346	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.85	■■■□□ 2.69
CYB561D2-205	ENST00000425346	STK26	Q9P289	416 aa		31.85	■■■□□ 2.69
CYB561D2-205	ENST00000425346	TMEM132E	Q6IEE7	984 aa		31.84	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms