RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 STRCP1A6NGW2 1772 aa33.29■■■□□ 2.92
PTCHD3P2-201ENST00000424937 CPS1P31327 1500 aa33.27■■■□□ 2.92
PTCHD3P2-201ENST00000424937 IQSEC2Q5JU85 1478 aa33.25■■■□□ 2.91
PTCHD3P2-201ENST00000424937 ACIN1Q9UKV3 1341 aaKnown RBP33.23■■■□□ 2.91
PTCHD3P2-201ENST00000424937 PPP1R15AO75807 674 aaPredicted RBP33.22■■■□□ 2.91
PTCHD3P2-201ENST00000424937 FOXD1Q16676 465 aa33.21■■■□□ 2.91
PTCHD3P2-201ENST00000424937 MPHOSPH9Q99550 1183 aa33.21■■■□□ 2.91
PTCHD3P2-201ENST00000424937 HDGFP51858 240 aaKnown RBP33.19■■■□□ 2.9
PTCHD3P2-201ENST00000424937 PLEKHG1Q9ULL1 1385 aa33.18■■■□□ 2.9
PTCHD3P2-201ENST00000424937 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.17■■■□□ 2.9
PTCHD3P2-201ENST00000424937 SENP3Q9H4L4 574 aaPredicted RBP33.17■■■□□ 2.9
PTCHD3P2-201ENST00000424937 NUTM2DQ5VT03 806 aaPredicted RBP33.16■■■□□ 2.9
PTCHD3P2-201ENST00000424937 BCANQ96GW7 911 aa33.16■■■□□ 2.9
PTCHD3P2-201ENST00000424937 ZNF326Q5BKZ1 582 aaKnown RBP33.14■■■□□ 2.9
PTCHD3P2-201ENST00000424937 SLC26A8Q96RN1 970 aa33.14■■■□□ 2.9
PTCHD3P2-201ENST00000424937 NEXMIFQ5QGS0 1516 aa33.12■■■□□ 2.89
PTCHD3P2-201ENST00000424937 CCDC144AA2RUR9 1427 aa33.1■■■□□ 2.89
PTCHD3P2-201ENST00000424937 DIP2AQ14689 1571 aa33.09■■■□□ 2.89
PTCHD3P2-201ENST00000424937 NWD1Q149M9 1564 aa33.07■■■□□ 2.88
PTCHD3P2-201ENST00000424937 LRRC7Q96NW7 1537 aa33.07■■■□□ 2.88
PTCHD3P2-201ENST00000424937 CHD2O14647 1828 aaKnown RBP33.07■■■□□ 2.88
PTCHD3P2-201ENST00000424937 XIRP1Q702N8 1843 aaKnown RBP33.06■■■□□ 2.88
PTCHD3P2-201ENST00000424937 PPLO60437 1756 aa33.06■■■□□ 2.88
PTCHD3P2-201ENST00000424937 NRXN3Q9Y4C0 1643 aa33.06■■■□□ 2.88
PTCHD3P2-201ENST00000424937 ADAMTS13Q76LX8 1427 aa33.03■■■□□ 2.88
PTCHD3P2-201ENST00000424937 SETBP1Q9Y6X0 1596 aa33.03■■■□□ 2.88
PTCHD3P2-201ENST00000424937 HRCP23327 699 aa33■■■□□ 2.87
PTCHD3P2-201ENST00000424937 KCNA6P17658 529 aa32.98■■■□□ 2.87
PTCHD3P2-201ENST00000424937 NKTRP30414 1462 aaKnown RBP32.98■■■□□ 2.87
PTCHD3P2-201ENST00000424937 IFT172Q9UG01 1749 aa32.97■■■□□ 2.87
PTCHD3P2-201ENST00000424937 UBAP1LF5GYI3 381 aa32.97■■■□□ 2.87
PTCHD3P2-201ENST00000424937 TBX22Q9Y458 520 aa32.96■■■□□ 2.87
PTCHD3P2-201ENST00000424937 SPATA31E1Q6ZUB1 1445 aa32.94■■■□□ 2.86
PTCHD3P2-201ENST00000424937 RPGRIP1LQ68CZ1 1315 aa32.91■■■□□ 2.86
PTCHD3P2-201ENST00000424937 PIK3R4Q99570 1358 aa32.89■■■□□ 2.86
PTCHD3P2-201ENST00000424937 SETD1AO15047 1707 aaKnown RBP32.88■■■□□ 2.85
PTCHD3P2-201ENST00000424937 TMEM94Q12767 1356 aa32.87■■■□□ 2.85
PTCHD3P2-201ENST00000424937 RGL3Q3MIN7 710 aa32.87■■■□□ 2.85
PTCHD3P2-201ENST00000424937 ALKQ9UM73 1620 aa32.87■■■□□ 2.85
PTCHD3P2-201ENST00000424937 VGFO15240 615 aaPredicted RBP32.86■■■□□ 2.85
PTCHD3P2-201ENST00000424937 XRN1Q8IZH2 1706 aaKnown RBP32.85■■■□□ 2.85
PTCHD3P2-201ENST00000424937 ANKRD30BQ9BXX2 1392 aa32.85■■■□□ 2.85
PTCHD3P2-201ENST00000424937 PROSER2Q86WR7 435 aaPredicted RBP32.85■■■□□ 2.85
PTCHD3P2-201ENST00000424937 TOM1O60784 492 aa32.84■■■□□ 2.85
PTCHD3P2-201ENST00000424937 PTPRUQ92729 1446 aa32.83■■■□□ 2.85
PTCHD3P2-201ENST00000424937 RBM33Q96EV2 1170 aaKnown RBP32.81■■■□□ 2.84
PTCHD3P2-201ENST00000424937 SCAF1Q9H7N4 1312 aaKnown RBP32.8■■■□□ 2.84
PTCHD3P2-201ENST00000424937 METP08581 1390 aa32.8■■■□□ 2.84
PTCHD3P2-201ENST00000424937 PIP4K2BP78356 416 aa32.78■■■□□ 2.84
PTCHD3P2-201ENST00000424937 AMOTL2Q9Y2J4 779 aa32.76■■■□□ 2.83
PTCHD3P2-201ENST00000424937 ADGRF5Q8IZF2 1346 aa32.75■■■□□ 2.83
PTCHD3P2-201ENST00000424937 TRIM26Q12899 539 aaPredicted RBP32.73■■■□□ 2.83
PTCHD3P2-201ENST00000424937 MSH6P52701 1360 aa32.71■■■□□ 2.83
PTCHD3P2-201ENST00000424937 MYOM2P54296 1465 aa32.7■■■□□ 2.83
PTCHD3P2-201ENST00000424937 PIK3C2GO75747 1445 aa32.68■■■□□ 2.82
PTCHD3P2-201ENST00000424937 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.68■■■□□ 2.82
PTCHD3P2-201ENST00000424937 NCOA3Q9Y6Q9 1424 aa32.68■■■□□ 2.82
PTCHD3P2-201ENST00000424937 C14orf37Q86TY3 774 aa32.66■■■□□ 2.82
PTCHD3P2-201ENST00000424937 LAMC1P11047 1609 aa32.65■■■□□ 2.82
PTCHD3P2-201ENST00000424937 NRXN1Q9ULB1 1477 aa32.64■■■□□ 2.82
PTCHD3P2-201ENST00000424937 ASXL1Q8IXJ9 1541 aa32.62■■■□□ 2.81
PTCHD3P2-201ENST00000424937 NALCNQ8IZF0 1738 aa32.62■■■□□ 2.81
PTCHD3P2-201ENST00000424937 PTCH1Q13635 1447 aa32.6■■■□□ 2.81
PTCHD3P2-201ENST00000424937 ROBO1Q9Y6N7 1651 aa32.6■■■□□ 2.81
PTCHD3P2-201ENST00000424937 KNDC1Q76NI1 1749 aa32.59■■■□□ 2.81
PTCHD3P2-201ENST00000424937 PRAG1Q86YV5 1406 aa32.58■■■□□ 2.81
PTCHD3P2-201ENST00000424937 HSPA1LP34931 641 aa32.55■■■□□ 2.8
PTCHD3P2-201ENST00000424937 C19orf44Q9H6X5 657 aa32.54■■■□□ 2.8
PTCHD3P2-201ENST00000424937 ROBO2Q9HCK4 1378 aa32.54■■■□□ 2.8
PTCHD3P2-201ENST00000424937 ADGRL3Q9HAR2 1447 aa32.52■■■□□ 2.8
PTCHD3P2-201ENST00000424937 DCAF11Q8TEB1 546 aa32.52■■■□□ 2.8
PTCHD3P2-201ENST00000424937 DCCP43146 1447 aa32.51■■■□□ 2.8
PTCHD3P2-201ENST00000424937 FAM135BQ49AJ0 1406 aa32.51■■■□□ 2.8
PTCHD3P2-201ENST00000424937 DHX57Q6P158 1386 aaKnown RBP32.51■■■□□ 2.79
PTCHD3P2-201ENST00000424937 KDM2AQ9Y2K7 1162 aa32.51■■■□□ 2.79
PTCHD3P2-201ENST00000424937 ATF3P18847 181 aa32.5■■■□□ 2.79
PTCHD3P2-201ENST00000424937 TMEM132EQ6IEE7 984 aa32.49■■■□□ 2.79
PTCHD3P2-201ENST00000424937 CADPS2Q86UW7 1296 aa32.49■■■□□ 2.79
PTCHD3P2-201ENST00000424937 C14orf93Q9H972 538 aaKnown RBP32.49■■■□□ 2.79
PTCHD3P2-201ENST00000424937 LRPPRCP42704 1394 aaKnown RBP32.48■■■□□ 2.79
PTCHD3P2-201ENST00000424937 CFAP70Q5T0N1 1121 aa32.48■■■□□ 2.79
PTCHD3P2-201ENST00000424937 SLAIN2Q9P270 581 aa32.48■■■□□ 2.79
PTCHD3P2-201ENST00000424937 TECPR2O15040 1411 aa32.48■■■□□ 2.79
PTCHD3P2-201ENST00000424937 YTHDC2Q9H6S0 1430 aaKnown RBP32.47■■■□□ 2.79
PTCHD3P2-201ENST00000424937 STK26Q9P289 416 aa32.47■■■□□ 2.79
PTCHD3P2-201ENST00000424937 PHLPP1O60346 1717 aa32.43■■■□□ 2.78
PTCHD3P2-201ENST00000424937 STAC3Q96MF2 364 aa32.42■■■□□ 2.78
PTCHD3P2-201ENST00000424937 ABCC11Q96J66 1382 aa32.42■■■□□ 2.78
PTCHD3P2-201ENST00000424937 ADGRB1O14514 1584 aa32.41■■■□□ 2.78
PTCHD3P2-201ENST00000424937 MST1RQ04912 1400 aa32.4■■■□□ 2.78
PTCHD3P2-201ENST00000424937 SIN3AQ96ST3 1273 aa32.38■■■□□ 2.77
PTCHD3P2-201ENST00000424937 CDC42BPGQ6DT37 1551 aa32.37■■■□□ 2.77
PTCHD3P2-201ENST00000424937 KIAA1210Q9ULL0 1709 aa32.36■■■□□ 2.77
PTCHD3P2-201ENST00000424937 PLEKHH1Q9ULM0 1364 aa32.34■■■□□ 2.77
PTCHD3P2-201ENST00000424937 WAPLQ7Z5K2 1190 aa32.34■■■□□ 2.77
PTCHD3P2-201ENST00000424937 DLC1Q96QB1 1528 aa32.32■■■□□ 2.76
PTCHD3P2-201ENST00000424937 NEUROD1Q13562 356 aa32.32■■■□□ 2.76
PTCHD3P2-201ENST00000424937 AHDC1Q5TGY3 1603 aaPredicted RBP32.31■■■□□ 2.76
PTCHD3P2-201ENST00000424937 COL16A1Q07092 1604 aaPredicted RBP32.3■■■□□ 2.76
PTCHD3P2-201ENST00000424937 NHSL1Q5SYE7 1610 aa32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms