RNA–Protein interactions for RNA: ENST00000424924.5

SHANK2-206, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 6,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-206ENST00000424924 HDAC5Q9UQL6 1122 aa12.97□□□□□ -0.33
SHANK2-206ENST00000424924 JPH4Q96JJ6 628 aa12.96□□□□□ -0.33
SHANK2-206ENST00000424924 SMARCA2P51531 1590 aa12.96□□□□□ -0.33
SHANK2-206ENST00000424924 HMOX1P09601 288 aa12.96□□□□□ -0.33
SHANK2-206ENST00000424924 OSCARQ8IYS5 282 aa12.96□□□□□ -0.33
SHANK2-206ENST00000424924 CHMP4AQ9BY43 222 aa12.96□□□□□ -0.33
SHANK2-206ENST00000424924 BCL11BQ9C0K0 894 aaPredicted RBP12.95□□□□□ -0.34
SHANK2-206ENST00000424924 NEUROD6Q96NK8 337 aa12.95□□□□□ -0.34
SHANK2-206ENST00000424924 PANK3Q9H999 370 aa12.95□□□□□ -0.34
SHANK2-206ENST00000424924 ANO2Q9NQ90 1003 aa12.94□□□□□ -0.34
SHANK2-206ENST00000424924 SYAP1Q96A49 352 aaPredicted RBP12.94□□□□□ -0.34
SHANK2-206ENST00000424924 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
SHANK2-206ENST00000424924 RAPGEF4Q8WZA2 1011 aa12.93□□□□□ -0.34
SHANK2-206ENST00000424924 DIAPH3Q9NSV4 1193 aa12.93□□□□□ -0.34
SHANK2-206ENST00000424924 TRIM29Q14134 588 aa12.93□□□□□ -0.34
SHANK2-206ENST00000424924 RIC3Q7Z5B4 369 aa12.93□□□□□ -0.34
SHANK2-206ENST00000424924 ATP2B2Q01814 1243 aa12.93□□□□□ -0.34
SHANK2-206ENST00000424924 TSR1Q2NL82 804 aaKnown RBP12.93□□□□□ -0.34
SHANK2-206ENST00000424924 GOLGA6L1Q8N7Z2 621 aa12.93□□□□□ -0.34
SHANK2-206ENST00000424924 ESCO1Q5FWF5 840 aa12.93□□□□□ -0.34
SHANK2-206ENST00000424924 IFIT2P09913 472 aaKnown RBP12.93□□□□□ -0.34
SHANK2-206ENST00000424924 TPM2P07951 284 aa12.92□□□□□ -0.34
SHANK2-206ENST00000424924 PAF1Q8N7H5 531 aa12.92□□□□□ -0.34
SHANK2-206ENST00000424924 CHMP4CQ96CF2 233 aa12.92□□□□□ -0.34
SHANK2-206ENST00000424924 FHOD3Q2V2M9 1422 aa12.92□□□□□ -0.34
SHANK2-206ENST00000424924 PRDM2Q13029 1718 aa12.92□□□□□ -0.34
SHANK2-206ENST00000424924 RALBP1Q15311 655 aa12.91□□□□□ -0.34
SHANK2-206ENST00000424924 RUSC2Q8N2Y8 1516 aa12.91□□□□□ -0.34
SHANK2-206ENST00000424924 TOP2AP11388 1531 aaKnown RBP12.9□□□□□ -0.34
SHANK2-206ENST00000424924 ERICH2A1L162 156 aa12.9□□□□□ -0.34
SHANK2-206ENST00000424924 FKBP5Q13451 457 aaPredicted RBP12.9□□□□□ -0.34
SHANK2-206ENST00000424924 CSPP1Q1MSJ5 1256 aa12.9□□□□□ -0.34
SHANK2-206ENST00000424924 WASHC4Q2M389 1173 aa12.9□□□□□ -0.34
SHANK2-206ENST00000424924 EVC2Q86UK5 1308 aa12.9□□□□□ -0.34
SHANK2-206ENST00000424924 ZFYVE27Q5T4F4 411 aa12.9□□□□□ -0.34
SHANK2-206ENST00000424924 RBM5P52756 815 aaKnown RBP eCLIP12.9□□□□□ -0.34
SHANK2-206ENST00000424924 PAXIP1Q6ZW49 1069 aaPredicted RBP12.9□□□□□ -0.34
SHANK2-206ENST00000424924 L3MBTL2Q969R5 705 aa12.9□□□□□ -0.34
SHANK2-206ENST00000424924 ST18O60284 1047 aa12.89□□□□□ -0.35
SHANK2-206ENST00000424924 DDX54Q8TDD1 881 aaKnown RBP12.89□□□□□ -0.35
SHANK2-206ENST00000424924 TSPYL4Q9UJ04 414 aa12.89□□□□□ -0.35
SHANK2-206ENST00000424924 CPLX1O14810 134 aa12.88□□□□□ -0.35
SHANK2-206ENST00000424924 R3HCC1Q9Y3T6 440 aaKnown RBP12.88□□□□□ -0.35
SHANK2-206ENST00000424924 RAPGEF2Q9Y4G8 1499 aa12.88□□□□□ -0.35
SHANK2-206ENST00000424924 VGFO15240 615 aaPredicted RBP12.88□□□□□ -0.35
SHANK2-206ENST00000424924 G3BP1Q13283 466 aaKnown RBP eCLIP12.88□□□□□ -0.35
SHANK2-206ENST00000424924 TRDNQ13061 729 aa12.88□□□□□ -0.35
SHANK2-206ENST00000424924 ST20-MTHFSA0A0A6YYL1 179 aa12.87□□□□□ -0.35
SHANK2-206ENST00000424924 CHMP4BP1P59074 171 aa12.87□□□□□ -0.35
SHANK2-206ENST00000424924 DDX58O95786 925 aaKnown RBP12.87□□□□□ -0.35
SHANK2-206ENST00000424924 DEKP35659 375 aaKnown RBP12.87□□□□□ -0.35
SHANK2-206ENST00000424924 MYCNP04198 464 aaPredicted RBP12.86□□□□□ -0.35
SHANK2-206ENST00000424924 NAP1L1P55209 391 aaKnown RBP12.86□□□□□ -0.35
SHANK2-206ENST00000424924 KIF3AQ9Y496 699 aa12.86□□□□□ -0.35
SHANK2-206ENST00000424924 CGNL1Q0VF96 1302 aa12.86□□□□□ -0.35
SHANK2-206ENST00000424924 PROSER2Q86WR7 435 aaPredicted RBP12.86□□□□□ -0.35
SHANK2-206ENST00000424924 ZNF592Q92610 1267 aa12.86□□□□□ -0.35
SHANK2-206ENST00000424924 TNNT3P45378 269 aaPredicted RBP12.86□□□□□ -0.35
SHANK2-206ENST00000424924 RIPK4P57078 832 aa12.86□□□□□ -0.35
SHANK2-206ENST00000424924 ABTB2Q8N961 1025 aa12.86□□□□□ -0.35
SHANK2-206ENST00000424924 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
SHANK2-206ENST00000424924 XPCQ01831 940 aaPredicted RBP12.85□□□□□ -0.35
SHANK2-206ENST00000424924 GOLGA6L19H0YKK7 550 aa12.85□□□□□ -0.35
SHANK2-206ENST00000424924 CT47A1Q5JQC4 288 aaPredicted RBP12.85□□□□□ -0.35
SHANK2-206ENST00000424924 BICDL1Q6ZP65 573 aa12.85□□□□□ -0.35
SHANK2-206ENST00000424924 ODF2Q5BJF6 829 aa12.85□□□□□ -0.35
SHANK2-206ENST00000424924 RRP12Q5JTH9 1297 aaKnown RBP12.85□□□□□ -0.35
SHANK2-206ENST00000424924 TMEM132EQ6IEE7 984 aa12.84□□□□□ -0.35
SHANK2-206ENST00000424924 COG6Q9Y2V7 657 aa12.84□□□□□ -0.35
SHANK2-206ENST00000424924 BECN2A8MW95 431 aa12.84□□□□□ -0.35
SHANK2-206ENST00000424924 DIAPH1O60610 1272 aaKnown RBP12.84□□□□□ -0.35
SHANK2-206ENST00000424924 NLRP6P59044 892 aa12.84□□□□□ -0.35
SHANK2-206ENST00000424924 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
SHANK2-206ENST00000424924 CCDC144AA2RUR9 1427 aa12.84□□□□□ -0.35
SHANK2-206ENST00000424924 KIF6Q6ZMV9 814 aa12.83□□□□□ -0.36
SHANK2-206ENST00000424924 LRRFIP1Q32MZ4 808 aaKnown RBP12.83□□□□□ -0.36
SHANK2-206ENST00000424924 CPLX2Q6PUV4 134 aaKnown RBP12.82□□□□□ -0.36
SHANK2-206ENST00000424924 SPINK5Q9NQ38 1064 aaPredicted RBP12.82□□□□□ -0.36
SHANK2-206ENST00000424924 TPM1P09493 284 aa12.82□□□□□ -0.36
SHANK2-206ENST00000424924 FAM161AQ3B820 660 aa12.82□□□□□ -0.36
SHANK2-206ENST00000424924 DNAJC2Q99543 621 aaKnown RBP12.82□□□□□ -0.36
SHANK2-206ENST00000424924 GGNBP2Q9H3C7 697 aa12.82□□□□□ -0.36
SHANK2-206ENST00000424924 CCDC47Q96A33 483 aaKnown RBP12.81□□□□□ -0.36
SHANK2-206ENST00000424924 WWC2Q6AWC2 1192 aa12.81□□□□□ -0.36
SHANK2-206ENST00000424924 GOLGA6L3A6NEY3 463 aa12.81□□□□□ -0.36
SHANK2-206ENST00000424924 TOM1L2Q6ZVM7 507 aa12.81□□□□□ -0.36
SHANK2-206ENST00000424924 ATP2B1P20020 1258 aa12.81□□□□□ -0.36
SHANK2-206ENST00000424924 EPS15P42566 896 aa12.81□□□□□ -0.36
SHANK2-206ENST00000424924 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.81□□□□□ -0.36
SHANK2-206ENST00000424924 SKIDA1Q1XH10 827 aa12.8□□□□□ -0.36
SHANK2-206ENST00000424924 CCDC18Q5T9S5 1454 aa12.8□□□□□ -0.36
SHANK2-206ENST00000424924 APAF1O14727 1248 aa12.8□□□□□ -0.36
SHANK2-206ENST00000424924 PTPRGP23470 1445 aa12.8□□□□□ -0.36
SHANK2-206ENST00000424924 FMN1Q68DA7 1419 aa12.8□□□□□ -0.36
SHANK2-206ENST00000424924 VPS37CA5D8V6 355 aaPredicted RBP12.8□□□□□ -0.36
SHANK2-206ENST00000424924 BICD2Q8TD16 824 aa12.8□□□□□ -0.36
SHANK2-206ENST00000424924 ZNF219Q9P2Y4 722 aaPredicted RBP12.8□□□□□ -0.36
SHANK2-206ENST00000424924 PTMSP20962 102 aa12.79□□□□□ -0.36
SHANK2-206ENST00000424924 CCER2I3L3R5 266 aa12.79□□□□□ -0.36
SHANK2-206ENST00000424924 PPM1FP49593 454 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms