RNA–Protein interactions for RNA: ENST00000424894.1

PRDM1-204, Transcript of PR/SET domain 1, humanhuman

TSL 5

Gene PRDM1, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-204ENST00000424894 NRXN3Q9Y4C0 1643 aa10.75□□□□□ -0.69
PRDM1-204ENST00000424894 RIMS2Q9UQ26 1411 aa10.75□□□□□ -0.69
PRDM1-204ENST00000424894 TRPM2O94759 1503 aa10.74□□□□□ -0.69
PRDM1-204ENST00000424894 SLC26A8Q96RN1 970 aa10.74□□□□□ -0.69
PRDM1-204ENST00000424894 CHD2O14647 1828 aaKnown RBP10.74□□□□□ -0.69
PRDM1-204ENST00000424894 LRRC7Q96NW7 1537 aa10.73□□□□□ -0.69
PRDM1-204ENST00000424894 PPLO60437 1756 aa10.72□□□□□ -0.69
PRDM1-204ENST00000424894 NEXMIFQ5QGS0 1516 aa10.72□□□□□ -0.69
PRDM1-204ENST00000424894 CPS1P31327 1500 aa10.71□□□□□ -0.69
PRDM1-204ENST00000424894 IFT172Q9UG01 1749 aa10.71□□□□□ -0.69
PRDM1-204ENST00000424894 SETD1AO15047 1707 aaKnown RBP10.7□□□□□ -0.7
PRDM1-204ENST00000424894 NWD1Q149M9 1564 aa10.7□□□□□ -0.7
PRDM1-204ENST00000424894 RAB3GAP2Q9H2M9 1393 aa10.7□□□□□ -0.7
PRDM1-204ENST00000424894 BCANQ96GW7 911 aa10.7□□□□□ -0.7
PRDM1-204ENST00000424894 SLC52A1Q9NWF4 448 aa10.7□□□□□ -0.7
PRDM1-204ENST00000424894 SETD5Q9C0A6 1442 aa10.69□□□□□ -0.7
PRDM1-204ENST00000424894 SLC4A1APQ9BWU0 796 aaKnown RBP10.69□□□□□ -0.7
PRDM1-204ENST00000424894 EID1Q9Y6B2 187 aa10.69□□□□□ -0.7
PRDM1-204ENST00000424894 SCAF1Q9H7N4 1312 aaKnown RBP10.68□□□□□ -0.7
PRDM1-204ENST00000424894 UBAP1LF5GYI3 381 aa10.68□□□□□ -0.7
PRDM1-204ENST00000424894 PIP4K2BP78356 416 aa10.68□□□□□ -0.7
PRDM1-204ENST00000424894 IQSEC2Q5JU85 1478 aa10.68□□□□□ -0.7
PRDM1-204ENST00000424894 ADAMTS13Q76LX8 1427 aa10.67□□□□□ -0.7
PRDM1-204ENST00000424894 PPP1R15AO75807 674 aaPredicted RBP10.67□□□□□ -0.7
PRDM1-204ENST00000424894 PLEKHG1Q9ULL1 1385 aa10.66□□□□□ -0.7
PRDM1-204ENST00000424894 ZNF326Q5BKZ1 582 aaKnown RBP10.66□□□□□ -0.7
PRDM1-204ENST00000424894 XRN1Q8IZH2 1706 aaKnown RBP10.66□□□□□ -0.7
PRDM1-204ENST00000424894 PTPRUQ92729 1446 aa10.66□□□□□ -0.7
PRDM1-204ENST00000424894 MPHOSPH9Q99550 1183 aa10.65□□□□□ -0.7
PRDM1-204ENST00000424894 SETBP1Q9Y6X0 1596 aa10.65□□□□□ -0.71
PRDM1-204ENST00000424894 NALCNQ8IZF0 1738 aa10.64□□□□□ -0.71
PRDM1-204ENST00000424894 ROBO1Q9Y6N7 1651 aa10.63□□□□□ -0.71
PRDM1-204ENST00000424894 DIP2AQ14689 1571 aa10.63□□□□□ -0.71
PRDM1-204ENST00000424894 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.63□□□□□ -0.71
PRDM1-204ENST00000424894 TMEM94Q12767 1356 aa10.63□□□□□ -0.71
PRDM1-204ENST00000424894 METP08581 1390 aa10.62□□□□□ -0.71
PRDM1-204ENST00000424894 KCNA6P17658 529 aa10.61□□□□□ -0.71
PRDM1-204ENST00000424894 RGL3Q3MIN7 710 aa10.61□□□□□ -0.71
PRDM1-204ENST00000424894 NKTRP30414 1462 aaKnown RBP10.61□□□□□ -0.71
PRDM1-204ENST00000424894 SPATA31E1Q6ZUB1 1445 aa10.6□□□□□ -0.71
PRDM1-204ENST00000424894 ASXL1Q8IXJ9 1541 aa10.6□□□□□ -0.71
PRDM1-204ENST00000424894 HSPA1LP34931 641 aa10.6□□□□□ -0.71
PRDM1-204ENST00000424894 PROSER2Q86WR7 435 aaPredicted RBP10.6□□□□□ -0.71
PRDM1-204ENST00000424894 CCDC144AA2RUR9 1427 aa10.59□□□□□ -0.71
PRDM1-204ENST00000424894 ADGRF5Q8IZF2 1346 aa10.58□□□□□ -0.72
PRDM1-204ENST00000424894 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.57□□□□□ -0.72
PRDM1-204ENST00000424894 PHLPP1O60346 1717 aa10.57□□□□□ -0.72
PRDM1-204ENST00000424894 AMOTL2Q9Y2J4 779 aa10.56□□□□□ -0.72
PRDM1-204ENST00000424894 TBX22Q9Y458 520 aa10.56□□□□□ -0.72
PRDM1-204ENST00000424894 TOM1O60784 492 aa10.54□□□□□ -0.72
PRDM1-204ENST00000424894 MED1Q15648 1581 aaPredicted RBP10.54□□□□□ -0.72
PRDM1-204ENST00000424894 RGPD8O14715 1765 aaPredicted RBP10.54□□□□□ -0.72
PRDM1-204ENST00000424894 ANKRD30BQ9BXX2 1392 aa10.53□□□□□ -0.72
PRDM1-204ENST00000424894 ROBO2Q9HCK4 1378 aa10.53□□□□□ -0.72
PRDM1-204ENST00000424894 HDGFP51858 240 aaKnown RBP10.53□□□□□ -0.72
PRDM1-204ENST00000424894 TMEM132EQ6IEE7 984 aa10.53□□□□□ -0.72
PRDM1-204ENST00000424894 C14orf37Q86TY3 774 aa10.53□□□□□ -0.72
PRDM1-204ENST00000424894 KNDC1Q76NI1 1749 aa10.53□□□□□ -0.72
PRDM1-204ENST00000424894 MSH6P52701 1360 aa10.52□□□□□ -0.73
PRDM1-204ENST00000424894 COL16A1Q07092 1604 aaPredicted RBP10.51□□□□□ -0.73
PRDM1-204ENST00000424894 PIK3C2GO75747 1445 aa10.51□□□□□ -0.73
PRDM1-204ENST00000424894 STK26Q9P289 416 aa10.51□□□□□ -0.73
PRDM1-204ENST00000424894 DISP3Q9P2K9 1392 aa10.51□□□□□ -0.73
PRDM1-204ENST00000424894 PLEKHH1Q9ULM0 1364 aa10.51□□□□□ -0.73
PRDM1-204ENST00000424894 NHSL1Q5SYE7 1610 aa10.5□□□□□ -0.73
PRDM1-204ENST00000424894 PIK3R4Q99570 1358 aa10.5□□□□□ -0.73
PRDM1-204ENST00000424894 LAMC1P11047 1609 aa10.49□□□□□ -0.73
PRDM1-204ENST00000424894 VGFO15240 615 aaPredicted RBP10.49□□□□□ -0.73
PRDM1-204ENST00000424894 DDX17Q92841 729 aaKnown RBP10.49□□□□□ -0.73
PRDM1-204ENST00000424894 KDM2AQ9Y2K7 1162 aa10.49□□□□□ -0.73
PRDM1-204ENST00000424894 MYOM2P54296 1465 aa10.49□□□□□ -0.73
PRDM1-204ENST00000424894 NRXN1Q9ULB1 1477 aa10.49□□□□□ -0.73
PRDM1-204ENST00000424894 CFAP70Q5T0N1 1121 aa10.48□□□□□ -0.73
PRDM1-204ENST00000424894 ILDR2Q71H61 639 aa10.48□□□□□ -0.73
PRDM1-204ENST00000424894 RPGRIP1LQ68CZ1 1315 aa10.48□□□□□ -0.73
PRDM1-204ENST00000424894 DHX57Q6P158 1386 aaKnown RBP10.48□□□□□ -0.73
PRDM1-204ENST00000424894 MST1RQ04912 1400 aa10.48□□□□□ -0.73
PRDM1-204ENST00000424894 ADGRL3Q9HAR2 1447 aa10.48□□□□□ -0.73
PRDM1-204ENST00000424894 ARHGEF28Q8N1W1 1705 aaKnown RBP10.47□□□□□ -0.73
PRDM1-204ENST00000424894 FMN2Q9NZ56 1722 aa10.47□□□□□ -0.73
PRDM1-204ENST00000424894 WAPLQ7Z5K2 1190 aa10.47□□□□□ -0.73
PRDM1-204ENST00000424894 SLAIN2Q9P270 581 aa10.47□□□□□ -0.73
PRDM1-204ENST00000424894 NUTM2FA1L443 756 aa10.46□□□□□ -0.73
PRDM1-204ENST00000424894 SIN3AQ96ST3 1273 aa10.46□□□□□ -0.73
PRDM1-204ENST00000424894 PTCH1Q13635 1447 aa10.46□□□□□ -0.74
PRDM1-204ENST00000424894 FAM135BQ49AJ0 1406 aa10.46□□□□□ -0.74
PRDM1-204ENST00000424894 ADGRB1O14514 1584 aa10.46□□□□□ -0.74
PRDM1-204ENST00000424894 AHDC1Q5TGY3 1603 aaPredicted RBP10.45□□□□□ -0.74
PRDM1-204ENST00000424894 YTHDC2Q9H6S0 1430 aaKnown RBP10.45□□□□□ -0.74
PRDM1-204ENST00000424894 SAFB2Q14151 953 aaKnown RBP eCLIP10.45□□□□□ -0.74
PRDM1-204ENST00000424894 DCAF11Q8TEB1 546 aa10.45□□□□□ -0.74
PRDM1-204ENST00000424894 USP32Q8NFA0 1604 aa10.44□□□□□ -0.74
PRDM1-204ENST00000424894 ATF3P18847 181 aa10.44□□□□□ -0.74
PRDM1-204ENST00000424894 C19orf44Q9H6X5 657 aa10.44□□□□□ -0.74
PRDM1-204ENST00000424894 SHPRHQ149N8 1683 aa10.44□□□□□ -0.74
PRDM1-204ENST00000424894 LRP6O75581 1613 aa10.44□□□□□ -0.74
PRDM1-204ENST00000424894 CDC42BPGQ6DT37 1551 aa10.43□□□□□ -0.74
PRDM1-204ENST00000424894 BRINP3Q76B58 766 aa10.43□□□□□ -0.74
PRDM1-204ENST00000424894 NCOA3Q9Y6Q9 1424 aa10.42□□□□□ -0.74
PRDM1-204ENST00000424894 LRPPRCP42704 1394 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms