RNA–Protein interactions for RNA: ENST00000424536.2

GRAMD1A-203, Transcript of GRAM domain containing 1A, humanhuman

TSL 2 BASIC

Gene GRAMD1A, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-203ENST00000424536 RIMS2Q9UQ26 1411 aa20.51■□□□□ 0.87
GRAMD1A-203ENST00000424536 SLC4A1APQ9BWU0 796 aaKnown RBP20.5■□□□□ 0.87
GRAMD1A-203ENST00000424536 PLEKHG1Q9ULL1 1385 aa20.47■□□□□ 0.87
GRAMD1A-203ENST00000424536 ZFYVE9O95405 1425 aa20.47■□□□□ 0.87
GRAMD1A-203ENST00000424536 MYO5BQ9ULV0 1848 aa20.47■□□□□ 0.87
GRAMD1A-203ENST00000424536 KCNA6P17658 529 aa20.45■□□□□ 0.86
GRAMD1A-203ENST00000424536 SLC26A8Q96RN1 970 aa20.45■□□□□ 0.86
GRAMD1A-203ENST00000424536 ZNF326Q5BKZ1 582 aaKnown RBP20.44■□□□□ 0.86
GRAMD1A-203ENST00000424536 TRPM2O94759 1503 aa20.43■□□□□ 0.86
GRAMD1A-203ENST00000424536 LRRC7Q96NW7 1537 aa20.43■□□□□ 0.86
GRAMD1A-203ENST00000424536 TBX22Q9Y458 520 aa20.41■□□□□ 0.86
GRAMD1A-203ENST00000424536 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
GRAMD1A-203ENST00000424536 STRCP1A6NGW2 1772 aa20.41■□□□□ 0.86
GRAMD1A-203ENST00000424536 KIF1BO60333 1816 aa20.4■□□□□ 0.86
GRAMD1A-203ENST00000424536 SETD5Q9C0A6 1442 aa20.4■□□□□ 0.86
GRAMD1A-203ENST00000424536 DIP2AQ14689 1571 aa20.38■□□□□ 0.85
GRAMD1A-203ENST00000424536 PROSER2Q86WR7 435 aaPredicted RBP20.38■□□□□ 0.85
GRAMD1A-203ENST00000424536 NKTRP30414 1462 aaKnown RBP20.37■□□□□ 0.85
GRAMD1A-203ENST00000424536 PIP4K2BP78356 416 aa20.37■□□□□ 0.85
GRAMD1A-203ENST00000424536 CLTCL1P53675 1640 aa20.37■□□□□ 0.85
GRAMD1A-203ENST00000424536 PIK3R4Q99570 1358 aa20.36■□□□□ 0.85
GRAMD1A-203ENST00000424536 NUTM2DQ5VT03 806 aaPredicted RBP20.36■□□□□ 0.85
GRAMD1A-203ENST00000424536 MPHOSPH9Q99550 1183 aa20.36■□□□□ 0.85
GRAMD1A-203ENST00000424536 NWD1Q149M9 1564 aa20.34■□□□□ 0.85
GRAMD1A-203ENST00000424536 RPGRIP1LQ68CZ1 1315 aa20.33■□□□□ 0.85
GRAMD1A-203ENST00000424536 VGFO15240 615 aaPredicted RBP20.33■□□□□ 0.85
GRAMD1A-203ENST00000424536 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.85
GRAMD1A-203ENST00000424536 TMEM94Q12767 1356 aa20.33■□□□□ 0.84
GRAMD1A-203ENST00000424536 CHD2O14647 1828 aaKnown RBP20.32■□□□□ 0.84
GRAMD1A-203ENST00000424536 CCDC144AA2RUR9 1427 aa20.31■□□□□ 0.84
GRAMD1A-203ENST00000424536 ADAMTS13Q76LX8 1427 aa20.3■□□□□ 0.84
GRAMD1A-203ENST00000424536 NCOA3Q9Y6Q9 1424 aa20.29■□□□□ 0.84
GRAMD1A-203ENST00000424536 MSH6P52701 1360 aa20.29■□□□□ 0.84
GRAMD1A-203ENST00000424536 RAB3GAP2Q9H2M9 1393 aa20.28■□□□□ 0.84
GRAMD1A-203ENST00000424536 SETBP1Q9Y6X0 1596 aa20.28■□□□□ 0.84
GRAMD1A-203ENST00000424536 HRCP23327 699 aa20.27■□□□□ 0.84
GRAMD1A-203ENST00000424536 NEXMIFQ5QGS0 1516 aa20.27■□□□□ 0.83
GRAMD1A-203ENST00000424536 XIRP1Q702N8 1843 aaKnown RBP20.26■□□□□ 0.83
GRAMD1A-203ENST00000424536 FOXD1Q16676 465 aa20.26■□□□□ 0.83
GRAMD1A-203ENST00000424536 C14orf37Q86TY3 774 aa20.26■□□□□ 0.83
GRAMD1A-203ENST00000424536 AMOTL2Q9Y2J4 779 aa20.25■□□□□ 0.83
GRAMD1A-203ENST00000424536 HSPA1LP34931 641 aa20.23■□□□□ 0.83
GRAMD1A-203ENST00000424536 ALKQ9UM73 1620 aa20.21■□□□□ 0.83
GRAMD1A-203ENST00000424536 RBM33Q96EV2 1170 aaKnown RBP20.2■□□□□ 0.82
GRAMD1A-203ENST00000424536 ANKRD30BQ9BXX2 1392 aa20.2■□□□□ 0.82
GRAMD1A-203ENST00000424536 NRXN3Q9Y4C0 1643 aa20.2■□□□□ 0.82
GRAMD1A-203ENST00000424536 FAM135BQ49AJ0 1406 aa20.19■□□□□ 0.82
GRAMD1A-203ENST00000424536 RGL3Q3MIN7 710 aa20.19■□□□□ 0.82
GRAMD1A-203ENST00000424536 C19orf44Q9H6X5 657 aa20.19■□□□□ 0.82
GRAMD1A-203ENST00000424536 PPLO60437 1756 aa20.18■□□□□ 0.82
GRAMD1A-203ENST00000424536 ATF3P18847 181 aa20.18■□□□□ 0.82
GRAMD1A-203ENST00000424536 CADPS2Q86UW7 1296 aa20.18■□□□□ 0.82
GRAMD1A-203ENST00000424536 DISP3Q9P2K9 1392 aa20.17■□□□□ 0.82
GRAMD1A-203ENST00000424536 SLAIN2Q9P270 581 aa20.16■□□□□ 0.82
GRAMD1A-203ENST00000424536 METP08581 1390 aa20.16■□□□□ 0.82
GRAMD1A-203ENST00000424536 PTPRUQ92729 1446 aa20.16■□□□□ 0.82
GRAMD1A-203ENST00000424536 SPATA31E1Q6ZUB1 1445 aa20.15■□□□□ 0.82
GRAMD1A-203ENST00000424536 XRN1Q8IZH2 1706 aaKnown RBP20.14■□□□□ 0.81
GRAMD1A-203ENST00000424536 DCCP43146 1447 aa20.11■□□□□ 0.81
GRAMD1A-203ENST00000424536 ROBO1Q9Y6N7 1651 aa20.1■□□□□ 0.81
GRAMD1A-203ENST00000424536 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.1■□□□□ 0.81
GRAMD1A-203ENST00000424536 IFT172Q9UG01 1749 aa20.08■□□□□ 0.81
GRAMD1A-203ENST00000424536 STAC3Q96MF2 364 aa20.08■□□□□ 0.81
GRAMD1A-203ENST00000424536 PTCH1Q13635 1447 aa20.08■□□□□ 0.8
GRAMD1A-203ENST00000424536 ADGRF5Q8IZF2 1346 aa20.07■□□□□ 0.8
GRAMD1A-203ENST00000424536 SETD1AO15047 1707 aaKnown RBP20.07■□□□□ 0.8
GRAMD1A-203ENST00000424536 ADGRL3Q9HAR2 1447 aa20.05■□□□□ 0.8
GRAMD1A-203ENST00000424536 PRAG1Q86YV5 1406 aa20.04■□□□□ 0.8
GRAMD1A-203ENST00000424536 PIK3C2GO75747 1445 aa20.03■□□□□ 0.8
GRAMD1A-203ENST00000424536 MYOM2P54296 1465 aa20.03■□□□□ 0.8
GRAMD1A-203ENST00000424536 PHF23Q9BUL5 403 aaPredicted RBP20.02■□□□□ 0.8
GRAMD1A-203ENST00000424536 MED1Q15648 1581 aaPredicted RBP20.01■□□□□ 0.79
GRAMD1A-203ENST00000424536 LAMC1P11047 1609 aa20.01■□□□□ 0.79
GRAMD1A-203ENST00000424536 PHLPP1O60346 1717 aa20■□□□□ 0.79
GRAMD1A-203ENST00000424536 C14orf93Q9H972 538 aaKnown RBP20■□□□□ 0.79
GRAMD1A-203ENST00000424536 LRPPRCP42704 1394 aaKnown RBP19.99■□□□□ 0.79
GRAMD1A-203ENST00000424536 DHX57Q6P158 1386 aaKnown RBP19.99■□□□□ 0.79
GRAMD1A-203ENST00000424536 ROBO2Q9HCK4 1378 aa19.99■□□□□ 0.79
GRAMD1A-203ENST00000424536 ABCC11Q96J66 1382 aa19.98■□□□□ 0.79
GRAMD1A-203ENST00000424536 STK26Q9P289 416 aa19.98■□□□□ 0.79
GRAMD1A-203ENST00000424536 NALCNQ8IZF0 1738 aa19.97■□□□□ 0.79
GRAMD1A-203ENST00000424536 MST1RQ04912 1400 aa19.97■□□□□ 0.79
GRAMD1A-203ENST00000424536 NRXN1Q9ULB1 1477 aa19.97■□□□□ 0.79
GRAMD1A-203ENST00000424536 JCADQ9P266 1359 aa19.96■□□□□ 0.79
GRAMD1A-203ENST00000424536 TECPR2O15040 1411 aa19.96■□□□□ 0.79
GRAMD1A-203ENST00000424536 BRINP3Q76B58 766 aa19.96■□□□□ 0.79
GRAMD1A-203ENST00000424536 DCAF11Q8TEB1 546 aa19.96■□□□□ 0.79
GRAMD1A-203ENST00000424536 SIRT1Q96EB6 747 aa19.96■□□□□ 0.79
GRAMD1A-203ENST00000424536 TMEM132EQ6IEE7 984 aa19.95■□□□□ 0.78
GRAMD1A-203ENST00000424536 AHDC1Q5TGY3 1603 aaPredicted RBP19.94■□□□□ 0.78
GRAMD1A-203ENST00000424536 YTHDC2Q9H6S0 1430 aaKnown RBP19.94■□□□□ 0.78
GRAMD1A-203ENST00000424536 KNDC1Q76NI1 1749 aa19.94■□□□□ 0.78
GRAMD1A-203ENST00000424536 CFAP70Q5T0N1 1121 aa19.93■□□□□ 0.78
GRAMD1A-203ENST00000424536 KDM2AQ9Y2K7 1162 aa19.93■□□□□ 0.78
GRAMD1A-203ENST00000424536 ASXL1Q8IXJ9 1541 aa19.92■□□□□ 0.78
GRAMD1A-203ENST00000424536 COL16A1Q07092 1604 aaPredicted RBP19.91■□□□□ 0.78
GRAMD1A-203ENST00000424536 LRRC59Q96AG4 307 aaKnown RBP19.9■□□□□ 0.78
GRAMD1A-203ENST00000424536 SPATA31A6Q5VVP1 1343 aa19.9■□□□□ 0.78
GRAMD1A-203ENST00000424536 C1orf167Q5SNV9 1468 aa19.9■□□□□ 0.78
GRAMD1A-203ENST00000424536 CDC42BPGQ6DT37 1551 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms