RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 IQSEC2Q5JU85 1478 aa27.77■■■□□ 2.04
PRNP-202ENST00000424424 PPP1R15AO75807 674 aaPredicted RBP27.77■■■□□ 2.04
PRNP-202ENST00000424424 CPS1P31327 1500 aa27.77■■■□□ 2.04
PRNP-202ENST00000424424 BCANQ96GW7 911 aa27.76■■■□□ 2.03
PRNP-202ENST00000424424 MPHOSPH9Q99550 1183 aa27.76■■■□□ 2.03
PRNP-202ENST00000424424 ZFYVE9O95405 1425 aa27.75■■■□□ 2.03
PRNP-202ENST00000424424 RAB3GAP2Q9H2M9 1393 aa27.75■■■□□ 2.03
PRNP-202ENST00000424424 CLTCL1P53675 1640 aa27.75■■■□□ 2.03
PRNP-202ENST00000424424 ZNF326Q5BKZ1 582 aaKnown RBP27.71■■■□□ 2.03
PRNP-202ENST00000424424 PLEKHG1Q9ULL1 1385 aa27.7■■■□□ 2.02
PRNP-202ENST00000424424 FOXD1Q16676 465 aa27.69■■■□□ 2.02
PRNP-202ENST00000424424 SLC26A8Q96RN1 970 aa27.67■■■□□ 2.02
PRNP-202ENST00000424424 STRCP1A6NGW2 1772 aa27.67■■■□□ 2.02
PRNP-202ENST00000424424 HRCP23327 699 aa27.66■■■□□ 2.02
PRNP-202ENST00000424424 NUTM2DQ5VT03 806 aaPredicted RBP27.66■■■□□ 2.02
PRNP-202ENST00000424424 SENP3Q9H4L4 574 aaPredicted RBP27.63■■■□□ 2.01
PRNP-202ENST00000424424 CCDC144AA2RUR9 1427 aa27.62■■■□□ 2.01
PRNP-202ENST00000424424 DISP3Q9P2K9 1392 aa27.59■■■□□ 2.01
PRNP-202ENST00000424424 KCNA6P17658 529 aa27.58■■■□□ 2.01
PRNP-202ENST00000424424 TBX22Q9Y458 520 aa27.58■■■□□ 2.01
PRNP-202ENST00000424424 LRRC7Q96NW7 1537 aa27.57■■■□□ 2
PRNP-202ENST00000424424 DIP2AQ14689 1571 aa27.57■■■□□ 2
PRNP-202ENST00000424424 NEXMIFQ5QGS0 1516 aa27.57■■■□□ 2
PRNP-202ENST00000424424 UBAP1LF5GYI3 381 aa27.56■■■□□ 2
PRNP-202ENST00000424424 CHD2O14647 1828 aaKnown RBP27.55■■■□□ 2
PRNP-202ENST00000424424 RPGRIP1LQ68CZ1 1315 aa27.55■■■□□ 2
PRNP-202ENST00000424424 ADAMTS13Q76LX8 1427 aa27.53■■■□□ 2
PRNP-202ENST00000424424 VGFO15240 615 aaPredicted RBP27.53■■■□□ 2
PRNP-202ENST00000424424 TOM1O60784 492 aa27.52■■■□□ 2
PRNP-202ENST00000424424 ILDR2Q71H61 639 aa27.52■■■□□ 2
PRNP-202ENST00000424424 NWD1Q149M9 1564 aa27.52■■■□□ 2
PRNP-202ENST00000424424 SETBP1Q9Y6X0 1596 aa27.51■■□□□ 1.99
PRNP-202ENST00000424424 PPLO60437 1756 aa27.5■■□□□ 1.99
PRNP-202ENST00000424424 PIK3R4Q99570 1358 aa27.49■■□□□ 1.99
PRNP-202ENST00000424424 PROSER2Q86WR7 435 aaPredicted RBP27.49■■□□□ 1.99
PRNP-202ENST00000424424 NKTRP30414 1462 aaKnown RBP27.49■■□□□ 1.99
PRNP-202ENST00000424424 XIRP1Q702N8 1843 aaKnown RBP27.48■■□□□ 1.99
PRNP-202ENST00000424424 NRXN3Q9Y4C0 1643 aa27.48■■□□□ 1.99
PRNP-202ENST00000424424 RGL3Q3MIN7 710 aa27.47■■□□□ 1.99
PRNP-202ENST00000424424 SPATA31E1Q6ZUB1 1445 aa27.44■■□□□ 1.98
PRNP-202ENST00000424424 TMEM94Q12767 1356 aa27.43■■□□□ 1.98
PRNP-202ENST00000424424 SOCS7O14512 581 aa27.42■■□□□ 1.98
PRNP-202ENST00000424424 SCAF1Q9H7N4 1312 aaKnown RBP27.41■■□□□ 1.98
PRNP-202ENST00000424424 ANKRD30BQ9BXX2 1392 aa27.41■■□□□ 1.98
PRNP-202ENST00000424424 IFT172Q9UG01 1749 aa27.41■■□□□ 1.98
PRNP-202ENST00000424424 PIP4K2BP78356 416 aa27.39■■□□□ 1.98
PRNP-202ENST00000424424 AMOTL2Q9Y2J4 779 aa27.39■■□□□ 1.98
PRNP-202ENST00000424424 TRIM26Q12899 539 aaPredicted RBP27.37■■□□□ 1.97
PRNP-202ENST00000424424 RBM33Q96EV2 1170 aaKnown RBP27.36■■□□□ 1.97
PRNP-202ENST00000424424 PTPRUQ92729 1446 aa27.35■■□□□ 1.97
PRNP-202ENST00000424424 METP08581 1390 aa27.35■■□□□ 1.97
PRNP-202ENST00000424424 ALKQ9UM73 1620 aa27.34■■□□□ 1.97
PRNP-202ENST00000424424 MSH6P52701 1360 aa27.34■■□□□ 1.97
PRNP-202ENST00000424424 NCOA3Q9Y6Q9 1424 aa27.33■■□□□ 1.97
PRNP-202ENST00000424424 XRN1Q8IZH2 1706 aaKnown RBP27.33■■□□□ 1.97
PRNP-202ENST00000424424 SETD1AO15047 1707 aaKnown RBP27.33■■□□□ 1.96
PRNP-202ENST00000424424 C14orf37Q86TY3 774 aa27.32■■□□□ 1.96
PRNP-202ENST00000424424 ADGRF5Q8IZF2 1346 aa27.32■■□□□ 1.96
PRNP-202ENST00000424424 MYOM2P54296 1465 aa27.25■■□□□ 1.95
PRNP-202ENST00000424424 C19orf44Q9H6X5 657 aa27.24■■□□□ 1.95
PRNP-202ENST00000424424 PIK3C2GO75747 1445 aa27.24■■□□□ 1.95
PRNP-202ENST00000424424 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.22■■□□□ 1.95
PRNP-202ENST00000424424 STAC3Q96MF2 364 aa27.21■■□□□ 1.95
PRNP-202ENST00000424424 ATF3P18847 181 aa27.2■■□□□ 1.94
PRNP-202ENST00000424424 CADPS2Q86UW7 1296 aa27.2■■□□□ 1.94
PRNP-202ENST00000424424 LAMC1P11047 1609 aa27.19■■□□□ 1.94
PRNP-202ENST00000424424 HSPA1LP34931 641 aa27.19■■□□□ 1.94
PRNP-202ENST00000424424 DCAF11Q8TEB1 546 aa27.19■■□□□ 1.94
PRNP-202ENST00000424424 NRXN1Q9ULB1 1477 aa27.19■■□□□ 1.94
PRNP-202ENST00000424424 PTCH1Q13635 1447 aa27.18■■□□□ 1.94
PRNP-202ENST00000424424 SLAIN2Q9P270 581 aa27.18■■□□□ 1.94
PRNP-202ENST00000424424 FAM135BQ49AJ0 1406 aa27.17■■□□□ 1.94
PRNP-202ENST00000424424 KDM2AQ9Y2K7 1162 aa27.17■■□□□ 1.94
PRNP-202ENST00000424424 C14orf93Q9H972 538 aaKnown RBP27.16■■□□□ 1.94
PRNP-202ENST00000424424 PRAG1Q86YV5 1406 aa27.16■■□□□ 1.94
PRNP-202ENST00000424424 DCCP43146 1447 aa27.15■■□□□ 1.94
PRNP-202ENST00000424424 ROBO1Q9Y6N7 1651 aa27.14■■□□□ 1.94
PRNP-202ENST00000424424 TMEM132EQ6IEE7 984 aa27.13■■□□□ 1.93
PRNP-202ENST00000424424 ROBO2Q9HCK4 1378 aa27.12■■□□□ 1.93
PRNP-202ENST00000424424 CFAP70Q5T0N1 1121 aa27.12■■□□□ 1.93
PRNP-202ENST00000424424 STK26Q9P289 416 aa27.12■■□□□ 1.93
PRNP-202ENST00000424424 ADGRL3Q9HAR2 1447 aa27.12■■□□□ 1.93
PRNP-202ENST00000424424 NALCNQ8IZF0 1738 aa27.12■■□□□ 1.93
PRNP-202ENST00000424424 LRPPRCP42704 1394 aaKnown RBP27.11■■□□□ 1.93
PRNP-202ENST00000424424 KNDC1Q76NI1 1749 aa27.11■■□□□ 1.93
PRNP-202ENST00000424424 DHX57Q6P158 1386 aaKnown RBP27.1■■□□□ 1.93
PRNP-202ENST00000424424 ASXL1Q8IXJ9 1541 aa27.1■■□□□ 1.93
PRNP-202ENST00000424424 ABCC11Q96J66 1382 aa27.09■■□□□ 1.93
PRNP-202ENST00000424424 YTHDC2Q9H6S0 1430 aaKnown RBP27.08■■□□□ 1.93
PRNP-202ENST00000424424 TECPR2O15040 1411 aa27.07■■□□□ 1.92
PRNP-202ENST00000424424 MED1Q15648 1581 aaPredicted RBP27.02■■□□□ 1.92
PRNP-202ENST00000424424 SIRT1Q96EB6 747 aa27.02■■□□□ 1.92
PRNP-202ENST00000424424 SIN3AQ96ST3 1273 aa27.02■■□□□ 1.92
PRNP-202ENST00000424424 WAPLQ7Z5K2 1190 aa27.01■■□□□ 1.91
PRNP-202ENST00000424424 PHLPP1O60346 1717 aa27.01■■□□□ 1.91
PRNP-202ENST00000424424 MST1RQ04912 1400 aa27■■□□□ 1.91
PRNP-202ENST00000424424 NEUROD1Q13562 356 aa27■■□□□ 1.91
PRNP-202ENST00000424424 ADGRB1O14514 1584 aa26.97■■□□□ 1.91
PRNP-202ENST00000424424 BRINP3Q76B58 766 aa26.96■■□□□ 1.91
PRNP-202ENST00000424424 KIAA1210Q9ULL0 1709 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms