RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 BCANQ96GW7 911 aa18.25■□□□□ 0.51
PLOD3-204ENST00000424135 NWD1Q149M9 1564 aa18.25■□□□□ 0.51
PLOD3-204ENST00000424135 ROBO1Q9Y6N7 1651 aa18.25■□□□□ 0.51
PLOD3-204ENST00000424135 POTEAQ6S8J7 498 aa18.24■□□□□ 0.51
PLOD3-204ENST00000424135 MYO5BQ9ULV0 1848 aa18.23■□□□□ 0.51
PLOD3-204ENST00000424135 RIMS2Q9UQ26 1411 aa18.23■□□□□ 0.51
PLOD3-204ENST00000424135 NUTM2DQ5VT03 806 aaPredicted RBP18.22■□□□□ 0.51
PLOD3-204ENST00000424135 NKTRP30414 1462 aaKnown RBP18.21■□□□□ 0.51
PLOD3-204ENST00000424135 RPRD2Q5VT52 1461 aaKnown RBP18.21■□□□□ 0.51
PLOD3-204ENST00000424135 TMEM131LA2VDJ0 1609 aa18.2■□□□□ 0.5
PLOD3-204ENST00000424135 PLEKHG1Q9ULL1 1385 aa18.2■□□□□ 0.5
PLOD3-204ENST00000424135 GCC2Q8IWJ2 1684 aa18.19■□□□□ 0.5
PLOD3-204ENST00000424135 SLAIN2Q9P270 581 aa18.19■□□□□ 0.5
PLOD3-204ENST00000424135 PPP1R15AO75807 674 aaPredicted RBP18.18■□□□□ 0.5
PLOD3-204ENST00000424135 CHGAP10645 457 aaKnown RBP18.18■□□□□ 0.5
PLOD3-204ENST00000424135 MSH6P52701 1360 aa18.17■□□□□ 0.5
PLOD3-204ENST00000424135 UNC13BO14795 1591 aa18.17■□□□□ 0.5
PLOD3-204ENST00000424135 ADAMTS13Q76LX8 1427 aa18.16■□□□□ 0.5
PLOD3-204ENST00000424135 CHD2O14647 1828 aaKnown RBP18.16■□□□□ 0.5
PLOD3-204ENST00000424135 TBX22Q9Y458 520 aa18.15■□□□□ 0.5
PLOD3-204ENST00000424135 E9PCH4 1651 aa18.15■□□□□ 0.5
PLOD3-204ENST00000424135 PPARGC1BQ86YN6 1023 aaKnown RBP18.12■□□□□ 0.49
PLOD3-204ENST00000424135 PHLPP1O60346 1717 aa18.12■□□□□ 0.49
PLOD3-204ENST00000424135 ITGAEP38570 1179 aa18.11■□□□□ 0.49
PLOD3-204ENST00000424135 PTPRUQ92729 1446 aa18.1■□□□□ 0.49
PLOD3-204ENST00000424135 ROCK1Q13464 1354 aa18.1■□□□□ 0.49
PLOD3-204ENST00000424135 COL16A1Q07092 1604 aaPredicted RBP18.09■□□□□ 0.49
PLOD3-204ENST00000424135 IQGAP3Q86VI3 1631 aa18.09■□□□□ 0.49
PLOD3-204ENST00000424135 NUP155O75694 1391 aa18.09■□□□□ 0.49
PLOD3-204ENST00000424135 JCADQ9P266 1359 aa18.09■□□□□ 0.49
PLOD3-204ENST00000424135 HDGFP51858 240 aaKnown RBP18.09■□□□□ 0.49
PLOD3-204ENST00000424135 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.09■□□□□ 0.49
PLOD3-204ENST00000424135 C14orf37Q86TY3 774 aa18.08■□□□□ 0.48
PLOD3-204ENST00000424135 LRP6O75581 1613 aa18.08■□□□□ 0.48
PLOD3-204ENST00000424135 AMOTL2Q9Y2J4 779 aa18.06■□□□□ 0.48
PLOD3-204ENST00000424135 SETD1AO15047 1707 aaKnown RBP18.06■□□□□ 0.48
PLOD3-204ENST00000424135 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.06■□□□□ 0.48
PLOD3-204ENST00000424135 NCOA3Q9Y6Q9 1424 aa18.05■□□□□ 0.48
PLOD3-204ENST00000424135 C19orf44Q9H6X5 657 aa18.04■□□□□ 0.48
PLOD3-204ENST00000424135 DIP2AQ14689 1571 aa18.03■□□□□ 0.48
PLOD3-204ENST00000424135 PIK3R4Q99570 1358 aa18.03■□□□□ 0.48
PLOD3-204ENST00000424135 NRXN3Q9Y4C0 1643 aa18.02■□□□□ 0.48
PLOD3-204ENST00000424135 ATF3P18847 181 aa18.02■□□□□ 0.48
PLOD3-204ENST00000424135 CADPS2Q86UW7 1296 aa18.02■□□□□ 0.48
PLOD3-204ENST00000424135 BRINP3Q76B58 766 aa18.01■□□□□ 0.47
PLOD3-204ENST00000424135 AHDC1Q5TGY3 1603 aaPredicted RBP18.01■□□□□ 0.47
PLOD3-204ENST00000424135 TRPM2O94759 1503 aa18■□□□□ 0.47
PLOD3-204ENST00000424135 METP08581 1390 aa18■□□□□ 0.47
PLOD3-204ENST00000424135 SPATA31A6Q5VVP1 1343 aa17.98■□□□□ 0.47
PLOD3-204ENST00000424135 XRN1Q8IZH2 1706 aaKnown RBP17.97■□□□□ 0.47
PLOD3-204ENST00000424135 SETBP1Q9Y6X0 1596 aa17.96■□□□□ 0.47
PLOD3-204ENST00000424135 ZNF326Q5BKZ1 582 aaKnown RBP17.96■□□□□ 0.47
PLOD3-204ENST00000424135 MEX3CQ5U5Q3 659 aaKnown RBP17.96■□□□□ 0.47
PLOD3-204ENST00000424135 DDX17Q92841 729 aaKnown RBP17.96■□□□□ 0.47
PLOD3-204ENST00000424135 NUTM2BA6NNL0 878 aaPredicted RBP17.95■□□□□ 0.46
PLOD3-204ENST00000424135 NUTM2EB1AL46 878 aaPredicted RBP17.95■□□□□ 0.46
PLOD3-204ENST00000424135 NUTM2AQ8IVF1 878 aaPredicted RBP17.95■□□□□ 0.46
PLOD3-204ENST00000424135 TRIM52Q96A61 297 aa17.95■□□□□ 0.46
PLOD3-204ENST00000424135 MST1RQ04912 1400 aa17.95■□□□□ 0.46
PLOD3-204ENST00000424135 SPHKAPQ2M3C7 1700 aa17.95■□□□□ 0.46
PLOD3-204ENST00000424135 SHPRHQ149N8 1683 aa17.94■□□□□ 0.46
PLOD3-204ENST00000424135 ASXL1Q8IXJ9 1541 aa17.93■□□□□ 0.46
PLOD3-204ENST00000424135 CLTCL1P53675 1640 aa17.93■□□□□ 0.46
PLOD3-204ENST00000424135 NEXMIFQ5QGS0 1516 aa17.91■□□□□ 0.46
PLOD3-204ENST00000424135 DCCP43146 1447 aa17.9■□□□□ 0.46
PLOD3-204ENST00000424135 ZNF772Q68DY9 489 aaPredicted RBP17.9■□□□□ 0.46
PLOD3-204ENST00000424135 UPF1Q92900 1129 aaKnown RBP eCLIP17.9■□□□□ 0.46
PLOD3-204ENST00000424135 SETD5Q9C0A6 1442 aa17.89■□□□□ 0.45
PLOD3-204ENST00000424135 NAIPQ13075 1403 aa17.88■□□□□ 0.45
PLOD3-204ENST00000424135 ADGRL3Q9HAR2 1447 aa17.88■□□□□ 0.45
PLOD3-204ENST00000424135 NHSL1Q5SYE7 1610 aa17.87■□□□□ 0.45
PLOD3-204ENST00000424135 AFF2P51816 1311 aa17.87■□□□□ 0.45
PLOD3-204ENST00000424135 NALCNQ8IZF0 1738 aa17.86■□□□□ 0.45
PLOD3-204ENST00000424135 RXRBP28702 533 aa17.85■□□□□ 0.45
PLOD3-204ENST00000424135 RRBP1Q9P2E9 1410 aaKnown RBP17.84■□□□□ 0.45
PLOD3-204ENST00000424135 PNPLA6Q8IY17 1366 aa17.84■□□□□ 0.45
PLOD3-204ENST00000424135 ROBO2Q9HCK4 1378 aa17.84■□□□□ 0.45
PLOD3-204ENST00000424135 LRRC59Q96AG4 307 aaKnown RBP17.83■□□□□ 0.44
PLOD3-204ENST00000424135 C8orf37Q96NL8 207 aa17.83■□□□□ 0.44
PLOD3-204ENST00000424135 C1orf167Q5SNV9 1468 aa17.82■□□□□ 0.44
PLOD3-204ENST00000424135 ORAI2Q96SN7 254 aa17.82■□□□□ 0.44
PLOD3-204ENST00000424135 ADAMTS2O95450 1211 aa17.79■□□□□ 0.44
PLOD3-204ENST00000424135 FOXD1Q16676 465 aa17.79■□□□□ 0.44
PLOD3-204ENST00000424135 KIF1BO60333 1816 aa17.79■□□□□ 0.44
PLOD3-204ENST00000424135 QTRT2Q9H974 415 aaKnown RBP17.78■□□□□ 0.44
PLOD3-204ENST00000424135 RGS12O14924 1447 aa17.78■□□□□ 0.44
PLOD3-204ENST00000424135 PTCH1Q13635 1447 aa17.78■□□□□ 0.44
PLOD3-204ENST00000424135 CDK12Q9NYV4 1490 aaPredicted RBP17.77■□□□□ 0.44
PLOD3-204ENST00000424135 VGFO15240 615 aaPredicted RBP17.76■□□□□ 0.43
PLOD3-204ENST00000424135 SOS2Q07890 1332 aaPredicted RBP17.75■□□□□ 0.43
PLOD3-204ENST00000424135 SLC4A1APQ9BWU0 796 aaKnown RBP17.75■□□□□ 0.43
PLOD3-204ENST00000424135 HFM1A2PYH4 1435 aa17.74■□□□□ 0.43
PLOD3-204ENST00000424135 NGLY1Q96IV0 654 aa17.74■□□□□ 0.43
PLOD3-204ENST00000424135 LAMC1P11047 1609 aa17.73■□□□□ 0.43
PLOD3-204ENST00000424135 RBM6P78332 1123 aaKnown RBP17.73■□□□□ 0.43
PLOD3-204ENST00000424135 PRAG1Q86YV5 1406 aa17.72■□□□□ 0.43
PLOD3-204ENST00000424135 SRCAPQ6ZRS2 3230 aa17.72■□□□□ 0.43
PLOD3-204ENST00000424135 RPGRIP1LQ68CZ1 1315 aa17.72■□□□□ 0.43
PLOD3-204ENST00000424135 ADGRF5Q8IZF2 1346 aa17.72■□□□□ 0.43
PLOD3-204ENST00000424135 PPLO60437 1756 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms