RNA–Protein interactions for RNA: ENST00000423717.1

EPDR1-202, Transcript of ependymin related 1, humanhuman

TSL 1 (best) BASIC

Gene EPDR1, Length 638 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-202ENST00000423717 NUTM2DQ5VT03 806 aaPredicted RBP33.31■■■□□ 2.92
EPDR1-202ENST00000423717 BCANQ96GW7 911 aa33.31■■■□□ 2.92
EPDR1-202ENST00000423717 RIMS2Q9UQ26 1411 aa33.3■■■□□ 2.92
EPDR1-202ENST00000423717 HDGFP51858 240 aaKnown RBP33.3■■■□□ 2.92
EPDR1-202ENST00000423717 IQGAP1P46940 1657 aa33.28■■■□□ 2.92
EPDR1-202ENST00000423717 MED14O60244 1454 aa33.25■■■□□ 2.91
EPDR1-202ENST00000423717 PCGF6Q9BYE7 350 aa33.25■■■□□ 2.91
EPDR1-202ENST00000423717 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.24■■■□□ 2.91
EPDR1-202ENST00000423717 ZFYVE9O95405 1425 aa33.22■■■□□ 2.91
EPDR1-202ENST00000423717 RGL3Q3MIN7 710 aa33.2■■■□□ 2.91
EPDR1-202ENST00000423717 ANKRD30BQ9BXX2 1392 aa33.17■■■□□ 2.9
EPDR1-202ENST00000423717 ZNF335Q9H4Z2 1342 aaPredicted RBP33.16■■■□□ 2.9
EPDR1-202ENST00000423717 SLC26A8Q96RN1 970 aa33.14■■■□□ 2.9
EPDR1-202ENST00000423717 PLEKHG1Q9ULL1 1385 aa33.12■■■□□ 2.89
EPDR1-202ENST00000423717 NEXMIFQ5QGS0 1516 aa33.11■■■□□ 2.89
EPDR1-202ENST00000423717 RPGRIP1LQ68CZ1 1315 aa33.08■■■□□ 2.89
EPDR1-202ENST00000423717 SPATA31E1Q6ZUB1 1445 aa33.06■■■□□ 2.88
EPDR1-202ENST00000423717 PPLO60437 1756 aa33.05■■■□□ 2.88
EPDR1-202ENST00000423717 VGFO15240 615 aaPredicted RBP33.04■■■□□ 2.88
EPDR1-202ENST00000423717 DHX57Q6P158 1386 aaKnown RBP33.04■■■□□ 2.88
EPDR1-202ENST00000423717 CERKQ8TCT0 537 aa33.01■■■□□ 2.87
EPDR1-202ENST00000423717 LTBP4Q8N2S1 1624 aa33.01■■■□□ 2.87
EPDR1-202ENST00000423717 TBX22Q9Y458 520 aa32.96■■■□□ 2.87
EPDR1-202ENST00000423717 IFT172Q9UG01 1749 aa32.96■■■□□ 2.87
EPDR1-202ENST00000423717 ADAMTS13Q76LX8 1427 aa32.95■■■□□ 2.87
EPDR1-202ENST00000423717 STRCP1A6NGW2 1772 aa32.94■■■□□ 2.86
EPDR1-202ENST00000423717 ADGRF5Q8IZF2 1346 aa32.93■■■□□ 2.86
EPDR1-202ENST00000423717 DIP2AQ14689 1571 aa32.92■■■□□ 2.86
EPDR1-202ENST00000423717 SETBP1Q9Y6X0 1596 aa32.92■■■□□ 2.86
EPDR1-202ENST00000423717 NRXN3Q9Y4C0 1643 aa32.92■■■□□ 2.86
EPDR1-202ENST00000423717 NEUROD1Q13562 356 aa32.92■■■□□ 2.86
EPDR1-202ENST00000423717 SIN3AQ96ST3 1273 aa32.92■■■□□ 2.86
EPDR1-202ENST00000423717 KDM2AQ9Y2K7 1162 aa32.92■■■□□ 2.86
EPDR1-202ENST00000423717 CPS1P31327 1500 aa32.92■■■□□ 2.86
EPDR1-202ENST00000423717 KCNA6P17658 529 aa32.9■■■□□ 2.86
EPDR1-202ENST00000423717 DCAF11Q8TEB1 546 aa32.89■■■□□ 2.86
EPDR1-202ENST00000423717 CHD2O14647 1828 aaKnown RBP32.86■■■□□ 2.85
EPDR1-202ENST00000423717 ALKQ9UM73 1620 aa32.83■■■□□ 2.85
EPDR1-202ENST00000423717 PROSER2Q86WR7 435 aaPredicted RBP32.82■■■□□ 2.84
EPDR1-202ENST00000423717 METP08581 1390 aa32.82■■■□□ 2.84
EPDR1-202ENST00000423717 PIK3R4Q99570 1358 aa32.81■■■□□ 2.84
EPDR1-202ENST00000423717 AMOTL2Q9Y2J4 779 aa32.8■■■□□ 2.84
EPDR1-202ENST00000423717 LRRC7Q96NW7 1537 aa32.8■■■□□ 2.84
EPDR1-202ENST00000423717 MYOM2P54296 1465 aa32.8■■■□□ 2.84
EPDR1-202ENST00000423717 NWD1Q149M9 1564 aa32.79■■■□□ 2.84
EPDR1-202ENST00000423717 RBM33Q96EV2 1170 aaKnown RBP32.79■■■□□ 2.84
EPDR1-202ENST00000423717 PTPRUQ92729 1446 aa32.77■■■□□ 2.84
EPDR1-202ENST00000423717 PIK3C2GO75747 1445 aa32.76■■■□□ 2.83
EPDR1-202ENST00000423717 SETD1AO15047 1707 aaKnown RBP32.75■■■□□ 2.83
EPDR1-202ENST00000423717 NKTRP30414 1462 aaKnown RBP32.74■■■□□ 2.83
EPDR1-202ENST00000423717 IQSEC2Q5JU85 1478 aa32.74■■■□□ 2.83
EPDR1-202ENST00000423717 CFAP70Q5T0N1 1121 aa32.72■■■□□ 2.83
EPDR1-202ENST00000423717 TMEM94Q12767 1356 aa32.71■■■□□ 2.83
EPDR1-202ENST00000423717 STAC3Q96MF2 364 aa32.71■■■□□ 2.83
EPDR1-202ENST00000423717 NRXN1Q9ULB1 1477 aa32.7■■■□□ 2.83
EPDR1-202ENST00000423717 TMEM132EQ6IEE7 984 aa32.7■■■□□ 2.83
EPDR1-202ENST00000423717 C14orf37Q86TY3 774 aa32.7■■■□□ 2.83
EPDR1-202ENST00000423717 UBAP1LF5GYI3 381 aa32.69■■■□□ 2.82
EPDR1-202ENST00000423717 L3MBTL2Q969R5 705 aa32.69■■■□□ 2.82
EPDR1-202ENST00000423717 STK26Q9P289 416 aa32.69■■■□□ 2.82
EPDR1-202ENST00000423717 XIRP1Q702N8 1843 aaKnown RBP32.69■■■□□ 2.82
EPDR1-202ENST00000423717 FBXO41Q8TF61 875 aa32.68■■■□□ 2.82
EPDR1-202ENST00000423717 C14orf93Q9H972 538 aaKnown RBP32.68■■■□□ 2.82
EPDR1-202ENST00000423717 XRN1Q8IZH2 1706 aaKnown RBP32.67■■■□□ 2.82
EPDR1-202ENST00000423717 CCER1Q8TC90 406 aaPredicted RBP32.66■■■□□ 2.82
EPDR1-202ENST00000423717 LAMC1P11047 1609 aa32.66■■■□□ 2.82
EPDR1-202ENST00000423717 TONSLQ96HA7 1378 aa32.63■■■□□ 2.81
EPDR1-202ENST00000423717 SCAF1Q9H7N4 1312 aaKnown RBP32.61■■■□□ 2.81
EPDR1-202ENST00000423717 TOM1O60784 492 aa32.6■■■□□ 2.81
EPDR1-202ENST00000423717 ASXL1Q8IXJ9 1541 aa32.6■■■□□ 2.81
EPDR1-202ENST00000423717 MSH6P52701 1360 aa32.58■■■□□ 2.81
EPDR1-202ENST00000423717 ILDR1Q86SU0 546 aaPredicted RBP32.58■■■□□ 2.81
EPDR1-202ENST00000423717 PIP4K2BP78356 416 aa32.57■■■□□ 2.8
EPDR1-202ENST00000423717 YTHDC2Q9H6S0 1430 aaKnown RBP32.56■■■□□ 2.8
EPDR1-202ENST00000423717 LRPPRCP42704 1394 aaKnown RBP32.56■■■□□ 2.8
EPDR1-202ENST00000423717 ROBO2Q9HCK4 1378 aa32.55■■■□□ 2.8
EPDR1-202ENST00000423717 PRAG1Q86YV5 1406 aa32.54■■■□□ 2.8
EPDR1-202ENST00000423717 PTCH1Q13635 1447 aa32.52■■■□□ 2.8
EPDR1-202ENST00000423717 NCOA3Q9Y6Q9 1424 aa32.51■■■□□ 2.8
EPDR1-202ENST00000423717 CLSPNQ9HAW4 1339 aa32.5■■■□□ 2.79
EPDR1-202ENST00000423717 KNDC1Q76NI1 1749 aa32.49■■■□□ 2.79
EPDR1-202ENST00000423717 ABCC11Q96J66 1382 aa32.49■■■□□ 2.79
EPDR1-202ENST00000423717 WAPLQ7Z5K2 1190 aa32.49■■■□□ 2.79
EPDR1-202ENST00000423717 C19orf44Q9H6X5 657 aa32.49■■■□□ 2.79
EPDR1-202ENST00000423717 TRAK1Q9UPV9 953 aa32.49■■■□□ 2.79
EPDR1-202ENST00000423717 ATF3P18847 181 aa32.48■■■□□ 2.79
EPDR1-202ENST00000423717 ADGRB1O14514 1584 aa32.47■■■□□ 2.79
EPDR1-202ENST00000423717 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.47■■■□□ 2.79
EPDR1-202ENST00000423717 KIAA1210Q9ULL0 1709 aa32.47■■■□□ 2.79
EPDR1-202ENST00000423717 NBPF1Q3BBV0 1214 aa32.45■■■□□ 2.79
EPDR1-202ENST00000423717 TECPR2O15040 1411 aa32.44■■■□□ 2.78
EPDR1-202ENST00000423717 NALCNQ8IZF0 1738 aa32.43■■■□□ 2.78
EPDR1-202ENST00000423717 SAFB2Q14151 953 aaKnown RBP eCLIP32.43■■■□□ 2.78
EPDR1-202ENST00000423717 POGKQ9P215 609 aa32.43■■■□□ 2.78
EPDR1-202ENST00000423717 CADPS2Q86UW7 1296 aa32.42■■■□□ 2.78
EPDR1-202ENST00000423717 PLEKHH1Q9ULM0 1364 aa32.42■■■□□ 2.78
EPDR1-202ENST00000423717 ADGRL3Q9HAR2 1447 aa32.42■■■□□ 2.78
EPDR1-202ENST00000423717 PRAM1Q96QH2 718 aa32.41■■■□□ 2.78
EPDR1-202ENST00000423717 NBPF8Q3BBV2 869 aa32.4■■■□□ 2.78
EPDR1-202ENST00000423717 TRPM1Q7Z4N2 1603 aa32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms