RNA–Protein interactions for RNA: ENST00000423692.5

SRRT-201, Transcript of serrate, RNA effector molecule, humanhuman

TSL 5

Gene SRRT, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-201ENST00000423692 SLC26A8Q96RN1 970 aa22.49■■□□□ 1.19
SRRT-201ENST00000423692 PLEKHG1Q9ULL1 1385 aa22.48■■□□□ 1.19
SRRT-201ENST00000423692 RIMS2Q9UQ26 1411 aa22.48■■□□□ 1.19
SRRT-201ENST00000423692 HDGFP51858 240 aaKnown RBP22.47■■□□□ 1.19
SRRT-201ENST00000423692 XIRP1Q702N8 1843 aaKnown RBP22.46■■□□□ 1.19
SRRT-201ENST00000423692 TMEM94Q12767 1356 aa22.44■■□□□ 1.18
SRRT-201ENST00000423692 NWD1Q149M9 1564 aa22.44■■□□□ 1.18
SRRT-201ENST00000423692 MYO5BQ9ULV0 1848 aa22.43■■□□□ 1.18
SRRT-201ENST00000423692 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.43■■□□□ 1.18
SRRT-201ENST00000423692 NKTRP30414 1462 aaKnown RBP22.42■■□□□ 1.18
SRRT-201ENST00000423692 PPP1R15AO75807 674 aaPredicted RBP22.4■■□□□ 1.18
SRRT-201ENST00000423692 PROSER2Q86WR7 435 aaPredicted RBP22.4■■□□□ 1.18
SRRT-201ENST00000423692 TBX22Q9Y458 520 aa22.4■■□□□ 1.18
SRRT-201ENST00000423692 CHGAP10645 457 aaKnown RBP22.39■■□□□ 1.17
SRRT-201ENST00000423692 BCANQ96GW7 911 aa22.39■■□□□ 1.17
SRRT-201ENST00000423692 NAIPQ13075 1403 aa22.39■■□□□ 1.17
SRRT-201ENST00000423692 FAM135BQ49AJ0 1406 aa22.38■■□□□ 1.17
SRRT-201ENST00000423692 MED1Q15648 1581 aaPredicted RBP22.38■■□□□ 1.17
SRRT-201ENST00000423692 SOCS7O14512 581 aa22.37■■□□□ 1.17
SRRT-201ENST00000423692 ADAMTS13Q76LX8 1427 aa22.36■■□□□ 1.17
SRRT-201ENST00000423692 CHD2O14647 1828 aaKnown RBP22.34■■□□□ 1.17
SRRT-201ENST00000423692 DIP2AQ14689 1571 aa22.33■■□□□ 1.17
SRRT-201ENST00000423692 PIK3R4Q99570 1358 aa22.33■■□□□ 1.17
SRRT-201ENST00000423692 SPHKAPQ2M3C7 1700 aa22.32■■□□□ 1.16
SRRT-201ENST00000423692 RBM33Q96EV2 1170 aaKnown RBP22.32■■□□□ 1.16
SRRT-201ENST00000423692 HFM1A2PYH4 1435 aa22.31■■□□□ 1.16
SRRT-201ENST00000423692 NCOA3Q9Y6Q9 1424 aa22.31■■□□□ 1.16
SRRT-201ENST00000423692 NUTM2DQ5VT03 806 aaPredicted RBP22.31■■□□□ 1.16
SRRT-201ENST00000423692 SENP3Q9H4L4 574 aaPredicted RBP22.31■■□□□ 1.16
SRRT-201ENST00000423692 MSH6P52701 1360 aa22.29■■□□□ 1.16
SRRT-201ENST00000423692 TRPM2O94759 1503 aa22.27■■□□□ 1.16
SRRT-201ENST00000423692 SLAIN2Q9P270 581 aa22.24■■□□□ 1.15
SRRT-201ENST00000423692 SETBP1Q9Y6X0 1596 aa22.24■■□□□ 1.15
SRRT-201ENST00000423692 CLTCL1P53675 1640 aa22.24■■□□□ 1.15
SRRT-201ENST00000423692 ROBO1Q9Y6N7 1651 aa22.23■■□□□ 1.15
SRRT-201ENST00000423692 PTPRUQ92729 1446 aa22.23■■□□□ 1.15
SRRT-201ENST00000423692 NRXN3Q9Y4C0 1643 aa22.22■■□□□ 1.15
SRRT-201ENST00000423692 ZNF326Q5BKZ1 582 aaKnown RBP22.21■■□□□ 1.15
SRRT-201ENST00000423692 AMOTL2Q9Y2J4 779 aa22.21■■□□□ 1.15
SRRT-201ENST00000423692 TRIM52Q96A61 297 aa22.2■■□□□ 1.14
SRRT-201ENST00000423692 NEXMIFQ5QGS0 1516 aa22.2■■□□□ 1.14
SRRT-201ENST00000423692 C19orf44Q9H6X5 657 aa22.19■■□□□ 1.14
SRRT-201ENST00000423692 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
SRRT-201ENST00000423692 CADPS2Q86UW7 1296 aa22.16■■□□□ 1.14
SRRT-201ENST00000423692 SLC4A1APQ9BWU0 796 aaKnown RBP22.16■■□□□ 1.14
SRRT-201ENST00000423692 XRN1Q8IZH2 1706 aaKnown RBP22.15■■□□□ 1.14
SRRT-201ENST00000423692 METP08581 1390 aa22.14■■□□□ 1.14
SRRT-201ENST00000423692 C14orf37Q86TY3 774 aa22.14■■□□□ 1.13
SRRT-201ENST00000423692 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.14■■□□□ 1.13
SRRT-201ENST00000423692 KIF1BO60333 1816 aa22.13■■□□□ 1.13
SRRT-201ENST00000423692 ATF3P18847 181 aa22.12■■□□□ 1.13
SRRT-201ENST00000423692 DCCP43146 1447 aa22.12■■□□□ 1.13
SRRT-201ENST00000423692 RPGRIP1LQ68CZ1 1315 aa22.11■■□□□ 1.13
SRRT-201ENST00000423692 RGS17Q9UGC6 210 aaPredicted RBP22.11■■□□□ 1.13
SRRT-201ENST00000423692 VGFO15240 615 aaPredicted RBP22.1■■□□□ 1.13
SRRT-201ENST00000423692 PHLPP1O60346 1717 aa22.09■■□□□ 1.13
SRRT-201ENST00000423692 JCADQ9P266 1359 aa22.08■■□□□ 1.12
SRRT-201ENST00000423692 COL16A1Q07092 1604 aaPredicted RBP22.07■■□□□ 1.12
SRRT-201ENST00000423692 AHDC1Q5TGY3 1603 aaPredicted RBP22.06■■□□□ 1.12
SRRT-201ENST00000423692 PRAG1Q86YV5 1406 aa22.04■■□□□ 1.12
SRRT-201ENST00000423692 FOXD1Q16676 465 aa22.03■■□□□ 1.12
SRRT-201ENST00000423692 BRINP3Q76B58 766 aa22.03■■□□□ 1.12
SRRT-201ENST00000423692 MPHOSPH9Q99550 1183 aa22.03■■□□□ 1.12
SRRT-201ENST00000423692 ADGRL3Q9HAR2 1447 aa22.03■■□□□ 1.12
SRRT-201ENST00000423692 ACIN1Q9UKV3 1341 aaKnown RBP22.03■■□□□ 1.12
SRRT-201ENST00000423692 SETD1AO15047 1707 aaKnown RBP22.03■■□□□ 1.12
SRRT-201ENST00000423692 MST1RQ04912 1400 aa22.02■■□□□ 1.12
SRRT-201ENST00000423692 PTCH1Q13635 1447 aa22.02■■□□□ 1.12
SRRT-201ENST00000423692 PPLO60437 1756 aa22■■□□□ 1.11
SRRT-201ENST00000423692 CCDC144AA2RUR9 1427 aa22■■□□□ 1.11
SRRT-201ENST00000423692 SPATA31E1Q6ZUB1 1445 aa21.99■■□□□ 1.11
SRRT-201ENST00000423692 SPATA31A6Q5VVP1 1343 aa21.98■■□□□ 1.11
SRRT-201ENST00000423692 ASXL1Q8IXJ9 1541 aa21.97■■□□□ 1.11
SRRT-201ENST00000423692 ROBO2Q9HCK4 1378 aa21.97■■□□□ 1.11
SRRT-201ENST00000423692 SETD5Q9C0A6 1442 aa21.97■■□□□ 1.11
SRRT-201ENST00000423692 POTEAQ6S8J7 498 aa21.96■■□□□ 1.11
SRRT-201ENST00000423692 NALCNQ8IZF0 1738 aa21.95■■□□□ 1.1
SRRT-201ENST00000423692 SHPRHQ149N8 1683 aa21.95■■□□□ 1.1
SRRT-201ENST00000423692 ADGRF5Q8IZF2 1346 aa21.94■■□□□ 1.1
SRRT-201ENST00000423692 LRP6O75581 1613 aa21.93■■□□□ 1.1
SRRT-201ENST00000423692 ANKRD30BQ9BXX2 1392 aa21.93■■□□□ 1.1
SRRT-201ENST00000423692 NHSL1Q5SYE7 1610 aa21.92■■□□□ 1.1
SRRT-201ENST00000423692 C1orf167Q5SNV9 1468 aa21.9■■□□□ 1.1
SRRT-201ENST00000423692 RGL3Q3MIN7 710 aa21.9■■□□□ 1.1
SRRT-201ENST00000423692 IFT172Q9UG01 1749 aa21.89■■□□□ 1.1
SRRT-201ENST00000423692 LRRC59Q96AG4 307 aaKnown RBP21.87■■□□□ 1.09
SRRT-201ENST00000423692 TECPR2O15040 1411 aa21.87■■□□□ 1.09
SRRT-201ENST00000423692 RAB3GAP2Q9H2M9 1393 aa21.87■■□□□ 1.09
SRRT-201ENST00000423692 LAMC1P11047 1609 aa21.86■■□□□ 1.09
SRRT-201ENST00000423692 PIK3C2GO75747 1445 aa21.86■■□□□ 1.09
SRRT-201ENST00000423692 LRPPRCP42704 1394 aaKnown RBP21.85■■□□□ 1.09
SRRT-201ENST00000423692 ABCC11Q96J66 1382 aa21.84■■□□□ 1.09
SRRT-201ENST00000423692 MEX3CQ5U5Q3 659 aaKnown RBP21.83■■□□□ 1.09
SRRT-201ENST00000423692 DDX17Q92841 729 aaKnown RBP21.83■■□□□ 1.09
SRRT-201ENST00000423692 ORAI2Q96SN7 254 aa21.82■■□□□ 1.08
SRRT-201ENST00000423692 NRXN1Q9ULB1 1477 aa21.82■■□□□ 1.08
SRRT-201ENST00000423692 CDC42BPGQ6DT37 1551 aa21.82■■□□□ 1.08
SRRT-201ENST00000423692 ZNF772Q68DY9 489 aaPredicted RBP21.81■■□□□ 1.08
SRRT-201ENST00000423692 PNPLA6Q8IY17 1366 aa21.81■■□□□ 1.08
SRRT-201ENST00000423692 SOS2Q07890 1332 aaPredicted RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms