RNA–Protein interactions for RNA: ENST00000422453.6

CNBP-201, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNBP, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-201ENST00000422453 MYO5BQ9ULV0 1848 aa20.8■□□□□ 0.92
CNBP-201ENST00000422453 SLC26A8Q96RN1 970 aa20.8■□□□□ 0.92
CNBP-201ENST00000422453 SENP3Q9H4L4 574 aaPredicted RBP20.79■□□□□ 0.92
CNBP-201ENST00000422453 ZFYVE9O95405 1425 aa20.78■□□□□ 0.92
CNBP-201ENST00000422453 ZNF326Q5BKZ1 582 aaKnown RBP20.77■□□□□ 0.92
CNBP-201ENST00000422453 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.92
CNBP-201ENST00000422453 NUTM2DQ5VT03 806 aaPredicted RBP20.77■□□□□ 0.91
CNBP-201ENST00000422453 SETD5Q9C0A6 1442 aa20.75■□□□□ 0.91
CNBP-201ENST00000422453 PLEKHG1Q9ULL1 1385 aa20.75■□□□□ 0.91
CNBP-201ENST00000422453 TOM1O60784 492 aa20.75■□□□□ 0.91
CNBP-201ENST00000422453 TRPM2O94759 1503 aa20.73■□□□□ 0.91
CNBP-201ENST00000422453 KCNA6P17658 529 aa20.72■□□□□ 0.91
CNBP-201ENST00000422453 MPHOSPH9Q99550 1183 aa20.72■□□□□ 0.91
CNBP-201ENST00000422453 LRRC7Q96NW7 1537 aa20.72■□□□□ 0.91
CNBP-201ENST00000422453 SCAF1Q9H7N4 1312 aaKnown RBP20.71■□□□□ 0.91
CNBP-201ENST00000422453 STRCP1A6NGW2 1772 aa20.71■□□□□ 0.91
CNBP-201ENST00000422453 FOXD1Q16676 465 aa20.7■□□□□ 0.9
CNBP-201ENST00000422453 CLTCL1P53675 1640 aa20.69■□□□□ 0.9
CNBP-201ENST00000422453 PIP4K2BP78356 416 aa20.69■□□□□ 0.9
CNBP-201ENST00000422453 TBX22Q9Y458 520 aa20.69■□□□□ 0.9
CNBP-201ENST00000422453 PROSER2Q86WR7 435 aaPredicted RBP20.67■□□□□ 0.9
CNBP-201ENST00000422453 RAB3GAP2Q9H2M9 1393 aa20.67■□□□□ 0.9
CNBP-201ENST00000422453 KIF1BO60333 1816 aa20.66■□□□□ 0.9
CNBP-201ENST00000422453 CCDC144AA2RUR9 1427 aa20.63■□□□□ 0.89
CNBP-201ENST00000422453 TMEM94Q12767 1356 aa20.62■□□□□ 0.89
CNBP-201ENST00000422453 ADAMTS13Q76LX8 1427 aa20.62■□□□□ 0.89
CNBP-201ENST00000422453 VGFO15240 615 aaPredicted RBP20.61■□□□□ 0.89
CNBP-201ENST00000422453 DIP2AQ14689 1571 aa20.61■□□□□ 0.89
CNBP-201ENST00000422453 NKTRP30414 1462 aaKnown RBP20.61■□□□□ 0.89
CNBP-201ENST00000422453 RBM33Q96EV2 1170 aaKnown RBP20.61■□□□□ 0.89
CNBP-201ENST00000422453 RPGRIP1LQ68CZ1 1315 aa20.6■□□□□ 0.89
CNBP-201ENST00000422453 PIK3R4Q99570 1358 aa20.6■□□□□ 0.89
CNBP-201ENST00000422453 NWD1Q149M9 1564 aa20.59■□□□□ 0.89
CNBP-201ENST00000422453 NEXMIFQ5QGS0 1516 aa20.58■□□□□ 0.89
CNBP-201ENST00000422453 CHD2O14647 1828 aaKnown RBP20.58■□□□□ 0.89
CNBP-201ENST00000422453 RGL3Q3MIN7 710 aa20.57■□□□□ 0.88
CNBP-201ENST00000422453 HRCP23327 699 aa20.56■□□□□ 0.88
CNBP-201ENST00000422453 C14orf37Q86TY3 774 aa20.56■□□□□ 0.88
CNBP-201ENST00000422453 AMOTL2Q9Y2J4 779 aa20.56■□□□□ 0.88
CNBP-201ENST00000422453 SETBP1Q9Y6X0 1596 aa20.56■□□□□ 0.88
CNBP-201ENST00000422453 MSH6P52701 1360 aa20.55■□□□□ 0.88
CNBP-201ENST00000422453 XIRP1Q702N8 1843 aaKnown RBP20.54■□□□□ 0.88
CNBP-201ENST00000422453 HSPA1LP34931 641 aa20.53■□□□□ 0.88
CNBP-201ENST00000422453 ALKQ9UM73 1620 aa20.52■□□□□ 0.87
CNBP-201ENST00000422453 NRXN3Q9Y4C0 1643 aa20.52■□□□□ 0.87
CNBP-201ENST00000422453 METP08581 1390 aa20.5■□□□□ 0.87
CNBP-201ENST00000422453 PTPRUQ92729 1446 aa20.49■□□□□ 0.87
CNBP-201ENST00000422453 NCOA3Q9Y6Q9 1424 aa20.49■□□□□ 0.87
CNBP-201ENST00000422453 SPATA31E1Q6ZUB1 1445 aa20.48■□□□□ 0.87
CNBP-201ENST00000422453 ANKRD30BQ9BXX2 1392 aa20.48■□□□□ 0.87
CNBP-201ENST00000422453 PPLO60437 1756 aa20.47■□□□□ 0.87
CNBP-201ENST00000422453 C19orf44Q9H6X5 657 aa20.46■□□□□ 0.87
CNBP-201ENST00000422453 ATF3P18847 181 aa20.45■□□□□ 0.86
CNBP-201ENST00000422453 SLAIN2Q9P270 581 aa20.45■□□□□ 0.86
CNBP-201ENST00000422453 ADGRF5Q8IZF2 1346 aa20.44■□□□□ 0.86
CNBP-201ENST00000422453 FAM135BQ49AJ0 1406 aa20.44■□□□□ 0.86
CNBP-201ENST00000422453 CADPS2Q86UW7 1296 aa20.44■□□□□ 0.86
CNBP-201ENST00000422453 XRN1Q8IZH2 1706 aaKnown RBP20.42■□□□□ 0.86
CNBP-201ENST00000422453 DISP3Q9P2K9 1392 aa20.41■□□□□ 0.86
CNBP-201ENST00000422453 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.37■□□□□ 0.85
CNBP-201ENST00000422453 IFT172Q9UG01 1749 aa20.37■□□□□ 0.85
CNBP-201ENST00000422453 ROBO1Q9Y6N7 1651 aa20.37■□□□□ 0.85
CNBP-201ENST00000422453 SETD1AO15047 1707 aaKnown RBP20.36■□□□□ 0.85
CNBP-201ENST00000422453 PTCH1Q13635 1447 aa20.35■□□□□ 0.85
CNBP-201ENST00000422453 STK26Q9P289 416 aa20.35■□□□□ 0.85
CNBP-201ENST00000422453 PIK3C2GO75747 1445 aa20.34■□□□□ 0.85
CNBP-201ENST00000422453 DCCP43146 1447 aa20.34■□□□□ 0.85
CNBP-201ENST00000422453 ROBO2Q9HCK4 1378 aa20.34■□□□□ 0.85
CNBP-201ENST00000422453 TMEM132EQ6IEE7 984 aa20.32■□□□□ 0.84
CNBP-201ENST00000422453 KDM2AQ9Y2K7 1162 aa20.32■□□□□ 0.84
CNBP-201ENST00000422453 ADGRL3Q9HAR2 1447 aa20.32■□□□□ 0.84
CNBP-201ENST00000422453 MYOM2P54296 1465 aa20.32■□□□□ 0.84
CNBP-201ENST00000422453 DCAF11Q8TEB1 546 aa20.32■□□□□ 0.84
CNBP-201ENST00000422453 C14orf93Q9H972 538 aaKnown RBP20.31■□□□□ 0.84
CNBP-201ENST00000422453 PRAG1Q86YV5 1406 aa20.3■□□□□ 0.84
CNBP-201ENST00000422453 CFAP70Q5T0N1 1121 aa20.29■□□□□ 0.84
CNBP-201ENST00000422453 STAC3Q96MF2 364 aa20.29■□□□□ 0.84
CNBP-201ENST00000422453 LRPPRCP42704 1394 aaKnown RBP20.29■□□□□ 0.84
CNBP-201ENST00000422453 NRXN1Q9ULB1 1477 aa20.28■□□□□ 0.84
CNBP-201ENST00000422453 DHX57Q6P158 1386 aaKnown RBP20.27■□□□□ 0.84
CNBP-201ENST00000422453 ABCC11Q96J66 1382 aa20.27■□□□□ 0.84
CNBP-201ENST00000422453 TRIM26Q12899 539 aaPredicted RBP20.26■□□□□ 0.83
CNBP-201ENST00000422453 BRINP3Q76B58 766 aa20.26■□□□□ 0.83
CNBP-201ENST00000422453 NALCNQ8IZF0 1738 aa20.26■□□□□ 0.83
CNBP-201ENST00000422453 PHF23Q9BUL5 403 aaPredicted RBP20.26■□□□□ 0.83
CNBP-201ENST00000422453 MST1RQ04912 1400 aa20.26■□□□□ 0.83
CNBP-201ENST00000422453 YTHDC2Q9H6S0 1430 aaKnown RBP20.26■□□□□ 0.83
CNBP-201ENST00000422453 PHLPP1O60346 1717 aa20.25■□□□□ 0.83
CNBP-201ENST00000422453 MED1Q15648 1581 aaPredicted RBP20.25■□□□□ 0.83
CNBP-201ENST00000422453 WAPLQ7Z5K2 1190 aa20.25■□□□□ 0.83
CNBP-201ENST00000422453 TECPR2O15040 1411 aa20.24■□□□□ 0.83
CNBP-201ENST00000422453 LAMC1P11047 1609 aa20.24■□□□□ 0.83
CNBP-201ENST00000422453 ASXL1Q8IXJ9 1541 aa20.23■□□□□ 0.83
CNBP-201ENST00000422453 JCADQ9P266 1359 aa20.21■□□□□ 0.83
CNBP-201ENST00000422453 SIRT1Q96EB6 747 aa20.2■□□□□ 0.82
CNBP-201ENST00000422453 C1orf167Q5SNV9 1468 aa20.19■□□□□ 0.82
CNBP-201ENST00000422453 KNDC1Q76NI1 1749 aa20.19■□□□□ 0.82
CNBP-201ENST00000422453 AHDC1Q5TGY3 1603 aaPredicted RBP20.19■□□□□ 0.82
CNBP-201ENST00000422453 PLEKHH1Q9ULM0 1364 aa20.18■□□□□ 0.82
CNBP-201ENST00000422453 POGKQ9P215 609 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms