RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 SCAF1Q9H7N4 1312 aaKnown RBP12.95□□□□□ -0.34
MDC1-204ENST00000422266 LRRC7Q96NW7 1537 aa12.95□□□□□ -0.34
MDC1-204ENST00000422266 TRIM52Q96A61 297 aa12.95□□□□□ -0.34
MDC1-204ENST00000422266 ZFYVE9O95405 1425 aa12.95□□□□□ -0.34
MDC1-204ENST00000422266 TMEM131LA2VDJ0 1609 aa12.95□□□□□ -0.34
MDC1-204ENST00000422266 SLC26A8Q96RN1 970 aa12.94□□□□□ -0.34
MDC1-204ENST00000422266 TBX22Q9Y458 520 aa12.94□□□□□ -0.34
MDC1-204ENST00000422266 PIP4K2BP78356 416 aa12.93□□□□□ -0.34
MDC1-204ENST00000422266 NKTRP30414 1462 aaKnown RBP12.92□□□□□ -0.34
MDC1-204ENST00000422266 SLC4A1APQ9BWU0 796 aaKnown RBP12.92□□□□□ -0.34
MDC1-204ENST00000422266 PIK3R4Q99570 1358 aa12.92□□□□□ -0.34
MDC1-204ENST00000422266 ZNF326Q5BKZ1 582 aaKnown RBP12.91□□□□□ -0.34
MDC1-204ENST00000422266 PROSER2Q86WR7 435 aaPredicted RBP12.91□□□□□ -0.34
MDC1-204ENST00000422266 SPHKAPQ2M3C7 1700 aa12.91□□□□□ -0.34
MDC1-204ENST00000422266 DIP2AQ14689 1571 aa12.9□□□□□ -0.34
MDC1-204ENST00000422266 NCOA3Q9Y6Q9 1424 aa12.89□□□□□ -0.35
MDC1-204ENST00000422266 STRCP1A6NGW2 1772 aa12.89□□□□□ -0.35
MDC1-204ENST00000422266 TRPM2O94759 1503 aa12.88□□□□□ -0.35
MDC1-204ENST00000422266 TMEM94Q12767 1356 aa12.88□□□□□ -0.35
MDC1-204ENST00000422266 NWD1Q149M9 1564 aa12.87□□□□□ -0.35
MDC1-204ENST00000422266 MSH6P52701 1360 aa12.87□□□□□ -0.35
MDC1-204ENST00000422266 DISP3Q9P2K9 1392 aa12.87□□□□□ -0.35
MDC1-204ENST00000422266 VGFO15240 615 aaPredicted RBP12.87□□□□□ -0.35
MDC1-204ENST00000422266 MYO5BQ9ULV0 1848 aa12.87□□□□□ -0.35
MDC1-204ENST00000422266 RPGRIP1LQ68CZ1 1315 aa12.87□□□□□ -0.35
MDC1-204ENST00000422266 HSPA1LP34931 641 aa12.86□□□□□ -0.35
MDC1-204ENST00000422266 NUTM2DQ5VT03 806 aaPredicted RBP12.84□□□□□ -0.35
MDC1-204ENST00000422266 FAM135BQ49AJ0 1406 aa12.84□□□□□ -0.35
MDC1-204ENST00000422266 ADAMTS13Q76LX8 1427 aa12.84□□□□□ -0.35
MDC1-204ENST00000422266 KIF1BO60333 1816 aa12.83□□□□□ -0.35
MDC1-204ENST00000422266 C14orf37Q86TY3 774 aa12.83□□□□□ -0.36
MDC1-204ENST00000422266 CHD2O14647 1828 aaKnown RBP12.83□□□□□ -0.36
MDC1-204ENST00000422266 SETBP1Q9Y6X0 1596 aa12.82□□□□□ -0.36
MDC1-204ENST00000422266 CCDC144AA2RUR9 1427 aa12.82□□□□□ -0.36
MDC1-204ENST00000422266 SETD5Q9C0A6 1442 aa12.82□□□□□ -0.36
MDC1-204ENST00000422266 CADPS2Q86UW7 1296 aa12.82□□□□□ -0.36
MDC1-204ENST00000422266 MPHOSPH9Q99550 1183 aa12.82□□□□□ -0.36
MDC1-204ENST00000422266 C19orf44Q9H6X5 657 aa12.82□□□□□ -0.36
MDC1-204ENST00000422266 AMOTL2Q9Y2J4 779 aa12.82□□□□□ -0.36
MDC1-204ENST00000422266 CLTCL1P53675 1640 aa12.81□□□□□ -0.36
MDC1-204ENST00000422266 ATF3P18847 181 aa12.8□□□□□ -0.36
MDC1-204ENST00000422266 SLAIN2Q9P270 581 aa12.8□□□□□ -0.36
MDC1-204ENST00000422266 ALKQ9UM73 1620 aa12.8□□□□□ -0.36
MDC1-204ENST00000422266 XIRP1Q702N8 1843 aaKnown RBP12.79□□□□□ -0.36
MDC1-204ENST00000422266 HRCP23327 699 aa12.79□□□□□ -0.36
MDC1-204ENST00000422266 SENP3Q9H4L4 574 aaPredicted RBP12.79□□□□□ -0.36
MDC1-204ENST00000422266 NEXMIFQ5QGS0 1516 aa12.78□□□□□ -0.36
MDC1-204ENST00000422266 DCCP43146 1447 aa12.78□□□□□ -0.36
MDC1-204ENST00000422266 ANKRD30BQ9BXX2 1392 aa12.77□□□□□ -0.37
MDC1-204ENST00000422266 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
MDC1-204ENST00000422266 PHF23Q9BUL5 403 aaPredicted RBP12.75□□□□□ -0.37
MDC1-204ENST00000422266 METP08581 1390 aa12.74□□□□□ -0.37
MDC1-204ENST00000422266 RAB3GAP2Q9H2M9 1393 aa12.74□□□□□ -0.37
MDC1-204ENST00000422266 FOXD1Q16676 465 aa12.74□□□□□ -0.37
MDC1-204ENST00000422266 NRXN3Q9Y4C0 1643 aa12.73□□□□□ -0.37
MDC1-204ENST00000422266 PTPRUQ92729 1446 aa12.73□□□□□ -0.37
MDC1-204ENST00000422266 XRN1Q8IZH2 1706 aaKnown RBP12.72□□□□□ -0.37
MDC1-204ENST00000422266 RGL3Q3MIN7 710 aa12.72□□□□□ -0.37
MDC1-204ENST00000422266 ROBO1Q9Y6N7 1651 aa12.72□□□□□ -0.37
MDC1-204ENST00000422266 MED1Q15648 1581 aaPredicted RBP12.72□□□□□ -0.37
MDC1-204ENST00000422266 PTCH1Q13635 1447 aa12.71□□□□□ -0.37
MDC1-204ENST00000422266 STAC3Q96MF2 364 aa12.71□□□□□ -0.37
MDC1-204ENST00000422266 SPATA31E1Q6ZUB1 1445 aa12.71□□□□□ -0.38
MDC1-204ENST00000422266 PRAG1Q86YV5 1406 aa12.71□□□□□ -0.38
MDC1-204ENST00000422266 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.7□□□□□ -0.38
MDC1-204ENST00000422266 ADGRL3Q9HAR2 1447 aa12.7□□□□□ -0.38
MDC1-204ENST00000422266 JCADQ9P266 1359 aa12.69□□□□□ -0.38
MDC1-204ENST00000422266 PPLO60437 1756 aa12.69□□□□□ -0.38
MDC1-204ENST00000422266 SOCS7O14512 581 aa12.68□□□□□ -0.38
MDC1-204ENST00000422266 SPATA31A6Q5VVP1 1343 aa12.66□□□□□ -0.38
MDC1-204ENST00000422266 ADGRF5Q8IZF2 1346 aa12.66□□□□□ -0.38
MDC1-204ENST00000422266 ILDR2Q71H61 639 aa12.66□□□□□ -0.38
MDC1-204ENST00000422266 BRINP3Q76B58 766 aa12.66□□□□□ -0.38
MDC1-204ENST00000422266 PHLPP1O60346 1717 aa12.65□□□□□ -0.38
MDC1-204ENST00000422266 PIK3C2GO75747 1445 aa12.65□□□□□ -0.38
MDC1-204ENST00000422266 AHDC1Q5TGY3 1603 aaPredicted RBP12.65□□□□□ -0.38
MDC1-204ENST00000422266 ABCC11Q96J66 1382 aa12.65□□□□□ -0.38
MDC1-204ENST00000422266 MST1RQ04912 1400 aa12.64□□□□□ -0.39
MDC1-204ENST00000422266 LRRC59Q96AG4 307 aaKnown RBP12.64□□□□□ -0.39
MDC1-204ENST00000422266 SIRT1Q96EB6 747 aa12.64□□□□□ -0.39
MDC1-204ENST00000422266 LRPPRCP42704 1394 aaKnown RBP12.64□□□□□ -0.39
MDC1-204ENST00000422266 ROBO2Q9HCK4 1378 aa12.64□□□□□ -0.39
MDC1-204ENST00000422266 MYOM2P54296 1465 aa12.64□□□□□ -0.39
MDC1-204ENST00000422266 TECPR2O15040 1411 aa12.63□□□□□ -0.39
MDC1-204ENST00000422266 SETD1AO15047 1707 aaKnown RBP12.63□□□□□ -0.39
MDC1-204ENST00000422266 C14orf93Q9H972 538 aaKnown RBP12.63□□□□□ -0.39
MDC1-204ENST00000422266 DHX57Q6P158 1386 aaKnown RBP12.63□□□□□ -0.39
MDC1-204ENST00000422266 IFT172Q9UG01 1749 aa12.62□□□□□ -0.39
MDC1-204ENST00000422266 LAMC1P11047 1609 aa12.61□□□□□ -0.39
MDC1-204ENST00000422266 ASXL1Q8IXJ9 1541 aa12.61□□□□□ -0.39
MDC1-204ENST00000422266 C1orf167Q5SNV9 1468 aa12.6□□□□□ -0.39
MDC1-204ENST00000422266 NRXN1Q9ULB1 1477 aa12.6□□□□□ -0.39
MDC1-204ENST00000422266 COL16A1Q07092 1604 aaPredicted RBP12.6□□□□□ -0.39
MDC1-204ENST00000422266 STK26Q9P289 416 aa12.6□□□□□ -0.39
MDC1-204ENST00000422266 YTHDC2Q9H6S0 1430 aaKnown RBP12.6□□□□□ -0.39
MDC1-204ENST00000422266 MEX3CQ5U5Q3 659 aaKnown RBP12.59□□□□□ -0.39
MDC1-204ENST00000422266 NALCNQ8IZF0 1738 aa12.59□□□□□ -0.39
MDC1-204ENST00000422266 TMEM132EQ6IEE7 984 aa12.58□□□□□ -0.4
MDC1-204ENST00000422266 NPHP3Q7Z494 1330 aa12.58□□□□□ -0.4
MDC1-204ENST00000422266 CDC42BPGQ6DT37 1551 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms