RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 MNS1Q8NEH6 495 aa15.06■□□□□ 0
CLCN4-203ENST00000421085 FBXW7Q969H0 707 aa15.05■□□□□ 0
CLCN4-203ENST00000421085 RNF214Q8ND24 703 aa15.05■□□□□ 0
CLCN4-203ENST00000421085 VPS37CA5D8V6 355 aaPredicted RBP15.05■□□□□ -0
CLCN4-203ENST00000421085 ZKSCAN1P17029 563 aaPredicted RBP15.05■□□□□ -0
CLCN4-203ENST00000421085 MARCH6O60337 910 aa15.04■□□□□ -0
CLCN4-203ENST00000421085 NUTM2DQ5VT03 806 aaPredicted RBP15.04■□□□□ -0
CLCN4-203ENST00000421085 RUFY2Q8WXA3 655 aa15.04■□□□□ -0
CLCN4-203ENST00000421085 TRAK1Q9UPV9 953 aa15.04■□□□□ -0
CLCN4-203ENST00000421085 INTS3Q68E01 1043 aaKnown RBP15.04■□□□□ -0
CLCN4-203ENST00000421085 IPO7O95373 1038 aaKnown RBP15.03■□□□□ -0
CLCN4-203ENST00000421085 SMC3Q9UQE7 1217 aa15.03■□□□□ -0
CLCN4-203ENST00000421085 LNPKQ9C0E8 428 aa15.03■□□□□ -0
CLCN4-203ENST00000421085 HNRNPMP52272 730 aaKnown RBP eCLIP15.03■□□□□ -0
CLCN4-203ENST00000421085 PCMTD1Q96MG8 357 aaPredicted RBP15.03■□□□□ -0
CLCN4-203ENST00000421085 AMPHP49418 695 aa15.02□□□□□ -0.01
CLCN4-203ENST00000421085 AKAP17AQ02040 695 aaKnown RBP15.02□□□□□ -0.01
CLCN4-203ENST00000421085 CALRP27797 417 aaKnown RBP15.01□□□□□ -0.01
CLCN4-203ENST00000421085 CAVIN1Q6NZI2 390 aaKnown RBP15.01□□□□□ -0.01
CLCN4-203ENST00000421085 PRM3Q9NNZ6 103 aa15.01□□□□□ -0.01
CLCN4-203ENST00000421085 LTV1Q96GA3 475 aaPredicted RBP15.01□□□□□ -0.01
CLCN4-203ENST00000421085 CCDC66A2RUB6 948 aa15□□□□□ -0.01
CLCN4-203ENST00000421085 HSP90B2PQ58FF3 399 aa15□□□□□ -0.01
CLCN4-203ENST00000421085 PANK1Q8TE04 598 aa15□□□□□ -0.01
CLCN4-203ENST00000421085 ACBD3Q9H3P7 528 aa15□□□□□ -0.01
CLCN4-203ENST00000421085 CCDC173Q0VFZ6 552 aa15□□□□□ -0.01
CLCN4-203ENST00000421085 AK7Q96M32 723 aa15□□□□□ -0.01
CLCN4-203ENST00000421085 RUFY1Q96T51 708 aa15□□□□□ -0.01
CLCN4-203ENST00000421085 TRIM29Q14134 588 aa14.99□□□□□ -0.01
CLCN4-203ENST00000421085 VPS53Q5VIR6 699 aa14.99□□□□□ -0.01
CLCN4-203ENST00000421085 ANKRD20A12PQ8NF67 263 aa14.99□□□□□ -0.01
CLCN4-203ENST00000421085 KIF3BO15066 747 aa14.99□□□□□ -0.01
CLCN4-203ENST00000421085 SYNE3Q6ZMZ3 975 aa14.99□□□□□ -0.01
CLCN4-203ENST00000421085 FHOD3Q2V2M9 1422 aa14.98□□□□□ -0.01
CLCN4-203ENST00000421085 CPLX2Q6PUV4 134 aaKnown RBP14.98□□□□□ -0.01
CLCN4-203ENST00000421085 CWC15Q9P013 229 aaKnown RBP14.98□□□□□ -0.01
CLCN4-203ENST00000421085 NACADO15069 1562 aa14.98□□□□□ -0.01
CLCN4-203ENST00000421085 HOOK1Q9UJC3 728 aaKnown RBP14.98□□□□□ -0.01
CLCN4-203ENST00000421085 CCDC144AA2RUR9 1427 aa14.97□□□□□ -0.01
CLCN4-203ENST00000421085 PRKCSHP14314 528 aaPredicted RBP14.97□□□□□ -0.01
CLCN4-203ENST00000421085 CPLX1O14810 134 aa14.97□□□□□ -0.01
CLCN4-203ENST00000421085 CCDC73Q6ZRK6 1079 aa14.97□□□□□ -0.01
CLCN4-203ENST00000421085 API5Q9BZZ5 524 aaKnown RBP14.97□□□□□ -0.01
CLCN4-203ENST00000421085 FOSBP53539 338 aa14.97□□□□□ -0.01
CLCN4-203ENST00000421085 RNF20Q5VTR2 975 aa14.96□□□□□ -0.01
CLCN4-203ENST00000421085 EFCAB2Q5VUJ9 269 aa14.96□□□□□ -0.01
CLCN4-203ENST00000421085 CCDC7Q96M83 1385 aa14.96□□□□□ -0.01
CLCN4-203ENST00000421085 CCDC18Q5T9S5 1454 aa14.96□□□□□ -0.01
CLCN4-203ENST00000421085 IFIT2P09913 472 aaKnown RBP14.96□□□□□ -0.01
CLCN4-203ENST00000421085 RIPK4P57078 832 aa14.96□□□□□ -0.02
CLCN4-203ENST00000421085 NGEFQ8N5V2 710 aa14.96□□□□□ -0.02
CLCN4-203ENST00000421085 CDC45O75419 566 aa14.95□□□□□ -0.02
CLCN4-203ENST00000421085 NGDNQ8NEJ9 315 aaKnown RBP14.95□□□□□ -0.02
CLCN4-203ENST00000421085 TSPY26PQ9H489 355 aa14.95□□□□□ -0.02
CLCN4-203ENST00000421085 PRPF40AO75400 957 aaKnown RBP14.95□□□□□ -0.02
CLCN4-203ENST00000421085 KIF7Q2M1P5 1343 aa14.95□□□□□ -0.02
CLCN4-203ENST00000421085 CNTLNQ9NXG0 1405 aa14.95□□□□□ -0.02
CLCN4-203ENST00000421085 HMGN5P82970 282 aaKnown RBP14.94□□□□□ -0.02
CLCN4-203ENST00000421085 RAPGEF2Q9Y4G8 1499 aa14.94□□□□□ -0.02
CLCN4-203ENST00000421085 TRIM5Q9C035 493 aa14.94□□□□□ -0.02
CLCN4-203ENST00000421085 CARMIL2Q6F5E8 1435 aa14.94□□□□□ -0.02
CLCN4-203ENST00000421085 RUNDC1Q96C34 613 aa14.93□□□□□ -0.02
CLCN4-203ENST00000421085 ROCK1Q13464 1354 aa14.93□□□□□ -0.02
CLCN4-203ENST00000421085 AAMPQ13685 434 aa14.93□□□□□ -0.02
CLCN4-203ENST00000421085 C9orf78Q9NZ63 289 aaPredicted RBP14.93□□□□□ -0.02
CLCN4-203ENST00000421085 LETM1O95202 739 aaPredicted RBP14.93□□□□□ -0.02
CLCN4-203ENST00000421085 NUTM2FA1L443 756 aa14.93□□□□□ -0.02
CLCN4-203ENST00000421085 H0YHG0 523 aa14.93□□□□□ -0.02
CLCN4-203ENST00000421085 PDILTQ8N807 584 aa14.92□□□□□ -0.02
CLCN4-203ENST00000421085 NAT10Q9H0A0 1025 aaKnown RBP14.92□□□□□ -0.02
CLCN4-203ENST00000421085 MBD3O95983 291 aa14.92□□□□□ -0.02
CLCN4-203ENST00000421085 RRP12Q5JTH9 1297 aaKnown RBP14.92□□□□□ -0.02
CLCN4-203ENST00000421085 NECTIN2Q92692 538 aa14.92□□□□□ -0.02
CLCN4-203ENST00000421085 APPP05067 770 aa14.92□□□□□ -0.02
CLCN4-203ENST00000421085 EIF2S2P20042 333 aaKnown RBP14.92□□□□□ -0.02
CLCN4-203ENST00000421085 CCDC47Q96A33 483 aaKnown RBP14.92□□□□□ -0.02
CLCN4-203ENST00000421085 GRPEL1Q9HAV7 217 aa14.92□□□□□ -0.02
CLCN4-203ENST00000421085 CDR1P51861 262 aa14.92□□□□□ -0.02
CLCN4-203ENST00000421085 CCDC27Q2M243 656 aa14.92□□□□□ -0.02
CLCN4-203ENST00000421085 MROH2BQ7Z745 1585 aa14.91□□□□□ -0.02
CLCN4-203ENST00000421085 LRRFIP1Q32MZ4 808 aaKnown RBP14.91□□□□□ -0.02
CLCN4-203ENST00000421085 NAP1L1P55209 391 aaKnown RBP14.91□□□□□ -0.02
CLCN4-203ENST00000421085 ERCC6Q03468 1493 aa14.91□□□□□ -0.02
CLCN4-203ENST00000421085 COG3Q96JB2 828 aa14.91□□□□□ -0.02
CLCN4-203ENST00000421085 BACH2Q9BYV9 841 aa14.91□□□□□ -0.02
CLCN4-203ENST00000421085 DIAPH1O60610 1272 aaKnown RBP14.91□□□□□ -0.02
CLCN4-203ENST00000421085 CDCA7LQ96GN5 454 aa14.91□□□□□ -0.02
CLCN4-203ENST00000421085 PODXL2Q9NZ53 605 aa14.91□□□□□ -0.02
CLCN4-203ENST00000421085 RRP9O43818 475 aaKnown RBP14.9□□□□□ -0.02
CLCN4-203ENST00000421085 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.9□□□□□ -0.02
CLCN4-203ENST00000421085 WWC1Q8IX03 1113 aa14.9□□□□□ -0.02
CLCN4-203ENST00000421085 UQCRHLA0A096LP55 91 aa14.9□□□□□ -0.02
CLCN4-203ENST00000421085 UQCRHP07919 91 aa14.9□□□□□ -0.02
CLCN4-203ENST00000421085 SPC24Q8NBT2 197 aa14.9□□□□□ -0.02
CLCN4-203ENST00000421085 EVC2Q86UK5 1308 aa14.89□□□□□ -0.03
CLCN4-203ENST00000421085 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.89□□□□□ -0.03
CLCN4-203ENST00000421085 SDF4Q9BRK5 362 aa14.89□□□□□ -0.03
CLCN4-203ENST00000421085 OLFM4Q6UX06 510 aa14.89□□□□□ -0.03
CLCN4-203ENST00000421085 TMX4Q9H1E5 349 aaPredicted RBP14.89□□□□□ -0.03
CLCN4-203ENST00000421085 PDZRN3Q9UPQ7 1066 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms