RNA–Protein interactions for RNA: ENST00000421058.1

PUDPP1-201, Transcript of pseudouridine 5'-phosphatase pseudogene 1, humanhuman

BASIC

Gene PUDPP1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPP1-201ENST00000421058 UBR1Q8IWV7 1749 aa12.02□□□□□ -0.49
PUDPP1-201ENST00000421058 RIMS2Q9UQ26 1411 aa12.02□□□□□ -0.49
PUDPP1-201ENST00000421058 CLTCL1P53675 1640 aa12□□□□□ -0.49
PUDPP1-201ENST00000421058 SCAF11Q99590 1463 aaKnown RBP12□□□□□ -0.49
PUDPP1-201ENST00000421058 SLIT1O75093 1534 aa12□□□□□ -0.49
PUDPP1-201ENST00000421058 TMEM131LA2VDJ0 1609 aa12□□□□□ -0.49
PUDPP1-201ENST00000421058 NUTM2DQ5VT03 806 aaPredicted RBP11.99□□□□□ -0.49
PUDPP1-201ENST00000421058 DCAF11Q8TEB1 546 aa11.99□□□□□ -0.49
PUDPP1-201ENST00000421058 TONSLQ96HA7 1378 aa11.98□□□□□ -0.49
PUDPP1-201ENST00000421058 LTKP29376 864 aa11.98□□□□□ -0.49
PUDPP1-201ENST00000421058 SIN3AQ96ST3 1273 aa11.98□□□□□ -0.49
PUDPP1-201ENST00000421058 TIMELESSQ9UNS1 1208 aa11.98□□□□□ -0.49
PUDPP1-201ENST00000421058 KDM2AQ9Y2K7 1162 aa11.98□□□□□ -0.49
PUDPP1-201ENST00000421058 NEURL4Q96JN8 1562 aa11.97□□□□□ -0.49
PUDPP1-201ENST00000421058 ARHGAP23Q9P227 1491 aa11.97□□□□□ -0.49
PUDPP1-201ENST00000421058 NPHP4O75161 1426 aaPredicted RBP11.97□□□□□ -0.49
PUDPP1-201ENST00000421058 PLEKHG1Q9ULL1 1385 aa11.96□□□□□ -0.49
PUDPP1-201ENST00000421058 TBX22Q9Y458 520 aa11.96□□□□□ -0.49
PUDPP1-201ENST00000421058 SPATA31E1Q6ZUB1 1445 aa11.95□□□□□ -0.5
PUDPP1-201ENST00000421058 MED14O60244 1454 aa11.95□□□□□ -0.5
PUDPP1-201ENST00000421058 ZFYVE9O95405 1425 aa11.94□□□□□ -0.5
PUDPP1-201ENST00000421058 SLC26A8Q96RN1 970 aa11.94□□□□□ -0.5
PUDPP1-201ENST00000421058 POLR1AO95602 1720 aaPredicted RBP11.94□□□□□ -0.5
PUDPP1-201ENST00000421058 MYO5BQ9ULV0 1848 aa11.93□□□□□ -0.5
PUDPP1-201ENST00000421058 SENP3Q9H4L4 574 aaPredicted RBP11.93□□□□□ -0.5
PUDPP1-201ENST00000421058 L3MBTL2Q969R5 705 aa11.92□□□□□ -0.5
PUDPP1-201ENST00000421058 IQGAP1P46940 1657 aa11.91□□□□□ -0.5
PUDPP1-201ENST00000421058 STRCQ7RTU9 1775 aa11.91□□□□□ -0.5
PUDPP1-201ENST00000421058 NEXMIFQ5QGS0 1516 aa11.91□□□□□ -0.5
PUDPP1-201ENST00000421058 KCNA6P17658 529 aa11.9□□□□□ -0.5
PUDPP1-201ENST00000421058 PIK3R4Q99570 1358 aa11.9□□□□□ -0.5
PUDPP1-201ENST00000421058 ADGRF5Q8IZF2 1346 aa11.89□□□□□ -0.51
PUDPP1-201ENST00000421058 C14orf93Q9H972 538 aaKnown RBP11.89□□□□□ -0.51
PUDPP1-201ENST00000421058 MYOM2P54296 1465 aa11.89□□□□□ -0.51
PUDPP1-201ENST00000421058 PPLO60437 1756 aa11.88□□□□□ -0.51
PUDPP1-201ENST00000421058 DIP2AQ14689 1571 aa11.88□□□□□ -0.51
PUDPP1-201ENST00000421058 C14orf37Q86TY3 774 aa11.87□□□□□ -0.51
PUDPP1-201ENST00000421058 PROSER2Q86WR7 435 aaPredicted RBP11.87□□□□□ -0.51
PUDPP1-201ENST00000421058 AMOTL2Q9Y2J4 779 aa11.87□□□□□ -0.51
PUDPP1-201ENST00000421058 CFAP70Q5T0N1 1121 aa11.86□□□□□ -0.51
PUDPP1-201ENST00000421058 SETBP1Q9Y6X0 1596 aa11.85□□□□□ -0.51
PUDPP1-201ENST00000421058 PIK3C2GO75747 1445 aa11.85□□□□□ -0.51
PUDPP1-201ENST00000421058 ZNF335Q9H4Z2 1342 aaPredicted RBP11.85□□□□□ -0.51
PUDPP1-201ENST00000421058 STK26Q9P289 416 aa11.84□□□□□ -0.51
PUDPP1-201ENST00000421058 ALKQ9UM73 1620 aa11.83□□□□□ -0.52
PUDPP1-201ENST00000421058 ZEB1P37275 1124 aaPredicted RBP11.83□□□□□ -0.52
PUDPP1-201ENST00000421058 TMEM132EQ6IEE7 984 aa11.83□□□□□ -0.52
PUDPP1-201ENST00000421058 POGKQ9P215 609 aa11.83□□□□□ -0.52
PUDPP1-201ENST00000421058 ADAMTS13Q76LX8 1427 aa11.83□□□□□ -0.52
PUDPP1-201ENST00000421058 IFT172Q9UG01 1749 aa11.83□□□□□ -0.52
PUDPP1-201ENST00000421058 CPS1P31327 1500 aa11.82□□□□□ -0.52
PUDPP1-201ENST00000421058 LAMC1P11047 1609 aa11.82□□□□□ -0.52
PUDPP1-201ENST00000421058 ROCK2O75116 1388 aaKnown RBP11.81□□□□□ -0.52
PUDPP1-201ENST00000421058 PRAG1Q86YV5 1406 aa11.81□□□□□ -0.52
PUDPP1-201ENST00000421058 SLC24A1O60721 1099 aa11.81□□□□□ -0.52
PUDPP1-201ENST00000421058 SIRT1Q96EB6 747 aa11.81□□□□□ -0.52
PUDPP1-201ENST00000421058 NRXN1Q9ULB1 1477 aa11.81□□□□□ -0.52
PUDPP1-201ENST00000421058 METP08581 1390 aa11.8□□□□□ -0.52
PUDPP1-201ENST00000421058 CERKQ8TCT0 537 aa11.8□□□□□ -0.52
PUDPP1-201ENST00000421058 CARD11Q9BXL7 1154 aa11.8□□□□□ -0.52
PUDPP1-201ENST00000421058 TRAK1Q9UPV9 953 aa11.8□□□□□ -0.52
PUDPP1-201ENST00000421058 LRPPRCP42704 1394 aaKnown RBP11.79□□□□□ -0.52
PUDPP1-201ENST00000421058 ABCC11Q96J66 1382 aa11.79□□□□□ -0.52
PUDPP1-201ENST00000421058 TOM1O60784 492 aa11.79□□□□□ -0.52
PUDPP1-201ENST00000421058 ATF3P18847 181 aa11.79□□□□□ -0.52
PUDPP1-201ENST00000421058 EIF3AQ14152 1382 aaKnown RBP11.79□□□□□ -0.52
PUDPP1-201ENST00000421058 YTHDC2Q9H6S0 1430 aaKnown RBP11.78□□□□□ -0.52
PUDPP1-201ENST00000421058 NCOA3Q9Y6Q9 1424 aa11.78□□□□□ -0.52
PUDPP1-201ENST00000421058 NKTRP30414 1462 aaKnown RBP11.78□□□□□ -0.52
PUDPP1-201ENST00000421058 C19orf44Q9H6X5 657 aa11.78□□□□□ -0.52
PUDPP1-201ENST00000421058 MSH6P52701 1360 aa11.78□□□□□ -0.52
PUDPP1-201ENST00000421058 CHD2O14647 1828 aaKnown RBP11.77□□□□□ -0.52
PUDPP1-201ENST00000421058 CADPS2Q86UW7 1296 aa11.77□□□□□ -0.53
PUDPP1-201ENST00000421058 KIAA1210Q9ULL0 1709 aa11.77□□□□□ -0.53
PUDPP1-201ENST00000421058 NRXN3Q9Y4C0 1643 aa11.76□□□□□ -0.53
PUDPP1-201ENST00000421058 NBPF1Q3BBV0 1214 aa11.76□□□□□ -0.53
PUDPP1-201ENST00000421058 NBPF8Q3BBV2 869 aa11.76□□□□□ -0.53
PUDPP1-201ENST00000421058 TMEM94Q12767 1356 aa11.76□□□□□ -0.53
PUDPP1-201ENST00000421058 PRAM1Q96QH2 718 aa11.75□□□□□ -0.53
PUDPP1-201ENST00000421058 IQSEC2Q5JU85 1478 aa11.75□□□□□ -0.53
PUDPP1-201ENST00000421058 UBAP1LF5GYI3 381 aa11.74□□□□□ -0.53
PUDPP1-201ENST00000421058 PTCH1Q13635 1447 aa11.74□□□□□ -0.53
PUDPP1-201ENST00000421058 FAM135BQ49AJ0 1406 aa11.74□□□□□ -0.53
PUDPP1-201ENST00000421058 NWD1Q149M9 1564 aa11.74□□□□□ -0.53
PUDPP1-201ENST00000421058 SAFB2Q14151 953 aaKnown RBP eCLIP11.73□□□□□ -0.53
PUDPP1-201ENST00000421058 WAPLQ7Z5K2 1190 aa11.73□□□□□ -0.53
PUDPP1-201ENST00000421058 PTPRUQ92729 1446 aa11.73□□□□□ -0.53
PUDPP1-201ENST00000421058 LRRC7Q96NW7 1537 aa11.73□□□□□ -0.53
PUDPP1-201ENST00000421058 CENPJQ9HC77 1338 aaPredicted RBP11.73□□□□□ -0.53
PUDPP1-201ENST00000421058 LTBP4Q8N2S1 1624 aa11.72□□□□□ -0.53
PUDPP1-201ENST00000421058 TECPR2O15040 1411 aa11.72□□□□□ -0.53
PUDPP1-201ENST00000421058 SCAF1Q9H7N4 1312 aaKnown RBP11.72□□□□□ -0.53
PUDPP1-201ENST00000421058 RBM33Q96EV2 1170 aaKnown RBP11.72□□□□□ -0.53
PUDPP1-201ENST00000421058 RALGAPBQ86X10 1494 aa11.71□□□□□ -0.53
PUDPP1-201ENST00000421058 ROBO2Q9HCK4 1378 aa11.71□□□□□ -0.53
PUDPP1-201ENST00000421058 TRPM1Q7Z4N2 1603 aa11.71□□□□□ -0.54
PUDPP1-201ENST00000421058 DLC1Q96QB1 1528 aa11.7□□□□□ -0.54
PUDPP1-201ENST00000421058 SETD1AO15047 1707 aaKnown RBP11.7□□□□□ -0.54
PUDPP1-201ENST00000421058 EIF4G2P78344 907 aaKnown RBP eCLIP11.7□□□□□ -0.54
PUDPP1-201ENST00000421058 XRN1Q8IZH2 1706 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms