RNA–Protein interactions for RNA: ENST00000420964.1

FAAP20-208, Transcript of FA core complex associated protein 20, humanhuman

TSL 3

Gene FAAP20, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-208ENST00000420964 PRAG1Q86YV5 1406 aa17.64■□□□□ 0.41
FAAP20-208ENST00000420964 NEXMIFQ5QGS0 1516 aa17.63■□□□□ 0.41
FAAP20-208ENST00000420964 UBR1Q8IWV7 1749 aa17.63■□□□□ 0.41
FAAP20-208ENST00000420964 ZNF326Q5BKZ1 582 aaKnown RBP17.62■□□□□ 0.41
FAAP20-208ENST00000420964 KDM2AQ9Y2K7 1162 aa17.62■□□□□ 0.41
FAAP20-208ENST00000420964 A2ML1A8K2U0 1454 aa17.62■□□□□ 0.41
FAAP20-208ENST00000420964 NBPF8Q3BBV2 869 aa17.61■□□□□ 0.41
FAAP20-208ENST00000420964 RALGAPBQ86X10 1494 aa17.61■□□□□ 0.41
FAAP20-208ENST00000420964 RPGRIP1LQ68CZ1 1315 aa17.6■□□□□ 0.41
FAAP20-208ENST00000420964 TRPM1Q7Z4N2 1603 aa17.6■□□□□ 0.41
FAAP20-208ENST00000420964 ZNF142P52746 1687 aaPredicted RBP17.59■□□□□ 0.41
FAAP20-208ENST00000420964 STAC3Q96MF2 364 aa17.59■□□□□ 0.41
FAAP20-208ENST00000420964 STAG3Q9UJ98 1225 aa17.59■□□□□ 0.41
FAAP20-208ENST00000420964 NRXN1Q9ULB1 1477 aa17.58■□□□□ 0.41
FAAP20-208ENST00000420964 CEP170BQ9Y4F5 1589 aaPredicted RBP17.57■□□□□ 0.4
FAAP20-208ENST00000420964 KIAA1210Q9ULL0 1709 aa17.56■□□□□ 0.4
FAAP20-208ENST00000420964 PIK3C2GO75747 1445 aa17.54■□□□□ 0.4
FAAP20-208ENST00000420964 ZFYVE9O95405 1425 aa17.54■□□□□ 0.4
FAAP20-208ENST00000420964 RIMS2Q9UQ26 1411 aa17.54■□□□□ 0.4
FAAP20-208ENST00000420964 ADGRF5Q8IZF2 1346 aa17.53■□□□□ 0.4
FAAP20-208ENST00000420964 LAMC1P11047 1609 aa17.53■□□□□ 0.4
FAAP20-208ENST00000420964 ROCK2O75116 1388 aaKnown RBP17.51■□□□□ 0.39
FAAP20-208ENST00000420964 TMEM2Q9UHN6 1383 aa17.51■□□□□ 0.39
FAAP20-208ENST00000420964 VGFO15240 615 aaPredicted RBP17.5■□□□□ 0.39
FAAP20-208ENST00000420964 NUTM2DQ5VT03 806 aaPredicted RBP17.5■□□□□ 0.39
FAAP20-208ENST00000420964 DMRT2Q9Y5R5 561 aa17.5■□□□□ 0.39
FAAP20-208ENST00000420964 SLIT1O75093 1534 aa17.5■□□□□ 0.39
FAAP20-208ENST00000420964 GPRASP1Q5JY77 1395 aa17.49■□□□□ 0.39
FAAP20-208ENST00000420964 ARHGAP23Q9P227 1491 aa17.49■□□□□ 0.39
FAAP20-208ENST00000420964 NCKAP5LQ9HCH0 1330 aa17.48■□□□□ 0.39
FAAP20-208ENST00000420964 LTBP4Q8N2S1 1624 aa17.48■□□□□ 0.39
FAAP20-208ENST00000420964 SETBP1Q9Y6X0 1596 aa17.47■□□□□ 0.39
FAAP20-208ENST00000420964 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.46■□□□□ 0.39
FAAP20-208ENST00000420964 IQGAP1P46940 1657 aa17.45■□□□□ 0.38
FAAP20-208ENST00000420964 NBPF1Q3BBV0 1214 aa17.45■□□□□ 0.38
FAAP20-208ENST00000420964 CARD11Q9BXL7 1154 aa17.45■□□□□ 0.38
FAAP20-208ENST00000420964 NRXN3Q9Y4C0 1643 aa17.45■□□□□ 0.38
FAAP20-208ENST00000420964 USP47Q96K76 1375 aa17.44■□□□□ 0.38
FAAP20-208ENST00000420964 THEMISQ8N1K5 641 aaPredicted RBP17.44■□□□□ 0.38
FAAP20-208ENST00000420964 HDGFP51858 240 aaKnown RBP17.43■□□□□ 0.38
FAAP20-208ENST00000420964 CFAP70Q5T0N1 1121 aa17.43■□□□□ 0.38
FAAP20-208ENST00000420964 ADGRB1O14514 1584 aa17.43■□□□□ 0.38
FAAP20-208ENST00000420964 SETD1AO15047 1707 aaKnown RBP17.43■□□□□ 0.38
FAAP20-208ENST00000420964 ALKQ9UM73 1620 aa17.43■□□□□ 0.38
FAAP20-208ENST00000420964 ZNF316A6NFI3 1004 aaPredicted RBP17.42■□□□□ 0.38
FAAP20-208ENST00000420964 EIF4G2P78344 907 aaKnown RBP eCLIP17.42■□□□□ 0.38
FAAP20-208ENST00000420964 C14orf93Q9H972 538 aaKnown RBP17.42■□□□□ 0.38
FAAP20-208ENST00000420964 SCAF11Q99590 1463 aaKnown RBP17.42■□□□□ 0.38
FAAP20-208ENST00000420964 ASXL1Q8IXJ9 1541 aa17.42■□□□□ 0.38
FAAP20-208ENST00000420964 PLEKHG1Q9ULL1 1385 aa17.4■□□□□ 0.38
FAAP20-208ENST00000420964 HSPA5P11021 654 aaKnown RBP17.4■□□□□ 0.38
FAAP20-208ENST00000420964 EID1Q9Y6B2 187 aa17.4■□□□□ 0.38
FAAP20-208ENST00000420964 POLR1AO95602 1720 aaPredicted RBP17.39■□□□□ 0.37
FAAP20-208ENST00000420964 TXNDC2Q86VQ3 553 aa17.39■□□□□ 0.37
FAAP20-208ENST00000420964 ZNF335Q9H4Z2 1342 aaPredicted RBP17.39■□□□□ 0.37
FAAP20-208ENST00000420964 LTKP29376 864 aa17.38■□□□□ 0.37
FAAP20-208ENST00000420964 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
FAAP20-208ENST00000420964 DIP2AQ14689 1571 aa17.36■□□□□ 0.37
FAAP20-208ENST00000420964 HIRIP3Q9BW71 556 aaPredicted RBP17.36■□□□□ 0.37
FAAP20-208ENST00000420964 EIF3AQ14152 1382 aaKnown RBP17.36■□□□□ 0.37
FAAP20-208ENST00000420964 ADAMTS13Q76LX8 1427 aa17.35■□□□□ 0.37
FAAP20-208ENST00000420964 ARHGEF28Q8N1W1 1705 aaKnown RBP17.35■□□□□ 0.37
FAAP20-208ENST00000420964 TMEM132EQ6IEE7 984 aa17.33■□□□□ 0.36
FAAP20-208ENST00000420964 ILDR2Q71H61 639 aa17.33■□□□□ 0.36
FAAP20-208ENST00000420964 BCANQ96GW7 911 aa17.33■□□□□ 0.36
FAAP20-208ENST00000420964 MED14O60244 1454 aa17.32■□□□□ 0.36
FAAP20-208ENST00000420964 YTHDC2Q9H6S0 1430 aaKnown RBP17.32■□□□□ 0.36
FAAP20-208ENST00000420964 ANKLE2Q86XL3 938 aa17.32■□□□□ 0.36
FAAP20-208ENST00000420964 KNDC1Q76NI1 1749 aa17.31■□□□□ 0.36
FAAP20-208ENST00000420964 ST20-MTHFSA0A0A6YYL1 179 aa17.31■□□□□ 0.36
FAAP20-208ENST00000420964 QRICH2Q9H0J4 1663 aa17.29■□□□□ 0.36
FAAP20-208ENST00000420964 METP08581 1390 aa17.29■□□□□ 0.36
FAAP20-208ENST00000420964 NPHP4O75161 1426 aaPredicted RBP17.29■□□□□ 0.36
FAAP20-208ENST00000420964 LRPPRCP42704 1394 aaKnown RBP17.28■□□□□ 0.36
FAAP20-208ENST00000420964 DLC1Q96QB1 1528 aa17.28■□□□□ 0.36
FAAP20-208ENST00000420964 TRAK1Q9UPV9 953 aa17.27■□□□□ 0.36
FAAP20-208ENST00000420964 CPS1P31327 1500 aa17.26■□□□□ 0.35
FAAP20-208ENST00000420964 IQSEC2Q5JU85 1478 aa17.26■□□□□ 0.35
FAAP20-208ENST00000420964 TECPR2O15040 1411 aa17.25■□□□□ 0.35
FAAP20-208ENST00000420964 SLC26A8Q96RN1 970 aa17.25■□□□□ 0.35
FAAP20-208ENST00000420964 TESK2Q96S53 571 aa17.25■□□□□ 0.35
FAAP20-208ENST00000420964 STK26Q9P289 416 aa17.25■□□□□ 0.35
FAAP20-208ENST00000420964 DISP3Q9P2K9 1392 aa17.25■□□□□ 0.35
FAAP20-208ENST00000420964 XRN1Q8IZH2 1706 aaKnown RBP17.24■□□□□ 0.35
FAAP20-208ENST00000420964 CENPJQ9HC77 1338 aaPredicted RBP17.24■□□□□ 0.35
FAAP20-208ENST00000420964 TBX22Q9Y458 520 aa17.24■□□□□ 0.35
FAAP20-208ENST00000420964 ABCC11Q96J66 1382 aa17.24■□□□□ 0.35
FAAP20-208ENST00000420964 CCDC7Q96M83 1385 aa17.23■□□□□ 0.35
FAAP20-208ENST00000420964 SBNO2Q9Y2G9 1366 aa17.23■□□□□ 0.35
FAAP20-208ENST00000420964 WASHC2AQ641Q2 1341 aa17.22■□□□□ 0.35
FAAP20-208ENST00000420964 PTPRUQ92729 1446 aa17.22■□□□□ 0.35
FAAP20-208ENST00000420964 UBAP1LF5GYI3 381 aa17.22■□□□□ 0.35
FAAP20-208ENST00000420964 PIK3R4Q99570 1358 aa17.22■□□□□ 0.35
FAAP20-208ENST00000420964 KIF7Q2M1P5 1343 aa17.21■□□□□ 0.35
FAAP20-208ENST00000420964 C11orf95C9JLR9 678 aaPredicted RBP17.21■□□□□ 0.35
FAAP20-208ENST00000420964 CHD2O14647 1828 aaKnown RBP17.2■□□□□ 0.34
FAAP20-208ENST00000420964 FAM135BQ49AJ0 1406 aa17.2■□□□□ 0.34
FAAP20-208ENST00000420964 TMF1P82094 1093 aa17.19■□□□□ 0.34
FAAP20-208ENST00000420964 PRAM1Q96QH2 718 aa17.19■□□□□ 0.34
FAAP20-208ENST00000420964 PTCH1Q13635 1447 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms