RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 PLEKHG1Q9ULL1 1385 aa31.16■■■□□ 2.58
MCF2L-212ENST00000420013 SPHKAPQ2M3C7 1700 aa31.15■■■□□ 2.58
MCF2L-212ENST00000420013 RIMS2Q9UQ26 1411 aa31.15■■■□□ 2.58
MCF2L-212ENST00000420013 NUP155O75694 1391 aa31.13■■■□□ 2.57
MCF2L-212ENST00000420013 DIP2AQ14689 1571 aa31.13■■■□□ 2.57
MCF2L-212ENST00000420013 CHD2O14647 1828 aaKnown RBP31.12■■■□□ 2.57
MCF2L-212ENST00000420013 KCNA6P17658 529 aa31.11■■■□□ 2.57
MCF2L-212ENST00000420013 HDGFP51858 240 aaKnown RBP31.1■■■□□ 2.57
MCF2L-212ENST00000420013 ILDR2Q71H61 639 aa31.1■■■□□ 2.57
MCF2L-212ENST00000420013 ITGAEP38570 1179 aa31.08■■■□□ 2.57
MCF2L-212ENST00000420013 TMEM94Q12767 1356 aa31.07■■■□□ 2.56
MCF2L-212ENST00000420013 SLC26A8Q96RN1 970 aa31.07■■■□□ 2.56
MCF2L-212ENST00000420013 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.05■■■□□ 2.56
MCF2L-212ENST00000420013 PPP1R15AO75807 674 aaPredicted RBP31.04■■■□□ 2.56
MCF2L-212ENST00000420013 PPARGC1BQ86YN6 1023 aaKnown RBP31.04■■■□□ 2.56
MCF2L-212ENST00000420013 SOCS7O14512 581 aa31■■■□□ 2.55
MCF2L-212ENST00000420013 FAM135BQ49AJ0 1406 aa30.99■■■□□ 2.55
MCF2L-212ENST00000420013 BCANQ96GW7 911 aa30.99■■■□□ 2.55
MCF2L-212ENST00000420013 NAIPQ13075 1403 aa30.98■■■□□ 2.55
MCF2L-212ENST00000420013 ROBO1Q9Y6N7 1651 aa30.97■■■□□ 2.55
MCF2L-212ENST00000420013 PIK3R4Q99570 1358 aa30.97■■■□□ 2.55
MCF2L-212ENST00000420013 CHGAP10645 457 aaKnown RBP30.97■■■□□ 2.55
MCF2L-212ENST00000420013 TRPM2O94759 1503 aa30.97■■■□□ 2.55
MCF2L-212ENST00000420013 PROSER2Q86WR7 435 aaPredicted RBP30.96■■■□□ 2.55
MCF2L-212ENST00000420013 ADAMTS13Q76LX8 1427 aa30.96■■■□□ 2.55
MCF2L-212ENST00000420013 TBX22Q9Y458 520 aa30.95■■■□□ 2.55
MCF2L-212ENST00000420013 MSH6P52701 1360 aa30.94■■■□□ 2.54
MCF2L-212ENST00000420013 NCOA3Q9Y6Q9 1424 aa30.94■■■□□ 2.54
MCF2L-212ENST00000420013 SETBP1Q9Y6X0 1596 aa30.92■■■□□ 2.54
MCF2L-212ENST00000420013 HFM1A2PYH4 1435 aa30.92■■■□□ 2.54
MCF2L-212ENST00000420013 CLTCL1P53675 1640 aa30.92■■■□□ 2.54
MCF2L-212ENST00000420013 KIF1BO60333 1816 aa30.91■■■□□ 2.54
MCF2L-212ENST00000420013 NRXN3Q9Y4C0 1643 aa30.9■■■□□ 2.54
MCF2L-212ENST00000420013 XRN1Q8IZH2 1706 aaKnown RBP30.86■■■□□ 2.53
MCF2L-212ENST00000420013 NEXMIFQ5QGS0 1516 aa30.83■■■□□ 2.53
MCF2L-212ENST00000420013 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.81■■■□□ 2.52
MCF2L-212ENST00000420013 PHF23Q9BUL5 403 aaPredicted RBP30.8■■■□□ 2.52
MCF2L-212ENST00000420013 PHLPP1O60346 1717 aa30.8■■■□□ 2.52
MCF2L-212ENST00000420013 RBM33Q96EV2 1170 aaKnown RBP30.79■■■□□ 2.52
MCF2L-212ENST00000420013 SENP3Q9H4L4 574 aaPredicted RBP30.79■■■□□ 2.52
MCF2L-212ENST00000420013 NUTM2DQ5VT03 806 aaPredicted RBP30.78■■■□□ 2.52
MCF2L-212ENST00000420013 DCCP43146 1447 aa30.74■■■□□ 2.51
MCF2L-212ENST00000420013 PTPRUQ92729 1446 aa30.74■■■□□ 2.51
MCF2L-212ENST00000420013 ZNF326Q5BKZ1 582 aaKnown RBP30.73■■■□□ 2.51
MCF2L-212ENST00000420013 SLAIN2Q9P270 581 aa30.72■■■□□ 2.51
MCF2L-212ENST00000420013 COL16A1Q07092 1604 aaPredicted RBP30.71■■■□□ 2.51
MCF2L-212ENST00000420013 AHDC1Q5TGY3 1603 aaPredicted RBP30.7■■■□□ 2.51
MCF2L-212ENST00000420013 CADPS2Q86UW7 1296 aa30.69■■■□□ 2.5
MCF2L-212ENST00000420013 SETD1AO15047 1707 aaKnown RBP30.69■■■□□ 2.5
MCF2L-212ENST00000420013 C14orf37Q86TY3 774 aa30.68■■■□□ 2.5
MCF2L-212ENST00000420013 PPLO60437 1756 aa30.67■■■□□ 2.5
MCF2L-212ENST00000420013 C19orf44Q9H6X5 657 aa30.67■■■□□ 2.5
MCF2L-212ENST00000420013 AMOTL2Q9Y2J4 779 aa30.67■■■□□ 2.5
MCF2L-212ENST00000420013 TRIM52Q96A61 297 aa30.66■■■□□ 2.5
MCF2L-212ENST00000420013 SLC4A1APQ9BWU0 796 aaKnown RBP30.63■■■□□ 2.49
MCF2L-212ENST00000420013 JCADQ9P266 1359 aa30.63■■■□□ 2.49
MCF2L-212ENST00000420013 ATF3P18847 181 aa30.62■■■□□ 2.49
MCF2L-212ENST00000420013 METP08581 1390 aa30.62■■■□□ 2.49
MCF2L-212ENST00000420013 NALCNQ8IZF0 1738 aa30.61■■■□□ 2.49
MCF2L-212ENST00000420013 SHPRHQ149N8 1683 aa30.61■■■□□ 2.49
MCF2L-212ENST00000420013 PRAG1Q86YV5 1406 aa30.6■■■□□ 2.49
MCF2L-212ENST00000420013 ADGRL3Q9HAR2 1447 aa30.59■■■□□ 2.49
MCF2L-212ENST00000420013 PTCH1Q13635 1447 aa30.58■■■□□ 2.49
MCF2L-212ENST00000420013 RPGRIP1LQ68CZ1 1315 aa30.57■■■□□ 2.48
MCF2L-212ENST00000420013 NHSL1Q5SYE7 1610 aa30.56■■■□□ 2.48
MCF2L-212ENST00000420013 VGFO15240 615 aaPredicted RBP30.55■■■□□ 2.48
MCF2L-212ENST00000420013 ASXL1Q8IXJ9 1541 aa30.54■■■□□ 2.48
MCF2L-212ENST00000420013 IFT172Q9UG01 1749 aa30.54■■■□□ 2.48
MCF2L-212ENST00000420013 ACIN1Q9UKV3 1341 aaKnown RBP30.53■■■□□ 2.48
MCF2L-212ENST00000420013 MST1RQ04912 1400 aa30.53■■■□□ 2.48
MCF2L-212ENST00000420013 CCDC144AA2RUR9 1427 aa30.52■■■□□ 2.48
MCF2L-212ENST00000420013 RGS17Q9UGC6 210 aaPredicted RBP30.5■■■□□ 2.47
MCF2L-212ENST00000420013 SPATA31A6Q5VVP1 1343 aa30.48■■■□□ 2.47
MCF2L-212ENST00000420013 BRINP3Q76B58 766 aa30.47■■■□□ 2.47
MCF2L-212ENST00000420013 SPATA31E1Q6ZUB1 1445 aa30.44■■■□□ 2.46
MCF2L-212ENST00000420013 LRP6O75581 1613 aa30.43■■■□□ 2.46
MCF2L-212ENST00000420013 LAMC1P11047 1609 aa30.43■■■□□ 2.46
MCF2L-212ENST00000420013 SETD5Q9C0A6 1442 aa30.41■■■□□ 2.46
MCF2L-212ENST00000420013 KNDC1Q76NI1 1749 aa30.41■■■□□ 2.46
MCF2L-212ENST00000420013 ANKRD30BQ9BXX2 1392 aa30.4■■■□□ 2.46
MCF2L-212ENST00000420013 MPHOSPH9Q99550 1183 aa30.39■■■□□ 2.46
MCF2L-212ENST00000420013 ROBO2Q9HCK4 1378 aa30.39■■■□□ 2.45
MCF2L-212ENST00000420013 CDC42BPGQ6DT37 1551 aa30.38■■■□□ 2.45
MCF2L-212ENST00000420013 FOXD1Q16676 465 aa30.37■■■□□ 2.45
MCF2L-212ENST00000420013 C1orf167Q5SNV9 1468 aa30.36■■■□□ 2.45
MCF2L-212ENST00000420013 TECPR2O15040 1411 aa30.34■■■□□ 2.45
MCF2L-212ENST00000420013 POTEAQ6S8J7 498 aa30.34■■■□□ 2.45
MCF2L-212ENST00000420013 PIK3C2GO75747 1445 aa30.32■■■□□ 2.44
MCF2L-212ENST00000420013 ADGRF5Q8IZF2 1346 aa30.28■■■□□ 2.44
MCF2L-212ENST00000420013 MEX3CQ5U5Q3 659 aaKnown RBP30.28■■■□□ 2.44
MCF2L-212ENST00000420013 MYOM2P54296 1465 aa30.27■■■□□ 2.44
MCF2L-212ENST00000420013 LRRC59Q96AG4 307 aaKnown RBP30.26■■■□□ 2.43
MCF2L-212ENST00000420013 LRPPRCP42704 1394 aaKnown RBP30.25■■■□□ 2.43
MCF2L-212ENST00000420013 RAB3GAP2Q9H2M9 1393 aa30.25■■■□□ 2.43
MCF2L-212ENST00000420013 NRXN1Q9ULB1 1477 aa30.24■■■□□ 2.43
MCF2L-212ENST00000420013 RGL3Q3MIN7 710 aa30.23■■■□□ 2.43
MCF2L-212ENST00000420013 ZNF772Q68DY9 489 aaPredicted RBP30.23■■■□□ 2.43
MCF2L-212ENST00000420013 PNPLA6Q8IY17 1366 aa30.23■■■□□ 2.43
MCF2L-212ENST00000420013 ABCC11Q96J66 1382 aa30.21■■■□□ 2.43
MCF2L-212ENST00000420013 COL22A1Q8NFW1 1626 aaPredicted RBP30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms