RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 FOXD1Q16676 465 aa29.14■■■□□ 2.26
RPUSD3-202ENST00000418713 NEURL4Q96JN8 1562 aa29.13■■■□□ 2.25
RPUSD3-202ENST00000418713 RIMS2Q9UQ26 1411 aa29.13■■■□□ 2.25
RPUSD3-202ENST00000418713 IQGAP1P46940 1657 aa29.12■■■□□ 2.25
RPUSD3-202ENST00000418713 KIF1BO60333 1816 aa29.11■■■□□ 2.25
RPUSD3-202ENST00000418713 RPGRIP1LQ68CZ1 1315 aa29.11■■■□□ 2.25
RPUSD3-202ENST00000418713 ZFYVE9O95405 1425 aa29.08■■■□□ 2.25
RPUSD3-202ENST00000418713 CLTCL1P53675 1640 aa29.08■■■□□ 2.25
RPUSD3-202ENST00000418713 CERKQ8TCT0 537 aa29.07■■■□□ 2.24
RPUSD3-202ENST00000418713 MYO5BQ9ULV0 1848 aa29.07■■■□□ 2.24
RPUSD3-202ENST00000418713 PLEKHG1Q9ULL1 1385 aa29.06■■■□□ 2.24
RPUSD3-202ENST00000418713 VGFO15240 615 aaPredicted RBP29.05■■■□□ 2.24
RPUSD3-202ENST00000418713 ZNF335Q9H4Z2 1342 aaPredicted RBP29.03■■■□□ 2.24
RPUSD3-202ENST00000418713 TBX22Q9Y458 520 aa29■■■□□ 2.23
RPUSD3-202ENST00000418713 NUTM2DQ5VT03 806 aaPredicted RBP28.98■■■□□ 2.23
RPUSD3-202ENST00000418713 ANKRD30BQ9BXX2 1392 aa28.98■■■□□ 2.23
RPUSD3-202ENST00000418713 SLC26A8Q96RN1 970 aa28.97■■■□□ 2.23
RPUSD3-202ENST00000418713 CPS1P31327 1500 aa28.97■■■□□ 2.23
RPUSD3-202ENST00000418713 LTBP4Q8N2S1 1624 aa28.96■■■□□ 2.23
RPUSD3-202ENST00000418713 RGL3Q3MIN7 710 aa28.95■■■□□ 2.22
RPUSD3-202ENST00000418713 IQSEC2Q5JU85 1478 aa28.94■■■□□ 2.22
RPUSD3-202ENST00000418713 KCNA6P17658 529 aa28.94■■■□□ 2.22
RPUSD3-202ENST00000418713 STAC3Q96MF2 364 aa28.9■■■□□ 2.22
RPUSD3-202ENST00000418713 PIK3R4Q99570 1358 aa28.89■■■□□ 2.22
RPUSD3-202ENST00000418713 SPATA31E1Q6ZUB1 1445 aa28.89■■■□□ 2.22
RPUSD3-202ENST00000418713 NEXMIFQ5QGS0 1516 aa28.89■■■□□ 2.21
RPUSD3-202ENST00000418713 DIP2AQ14689 1571 aa28.88■■■□□ 2.21
RPUSD3-202ENST00000418713 SENP3Q9H4L4 574 aaPredicted RBP28.85■■■□□ 2.21
RPUSD3-202ENST00000418713 ADAMTS13Q76LX8 1427 aa28.83■■■□□ 2.21
RPUSD3-202ENST00000418713 SETBP1Q9Y6X0 1596 aa28.82■■■□□ 2.2
RPUSD3-202ENST00000418713 PROSER2Q86WR7 435 aaPredicted RBP28.8■■■□□ 2.2
RPUSD3-202ENST00000418713 PPLO60437 1756 aa28.8■■■□□ 2.2
RPUSD3-202ENST00000418713 TOM1O60784 492 aa28.77■■■□□ 2.2
RPUSD3-202ENST00000418713 AMOTL2Q9Y2J4 779 aa28.76■■■□□ 2.19
RPUSD3-202ENST00000418713 NKTRP30414 1462 aaKnown RBP28.76■■■□□ 2.19
RPUSD3-202ENST00000418713 PCGF6Q9BYE7 350 aa28.75■■■□□ 2.19
RPUSD3-202ENST00000418713 LRRC7Q96NW7 1537 aa28.74■■■□□ 2.19
RPUSD3-202ENST00000418713 CHD2O14647 1828 aaKnown RBP28.74■■■□□ 2.19
RPUSD3-202ENST00000418713 ADGRF5Q8IZF2 1346 aa28.72■■■□□ 2.19
RPUSD3-202ENST00000418713 NWD1Q149M9 1564 aa28.72■■■□□ 2.19
RPUSD3-202ENST00000418713 DHX57Q6P158 1386 aaKnown RBP28.72■■■□□ 2.19
RPUSD3-202ENST00000418713 STRCP1A6NGW2 1772 aa28.71■■■□□ 2.19
RPUSD3-202ENST00000418713 UBAP1LF5GYI3 381 aa28.71■■■□□ 2.19
RPUSD3-202ENST00000418713 DCAF11Q8TEB1 546 aa28.71■■■□□ 2.19
RPUSD3-202ENST00000418713 NCOA3Q9Y6Q9 1424 aa28.7■■■□□ 2.19
RPUSD3-202ENST00000418713 NRXN3Q9Y4C0 1643 aa28.69■■■□□ 2.18
RPUSD3-202ENST00000418713 MYOM2P54296 1465 aa28.69■■■□□ 2.18
RPUSD3-202ENST00000418713 TMEM94Q12767 1356 aa28.68■■■□□ 2.18
RPUSD3-202ENST00000418713 IFT172Q9UG01 1749 aa28.68■■■□□ 2.18
RPUSD3-202ENST00000418713 METP08581 1390 aa28.67■■■□□ 2.18
RPUSD3-202ENST00000418713 ALKQ9UM73 1620 aa28.67■■■□□ 2.18
RPUSD3-202ENST00000418713 KDM2AQ9Y2K7 1162 aa28.66■■■□□ 2.18
RPUSD3-202ENST00000418713 C14orf37Q86TY3 774 aa28.65■■■□□ 2.18
RPUSD3-202ENST00000418713 C14orf93Q9H972 538 aaKnown RBP28.65■■■□□ 2.18
RPUSD3-202ENST00000418713 PIK3C2GO75747 1445 aa28.65■■■□□ 2.18
RPUSD3-202ENST00000418713 MSH6P52701 1360 aa28.62■■■□□ 2.17
RPUSD3-202ENST00000418713 NRXN1Q9ULB1 1477 aa28.61■■■□□ 2.17
RPUSD3-202ENST00000418713 NEUROD1Q13562 356 aa28.61■■■□□ 2.17
RPUSD3-202ENST00000418713 PTPRUQ92729 1446 aa28.6■■■□□ 2.17
RPUSD3-202ENST00000418713 C19orf44Q9H6X5 657 aa28.59■■■□□ 2.17
RPUSD3-202ENST00000418713 SIN3AQ96ST3 1273 aa28.58■■■□□ 2.17
RPUSD3-202ENST00000418713 LAMC1P11047 1609 aa28.56■■■□□ 2.16
RPUSD3-202ENST00000418713 CFAP70Q5T0N1 1121 aa28.56■■■□□ 2.16
RPUSD3-202ENST00000418713 XRN1Q8IZH2 1706 aaKnown RBP28.55■■■□□ 2.16
RPUSD3-202ENST00000418713 SCAF1Q9H7N4 1312 aaKnown RBP28.54■■■□□ 2.16
RPUSD3-202ENST00000418713 ATF3P18847 181 aa28.54■■■□□ 2.16
RPUSD3-202ENST00000418713 CADPS2Q86UW7 1296 aa28.54■■■□□ 2.16
RPUSD3-202ENST00000418713 RBM33Q96EV2 1170 aaKnown RBP28.54■■■□□ 2.16
RPUSD3-202ENST00000418713 PTCH1Q13635 1447 aa28.53■■■□□ 2.16
RPUSD3-202ENST00000418713 LRPPRCP42704 1394 aaKnown RBP28.53■■■□□ 2.16
RPUSD3-202ENST00000418713 ABCC11Q96J66 1382 aa28.53■■■□□ 2.16
RPUSD3-202ENST00000418713 SETD1AO15047 1707 aaKnown RBP28.53■■■□□ 2.16
RPUSD3-202ENST00000418713 SIRT1Q96EB6 747 aa28.53■■■□□ 2.16
RPUSD3-202ENST00000418713 PRAG1Q86YV5 1406 aa28.52■■■□□ 2.16
RPUSD3-202ENST00000418713 PIP4K2BP78356 416 aa28.52■■■□□ 2.16
RPUSD3-202ENST00000418713 TMEM132EQ6IEE7 984 aa28.51■■■□□ 2.15
RPUSD3-202ENST00000418713 XIRP1Q702N8 1843 aaKnown RBP28.5■■■□□ 2.15
RPUSD3-202ENST00000418713 CLSPNQ9HAW4 1339 aa28.5■■■□□ 2.15
RPUSD3-202ENST00000418713 L3MBTL2Q969R5 705 aa28.5■■■□□ 2.15
RPUSD3-202ENST00000418713 STK26Q9P289 416 aa28.5■■■□□ 2.15
RPUSD3-202ENST00000418713 YTHDC2Q9H6S0 1430 aaKnown RBP28.48■■■□□ 2.15
RPUSD3-202ENST00000418713 TECPR2O15040 1411 aa28.46■■■□□ 2.15
RPUSD3-202ENST00000418713 SLAIN2Q9P270 581 aa28.46■■■□□ 2.15
RPUSD3-202ENST00000418713 TONSLQ96HA7 1378 aa28.46■■■□□ 2.15
RPUSD3-202ENST00000418713 DCCP43146 1447 aa28.45■■■□□ 2.15
RPUSD3-202ENST00000418713 ROBO2Q9HCK4 1378 aa28.45■■■□□ 2.14
RPUSD3-202ENST00000418713 FAM135BQ49AJ0 1406 aa28.42■■■□□ 2.14
RPUSD3-202ENST00000418713 ADGRL3Q9HAR2 1447 aa28.42■■■□□ 2.14
RPUSD3-202ENST00000418713 POGKQ9P215 609 aa28.4■■■□□ 2.14
RPUSD3-202ENST00000418713 TIMELESSQ9UNS1 1208 aa28.39■■■□□ 2.14
RPUSD3-202ENST00000418713 KNDC1Q76NI1 1749 aa28.38■■■□□ 2.13
RPUSD3-202ENST00000418713 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.38■■■□□ 2.13
RPUSD3-202ENST00000418713 KIAA1210Q9ULL0 1709 aa28.38■■■□□ 2.13
RPUSD3-202ENST00000418713 CCER1Q8TC90 406 aaPredicted RBP28.36■■■□□ 2.13
RPUSD3-202ENST00000418713 ASXL1Q8IXJ9 1541 aa28.36■■■□□ 2.13
RPUSD3-202ENST00000418713 WAPLQ7Z5K2 1190 aa28.35■■■□□ 2.13
RPUSD3-202ENST00000418713 TRAK1Q9UPV9 953 aa28.35■■■□□ 2.13
RPUSD3-202ENST00000418713 DLC1Q96QB1 1528 aa28.34■■■□□ 2.13
RPUSD3-202ENST00000418713 ADGRB1O14514 1584 aa28.33■■■□□ 2.13
RPUSD3-202ENST00000418713 PRAM1Q96QH2 718 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms