RNA–Protein interactions for RNA: ENST00000417464.6

UPP1-205, Transcript of uridine phosphorylase 1, humanhuman

TSL 1 (best)

Gene UPP1, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP1-205ENST00000417464 FOXD1Q16676 465 aa29.01■■■□□ 2.23
UPP1-205ENST00000417464 SLC4A1APQ9BWU0 796 aaKnown RBP29.01■■■□□ 2.23
UPP1-205ENST00000417464 CLTCL1P53675 1640 aa29■■■□□ 2.23
UPP1-205ENST00000417464 UBAP1LF5GYI3 381 aa28.98■■■□□ 2.23
UPP1-205ENST00000417464 PPP1R15AO75807 674 aaPredicted RBP28.98■■■□□ 2.23
UPP1-205ENST00000417464 BCANQ96GW7 911 aa28.98■■■□□ 2.23
UPP1-205ENST00000417464 TRPM2O94759 1503 aa28.98■■■□□ 2.23
UPP1-205ENST00000417464 LRRC7Q96NW7 1537 aa28.95■■■□□ 2.23
UPP1-205ENST00000417464 PLEKHG1Q9ULL1 1385 aa28.93■■■□□ 2.22
UPP1-205ENST00000417464 SETD5Q9C0A6 1442 aa28.93■■■□□ 2.22
UPP1-205ENST00000417464 ZNF326Q5BKZ1 582 aaKnown RBP28.89■■■□□ 2.22
UPP1-205ENST00000417464 RAB3GAP2Q9H2M9 1393 aa28.88■■■□□ 2.21
UPP1-205ENST00000417464 RBM33Q96EV2 1170 aaKnown RBP28.88■■■□□ 2.21
UPP1-205ENST00000417464 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.87■■■□□ 2.21
UPP1-205ENST00000417464 MPHOSPH9Q99550 1183 aa28.87■■■□□ 2.21
UPP1-205ENST00000417464 ALKQ9UM73 1620 aa28.85■■■□□ 2.21
UPP1-205ENST00000417464 PIP4K2BP78356 416 aa28.85■■■□□ 2.21
UPP1-205ENST00000417464 ADAMTS13Q76LX8 1427 aa28.85■■■□□ 2.21
UPP1-205ENST00000417464 HDGFP51858 240 aaKnown RBP28.84■■■□□ 2.21
UPP1-205ENST00000417464 SCAF1Q9H7N4 1312 aaKnown RBP28.84■■■□□ 2.21
UPP1-205ENST00000417464 KCNA6P17658 529 aa28.82■■■□□ 2.2
UPP1-205ENST00000417464 NEXMIFQ5QGS0 1516 aa28.81■■■□□ 2.2
UPP1-205ENST00000417464 NWD1Q149M9 1564 aa28.8■■■□□ 2.2
UPP1-205ENST00000417464 TMEM94Q12767 1356 aa28.79■■■□□ 2.2
UPP1-205ENST00000417464 XIRP1Q702N8 1843 aaKnown RBP28.79■■■□□ 2.2
UPP1-205ENST00000417464 NRXN3Q9Y4C0 1643 aa28.77■■■□□ 2.2
UPP1-205ENST00000417464 KIF1BO60333 1816 aa28.77■■■□□ 2.2
UPP1-205ENST00000417464 TOM1O60784 492 aa28.76■■■□□ 2.19
UPP1-205ENST00000417464 PROSER2Q86WR7 435 aaPredicted RBP28.76■■■□□ 2.19
UPP1-205ENST00000417464 TBX22Q9Y458 520 aa28.76■■■□□ 2.19
UPP1-205ENST00000417464 NKTRP30414 1462 aaKnown RBP28.73■■■□□ 2.19
UPP1-205ENST00000417464 DIP2AQ14689 1571 aa28.72■■■□□ 2.19
UPP1-205ENST00000417464 CCDC144AA2RUR9 1427 aa28.72■■■□□ 2.19
UPP1-205ENST00000417464 PTPRUQ92729 1446 aa28.72■■■□□ 2.19
UPP1-205ENST00000417464 SETBP1Q9Y6X0 1596 aa28.71■■■□□ 2.19
UPP1-205ENST00000417464 CHD2O14647 1828 aaKnown RBP28.71■■■□□ 2.19
UPP1-205ENST00000417464 METP08581 1390 aa28.68■■■□□ 2.18
UPP1-205ENST00000417464 HSPA1LP34931 641 aa28.67■■■□□ 2.18
UPP1-205ENST00000417464 RGL3Q3MIN7 710 aa28.67■■■□□ 2.18
UPP1-205ENST00000417464 SPATA31E1Q6ZUB1 1445 aa28.65■■■□□ 2.18
UPP1-205ENST00000417464 AMOTL2Q9Y2J4 779 aa28.64■■■□□ 2.18
UPP1-205ENST00000417464 PIK3R4Q99570 1358 aa28.62■■■□□ 2.17
UPP1-205ENST00000417464 PPLO60437 1756 aa28.61■■■□□ 2.17
UPP1-205ENST00000417464 VGFO15240 615 aaPredicted RBP28.59■■■□□ 2.17
UPP1-205ENST00000417464 XRN1Q8IZH2 1706 aaKnown RBP28.58■■■□□ 2.17
UPP1-205ENST00000417464 RPGRIP1LQ68CZ1 1315 aa28.58■■■□□ 2.17
UPP1-205ENST00000417464 ADGRF5Q8IZF2 1346 aa28.58■■■□□ 2.17
UPP1-205ENST00000417464 ACIN1Q9UKV3 1341 aaKnown RBP28.57■■■□□ 2.16
UPP1-205ENST00000417464 MSH6P52701 1360 aa28.56■■■□□ 2.16
UPP1-205ENST00000417464 C14orf37Q86TY3 774 aa28.56■■■□□ 2.16
UPP1-205ENST00000417464 SETD1AO15047 1707 aaKnown RBP28.55■■■□□ 2.16
UPP1-205ENST00000417464 ANKRD30BQ9BXX2 1392 aa28.53■■■□□ 2.16
UPP1-205ENST00000417464 IFT172Q9UG01 1749 aa28.52■■■□□ 2.16
UPP1-205ENST00000417464 HRCP23327 699 aa28.5■■■□□ 2.15
UPP1-205ENST00000417464 ROBO1Q9Y6N7 1651 aa28.47■■■□□ 2.15
UPP1-205ENST00000417464 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.46■■■□□ 2.15
UPP1-205ENST00000417464 ROBO2Q9HCK4 1378 aa28.45■■■□□ 2.14
UPP1-205ENST00000417464 FAM135BQ49AJ0 1406 aa28.44■■■□□ 2.14
UPP1-205ENST00000417464 NCOA3Q9Y6Q9 1424 aa28.44■■■□□ 2.14
UPP1-205ENST00000417464 SLAIN2Q9P270 581 aa28.44■■■□□ 2.14
UPP1-205ENST00000417464 DISP3Q9P2K9 1392 aa28.44■■■□□ 2.14
UPP1-205ENST00000417464 ASXL1Q8IXJ9 1541 aa28.43■■■□□ 2.14
UPP1-205ENST00000417464 PIK3C2GO75747 1445 aa28.43■■■□□ 2.14
UPP1-205ENST00000417464 C19orf44Q9H6X5 657 aa28.42■■■□□ 2.14
UPP1-205ENST00000417464 TMEM132EQ6IEE7 984 aa28.4■■■□□ 2.14
UPP1-205ENST00000417464 ATF3P18847 181 aa28.39■■■□□ 2.14
UPP1-205ENST00000417464 STK26Q9P289 416 aa28.39■■■□□ 2.14
UPP1-205ENST00000417464 NALCNQ8IZF0 1738 aa28.38■■■□□ 2.13
UPP1-205ENST00000417464 PTCH1Q13635 1447 aa28.38■■■□□ 2.13
UPP1-205ENST00000417464 ADGRL3Q9HAR2 1447 aa28.37■■■□□ 2.13
UPP1-205ENST00000417464 MYOM2P54296 1465 aa28.36■■■□□ 2.13
UPP1-205ENST00000417464 CADPS2Q86UW7 1296 aa28.36■■■□□ 2.13
UPP1-205ENST00000417464 NRXN1Q9ULB1 1477 aa28.35■■■□□ 2.13
UPP1-205ENST00000417464 MED1Q15648 1581 aaPredicted RBP28.33■■■□□ 2.13
UPP1-205ENST00000417464 CFAP70Q5T0N1 1121 aa28.33■■■□□ 2.13
UPP1-205ENST00000417464 KDM2AQ9Y2K7 1162 aa28.33■■■□□ 2.13
UPP1-205ENST00000417464 PRAG1Q86YV5 1406 aa28.32■■■□□ 2.12
UPP1-205ENST00000417464 DCCP43146 1447 aa28.31■■■□□ 2.12
UPP1-205ENST00000417464 MST1RQ04912 1400 aa28.31■■■□□ 2.12
UPP1-205ENST00000417464 LRPPRCP42704 1394 aaKnown RBP28.29■■■□□ 2.12
UPP1-205ENST00000417464 DHX57Q6P158 1386 aaKnown RBP28.29■■■□□ 2.12
UPP1-205ENST00000417464 PLEKHH1Q9ULM0 1364 aa28.29■■■□□ 2.12
UPP1-205ENST00000417464 WAPLQ7Z5K2 1190 aa28.29■■■□□ 2.12
UPP1-205ENST00000417464 DCAF11Q8TEB1 546 aa28.29■■■□□ 2.12
UPP1-205ENST00000417464 BRINP3Q76B58 766 aa28.28■■■□□ 2.12
UPP1-205ENST00000417464 C14orf93Q9H972 538 aaKnown RBP28.28■■■□□ 2.12
UPP1-205ENST00000417464 YTHDC2Q9H6S0 1430 aaKnown RBP28.26■■■□□ 2.12
UPP1-205ENST00000417464 PHLPP1O60346 1717 aa28.26■■■□□ 2.12
UPP1-205ENST00000417464 ILDR2Q71H61 639 aa28.25■■■□□ 2.11
UPP1-205ENST00000417464 TECPR2O15040 1411 aa28.24■■■□□ 2.11
UPP1-205ENST00000417464 COL16A1Q07092 1604 aaPredicted RBP28.22■■■□□ 2.11
UPP1-205ENST00000417464 DDX17Q92841 729 aaKnown RBP28.22■■■□□ 2.11
UPP1-205ENST00000417464 ABCC11Q96J66 1382 aa28.22■■■□□ 2.11
UPP1-205ENST00000417464 LAMC1P11047 1609 aa28.21■■■□□ 2.11
UPP1-205ENST00000417464 KNDC1Q76NI1 1749 aa28.21■■■□□ 2.11
UPP1-205ENST00000417464 AHDC1Q5TGY3 1603 aaPredicted RBP28.19■■■□□ 2.1
UPP1-205ENST00000417464 C1orf167Q5SNV9 1468 aa28.19■■■□□ 2.1
UPP1-205ENST00000417464 ADGRB1O14514 1584 aa28.18■■■□□ 2.1
UPP1-205ENST00000417464 TRIM26Q12899 539 aaPredicted RBP28.17■■■□□ 2.1
UPP1-205ENST00000417464 SIN3AQ96ST3 1273 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms