RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 NWD1Q149M9 1564 aa15.61■□□□□ 0.09
MDC1-202ENST00000416571 MSH6P52701 1360 aa15.61■□□□□ 0.09
MDC1-202ENST00000416571 RBM33Q96EV2 1170 aaKnown RBP15.6■□□□□ 0.09
MDC1-202ENST00000416571 PPP1R15AO75807 674 aaPredicted RBP15.59■□□□□ 0.09
MDC1-202ENST00000416571 ADGRL2O95490 1459 aa15.59■□□□□ 0.09
MDC1-202ENST00000416571 RPRD2Q5VT52 1461 aaKnown RBP15.59■□□□□ 0.09
MDC1-202ENST00000416571 GCC2Q8IWJ2 1684 aa15.57■□□□□ 0.08
MDC1-202ENST00000416571 MYO5BQ9ULV0 1848 aa15.57■□□□□ 0.08
MDC1-202ENST00000416571 HDGFP51858 240 aaKnown RBP15.57■□□□□ 0.08
MDC1-202ENST00000416571 FAM50AQ14320 339 aaKnown RBP15.57■□□□□ 0.08
MDC1-202ENST00000416571 PHLPP1O60346 1717 aa15.57■□□□□ 0.08
MDC1-202ENST00000416571 POTEAQ6S8J7 498 aa15.56■□□□□ 0.08
MDC1-202ENST00000416571 ANKRD50Q9ULJ7 1429 aa15.56■□□□□ 0.08
MDC1-202ENST00000416571 CHD2O14647 1828 aaKnown RBP15.55■□□□□ 0.08
MDC1-202ENST00000416571 RIMS2Q9UQ26 1411 aa15.54■□□□□ 0.08
MDC1-202ENST00000416571 PLEKHG1Q9ULL1 1385 aa15.54■□□□□ 0.08
MDC1-202ENST00000416571 SLAIN2Q9P270 581 aa15.54■□□□□ 0.08
MDC1-202ENST00000416571 ZFYVE9O95405 1425 aa15.53■□□□□ 0.08
MDC1-202ENST00000416571 C14orf37Q86TY3 774 aa15.53■□□□□ 0.08
MDC1-202ENST00000416571 CHGAP10645 457 aaKnown RBP15.52■□□□□ 0.08
MDC1-202ENST00000416571 TMEM131LA2VDJ0 1609 aa15.52■□□□□ 0.08
MDC1-202ENST00000416571 JCADQ9P266 1359 aa15.51■□□□□ 0.07
MDC1-202ENST00000416571 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.51■□□□□ 0.07
MDC1-202ENST00000416571 UNC13BO14795 1591 aa15.5■□□□□ 0.07
MDC1-202ENST00000416571 TBX22Q9Y458 520 aa15.49■□□□□ 0.07
MDC1-202ENST00000416571 COL16A1Q07092 1604 aaPredicted RBP15.48■□□□□ 0.07
MDC1-202ENST00000416571 NCOA3Q9Y6Q9 1424 aa15.48■□□□□ 0.07
MDC1-202ENST00000416571 DIP2AQ14689 1571 aa15.48■□□□□ 0.07
MDC1-202ENST00000416571 E9PCH4 1651 aa15.48■□□□□ 0.07
MDC1-202ENST00000416571 UPF1Q92900 1129 aaKnown RBP eCLIP15.47■□□□□ 0.07
MDC1-202ENST00000416571 MEX3CQ5U5Q3 659 aaKnown RBP15.46■□□□□ 0.07
MDC1-202ENST00000416571 CADPS2Q86UW7 1296 aa15.46■□□□□ 0.07
MDC1-202ENST00000416571 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.46■□□□□ 0.06
MDC1-202ENST00000416571 ATF3P18847 181 aa15.45■□□□□ 0.06
MDC1-202ENST00000416571 NUTM2DQ5VT03 806 aaPredicted RBP15.45■□□□□ 0.06
MDC1-202ENST00000416571 SPATA31A6Q5VVP1 1343 aa15.44■□□□□ 0.06
MDC1-202ENST00000416571 IQGAP3Q86VI3 1631 aa15.44■□□□□ 0.06
MDC1-202ENST00000416571 PIK3R4Q99570 1358 aa15.44■□□□□ 0.06
MDC1-202ENST00000416571 ADAMTS13Q76LX8 1427 aa15.43■□□□□ 0.06
MDC1-202ENST00000416571 TRPM2O94759 1503 aa15.43■□□□□ 0.06
MDC1-202ENST00000416571 C19orf44Q9H6X5 657 aa15.43■□□□□ 0.06
MDC1-202ENST00000416571 AHDC1Q5TGY3 1603 aaPredicted RBP15.43■□□□□ 0.06
MDC1-202ENST00000416571 SHPRHQ149N8 1683 aa15.41■□□□□ 0.06
MDC1-202ENST00000416571 ZNF772Q68DY9 489 aaPredicted RBP15.41■□□□□ 0.06
MDC1-202ENST00000416571 LRP6O75581 1613 aa15.41■□□□□ 0.06
MDC1-202ENST00000416571 NUP155O75694 1391 aa15.4■□□□□ 0.06
MDC1-202ENST00000416571 ROCK1Q13464 1354 aa15.4■□□□□ 0.06
MDC1-202ENST00000416571 AMOTL2Q9Y2J4 779 aa15.39■□□□□ 0.05
MDC1-202ENST00000416571 TRIM52Q96A61 297 aa15.37■□□□□ 0.05
MDC1-202ENST00000416571 DCCP43146 1447 aa15.36■□□□□ 0.05
MDC1-202ENST00000416571 ITGAEP38570 1179 aa15.36■□□□□ 0.05
MDC1-202ENST00000416571 SPHKAPQ2M3C7 1700 aa15.36■□□□□ 0.05
MDC1-202ENST00000416571 NUTM2BA6NNL0 878 aaPredicted RBP15.35■□□□□ 0.05
MDC1-202ENST00000416571 NUTM2EB1AL46 878 aaPredicted RBP15.35■□□□□ 0.05
MDC1-202ENST00000416571 ZNF326Q5BKZ1 582 aaKnown RBP15.35■□□□□ 0.05
MDC1-202ENST00000416571 BRINP3Q76B58 766 aa15.35■□□□□ 0.05
MDC1-202ENST00000416571 NUTM2AQ8IVF1 878 aaPredicted RBP15.35■□□□□ 0.05
MDC1-202ENST00000416571 PTPRUQ92729 1446 aa15.34■□□□□ 0.05
MDC1-202ENST00000416571 XRN1Q8IZH2 1706 aaKnown RBP15.34■□□□□ 0.05
MDC1-202ENST00000416571 ASXL1Q8IXJ9 1541 aa15.33■□□□□ 0.05
MDC1-202ENST00000416571 SETBP1Q9Y6X0 1596 aa15.33■□□□□ 0.05
MDC1-202ENST00000416571 NRXN3Q9Y4C0 1643 aa15.33■□□□□ 0.04
MDC1-202ENST00000416571 RXRBP28702 533 aa15.33■□□□□ 0.04
MDC1-202ENST00000416571 NHSL1Q5SYE7 1610 aa15.32■□□□□ 0.04
MDC1-202ENST00000416571 MST1RQ04912 1400 aa15.3■□□□□ 0.04
MDC1-202ENST00000416571 SETD5Q9C0A6 1442 aa15.29■□□□□ 0.04
MDC1-202ENST00000416571 AFF2P51816 1311 aa15.29■□□□□ 0.04
MDC1-202ENST00000416571 LRRC59Q96AG4 307 aaKnown RBP15.29■□□□□ 0.04
MDC1-202ENST00000416571 CDK12Q9NYV4 1490 aaPredicted RBP15.28■□□□□ 0.04
MDC1-202ENST00000416571 ADGRL3Q9HAR2 1447 aa15.27■□□□□ 0.04
MDC1-202ENST00000416571 METP08581 1390 aa15.27■□□□□ 0.04
MDC1-202ENST00000416571 KIF1BO60333 1816 aa15.27■□□□□ 0.04
MDC1-202ENST00000416571 NALCNQ8IZF0 1738 aa15.27■□□□□ 0.04
MDC1-202ENST00000416571 NEXMIFQ5QGS0 1516 aa15.26■□□□□ 0.03
MDC1-202ENST00000416571 CLTCL1P53675 1640 aa15.25■□□□□ 0.03
MDC1-202ENST00000416571 C8orf37Q96NL8 207 aa15.25■□□□□ 0.03
MDC1-202ENST00000416571 PNPLA6Q8IY17 1366 aa15.24■□□□□ 0.03
MDC1-202ENST00000416571 PPARGC1BQ86YN6 1023 aaKnown RBP15.23■□□□□ 0.03
MDC1-202ENST00000416571 DDX17Q92841 729 aaKnown RBP15.23■□□□□ 0.03
MDC1-202ENST00000416571 RBM6P78332 1123 aaKnown RBP15.22■□□□□ 0.03
MDC1-202ENST00000416571 QTRT2Q9H974 415 aaKnown RBP15.22■□□□□ 0.03
MDC1-202ENST00000416571 NGLY1Q96IV0 654 aa15.2■□□□□ 0.02
MDC1-202ENST00000416571 C1orf167Q5SNV9 1468 aa15.2■□□□□ 0.02
MDC1-202ENST00000416571 RGS12O14924 1447 aa15.19■□□□□ 0.02
MDC1-202ENST00000416571 PTCH1Q13635 1447 aa15.19■□□□□ 0.02
MDC1-202ENST00000416571 VGFO15240 615 aaPredicted RBP15.19■□□□□ 0.02
MDC1-202ENST00000416571 ADAMTS2O95450 1211 aa15.19■□□□□ 0.02
MDC1-202ENST00000416571 LAMC1P11047 1609 aa15.17■□□□□ 0.02
MDC1-202ENST00000416571 ORAI2Q96SN7 254 aa15.16■□□□□ 0.02
MDC1-202ENST00000416571 ROBO2Q9HCK4 1378 aa15.15■□□□□ 0.02
MDC1-202ENST00000416571 IFFO2Q5TF58 517 aa15.15■□□□□ 0.02
MDC1-202ENST00000416571 SOS2Q07890 1332 aaPredicted RBP15.15■□□□□ 0.02
MDC1-202ENST00000416571 USP21Q9UK80 565 aa15.14■□□□□ 0.01
MDC1-202ENST00000416571 NAIPQ13075 1403 aa15.14■□□□□ 0.01
MDC1-202ENST00000416571 RPGRIP1LQ68CZ1 1315 aa15.14■□□□□ 0.01
MDC1-202ENST00000416571 ATAD2Q6PL18 1390 aa15.13■□□□□ 0.01
MDC1-202ENST00000416571 HFM1A2PYH4 1435 aa15.13■□□□□ 0.01
MDC1-202ENST00000416571 TRPC5Q9UL62 973 aaPredicted RBP15.13■□□□□ 0.01
MDC1-202ENST00000416571 PPLO60437 1756 aa15.13■□□□□ 0.01
MDC1-202ENST00000416571 PRAG1Q86YV5 1406 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms