RNA–Protein interactions for RNA: ENST00000416242.2

LINC01388-201, Transcript of long intergenic non-protein coding RNA 1388, humanhuman

TSL 3 BASIC

Gene LINC01388, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01388-201ENST00000416242 SLC4A1APQ9BWU0 796 aaKnown RBP21.34■■□□□ 1.01
LINC01388-201ENST00000416242 TOM1O60784 492 aa21.32■■□□□ 1
LINC01388-201ENST00000416242 BCANQ96GW7 911 aa21.32■■□□□ 1
LINC01388-201ENST00000416242 TRPM2O94759 1503 aa21.31■■□□□ 1
LINC01388-201ENST00000416242 KCNA6P17658 529 aa21.29■■□□□ 1
LINC01388-201ENST00000416242 SLC26A8Q96RN1 970 aa21.29■■□□□ 1
LINC01388-201ENST00000416242 LRRC7Q96NW7 1537 aa21.29■■□□□ 1
LINC01388-201ENST00000416242 SPHKAPQ2M3C7 1700 aa21.28■■□□□ 1
LINC01388-201ENST00000416242 TBX22Q9Y458 520 aa21.26■□□□□ 0.99
LINC01388-201ENST00000416242 SETD5Q9C0A6 1442 aa21.25■□□□□ 0.99
LINC01388-201ENST00000416242 ZNF326Q5BKZ1 582 aaKnown RBP21.24■□□□□ 0.99
LINC01388-201ENST00000416242 NKTRP30414 1462 aaKnown RBP21.24■□□□□ 0.99
LINC01388-201ENST00000416242 PIK3R4Q99570 1358 aa21.23■□□□□ 0.99
LINC01388-201ENST00000416242 DIP2AQ14689 1571 aa21.23■□□□□ 0.99
LINC01388-201ENST00000416242 MPHOSPH9Q99550 1183 aa21.21■□□□□ 0.99
LINC01388-201ENST00000416242 NWD1Q149M9 1564 aa21.2■□□□□ 0.98
LINC01388-201ENST00000416242 CLTCL1P53675 1640 aa21.2■□□□□ 0.98
LINC01388-201ENST00000416242 ADAMTS13Q76LX8 1427 aa21.2■□□□□ 0.98
LINC01388-201ENST00000416242 TMEM94Q12767 1356 aa21.19■□□□□ 0.98
LINC01388-201ENST00000416242 STRCP1A6NGW2 1772 aa21.18■□□□□ 0.98
LINC01388-201ENST00000416242 NUTM2DQ5VT03 806 aaPredicted RBP21.18■□□□□ 0.98
LINC01388-201ENST00000416242 RPGRIP1LQ68CZ1 1315 aa21.18■□□□□ 0.98
LINC01388-201ENST00000416242 PIP4K2BP78356 416 aa21.17■□□□□ 0.98
LINC01388-201ENST00000416242 PROSER2Q86WR7 435 aaPredicted RBP21.17■□□□□ 0.98
LINC01388-201ENST00000416242 SCAF1Q9H7N4 1312 aaKnown RBP21.17■□□□□ 0.98
LINC01388-201ENST00000416242 CCDC144AA2RUR9 1427 aa21.17■□□□□ 0.98
LINC01388-201ENST00000416242 MYO5BQ9ULV0 1848 aa21.17■□□□□ 0.98
LINC01388-201ENST00000416242 RAB3GAP2Q9H2M9 1393 aa21.16■□□□□ 0.98
LINC01388-201ENST00000416242 NCOA3Q9Y6Q9 1424 aa21.15■□□□□ 0.98
LINC01388-201ENST00000416242 VGFO15240 615 aaPredicted RBP21.15■□□□□ 0.98
LINC01388-201ENST00000416242 SETBP1Q9Y6X0 1596 aa21.14■□□□□ 0.98
LINC01388-201ENST00000416242 HRCP23327 699 aa21.14■□□□□ 0.97
LINC01388-201ENST00000416242 NEXMIFQ5QGS0 1516 aa21.13■□□□□ 0.97
LINC01388-201ENST00000416242 FOXD1Q16676 465 aa21.12■□□□□ 0.97
LINC01388-201ENST00000416242 SENP3Q9H4L4 574 aaPredicted RBP21.12■□□□□ 0.97
LINC01388-201ENST00000416242 MSH6P52701 1360 aa21.11■□□□□ 0.97
LINC01388-201ENST00000416242 ALKQ9UM73 1620 aa21.09■□□□□ 0.97
LINC01388-201ENST00000416242 KIF1BO60333 1816 aa21.08■□□□□ 0.97
LINC01388-201ENST00000416242 AMOTL2Q9Y2J4 779 aa21.07■□□□□ 0.96
LINC01388-201ENST00000416242 HSPA1LP34931 641 aa21.06■□□□□ 0.96
LINC01388-201ENST00000416242 ANKRD30BQ9BXX2 1392 aa21.06■□□□□ 0.96
LINC01388-201ENST00000416242 FAM135BQ49AJ0 1406 aa21.05■□□□□ 0.96
LINC01388-201ENST00000416242 SPATA31E1Q6ZUB1 1445 aa21.04■□□□□ 0.96
LINC01388-201ENST00000416242 NRXN3Q9Y4C0 1643 aa21.04■□□□□ 0.96
LINC01388-201ENST00000416242 CHD2O14647 1828 aaKnown RBP21.04■□□□□ 0.96
LINC01388-201ENST00000416242 C14orf37Q86TY3 774 aa21.04■□□□□ 0.96
LINC01388-201ENST00000416242 METP08581 1390 aa21.03■□□□□ 0.96
LINC01388-201ENST00000416242 RBM33Q96EV2 1170 aaKnown RBP21.03■□□□□ 0.96
LINC01388-201ENST00000416242 PTPRUQ92729 1446 aa21.03■□□□□ 0.96
LINC01388-201ENST00000416242 C19orf44Q9H6X5 657 aa21.02■□□□□ 0.96
LINC01388-201ENST00000416242 CADPS2Q86UW7 1296 aa21.01■□□□□ 0.95
LINC01388-201ENST00000416242 XIRP1Q702N8 1843 aaKnown RBP21■□□□□ 0.95
LINC01388-201ENST00000416242 RGL3Q3MIN7 710 aa20.99■□□□□ 0.95
LINC01388-201ENST00000416242 DCCP43146 1447 aa20.98■□□□□ 0.95
LINC01388-201ENST00000416242 ATF3P18847 181 aa20.98■□□□□ 0.95
LINC01388-201ENST00000416242 SLAIN2Q9P270 581 aa20.98■□□□□ 0.95
LINC01388-201ENST00000416242 XRN1Q8IZH2 1706 aaKnown RBP20.98■□□□□ 0.95
LINC01388-201ENST00000416242 PRAG1Q86YV5 1406 aa20.97■□□□□ 0.95
LINC01388-201ENST00000416242 PTCH1Q13635 1447 aa20.96■□□□□ 0.95
LINC01388-201ENST00000416242 DISP3Q9P2K9 1392 aa20.96■□□□□ 0.95
LINC01388-201ENST00000416242 ADGRF5Q8IZF2 1346 aa20.94■□□□□ 0.94
LINC01388-201ENST00000416242 PPLO60437 1756 aa20.94■□□□□ 0.94
LINC01388-201ENST00000416242 PIK3C2GO75747 1445 aa20.92■□□□□ 0.94
LINC01388-201ENST00000416242 MYOM2P54296 1465 aa20.91■□□□□ 0.94
LINC01388-201ENST00000416242 ADGRL3Q9HAR2 1447 aa20.91■□□□□ 0.94
LINC01388-201ENST00000416242 STAC3Q96MF2 364 aa20.9■□□□□ 0.94
LINC01388-201ENST00000416242 ROBO2Q9HCK4 1378 aa20.87■□□□□ 0.93
LINC01388-201ENST00000416242 ROBO1Q9Y6N7 1651 aa20.87■□□□□ 0.93
LINC01388-201ENST00000416242 NRXN1Q9ULB1 1477 aa20.87■□□□□ 0.93
LINC01388-201ENST00000416242 SETD1AO15047 1707 aaKnown RBP20.87■□□□□ 0.93
LINC01388-201ENST00000416242 TECPR2O15040 1411 aa20.86■□□□□ 0.93
LINC01388-201ENST00000416242 LRPPRCP42704 1394 aaKnown RBP20.85■□□□□ 0.93
LINC01388-201ENST00000416242 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.85■□□□□ 0.93
LINC01388-201ENST00000416242 ABCC11Q96J66 1382 aa20.85■□□□□ 0.93
LINC01388-201ENST00000416242 IFT172Q9UG01 1749 aa20.84■□□□□ 0.93
LINC01388-201ENST00000416242 C14orf93Q9H972 538 aaKnown RBP20.84■□□□□ 0.93
LINC01388-201ENST00000416242 MST1RQ04912 1400 aa20.82■□□□□ 0.92
LINC01388-201ENST00000416242 MED1Q15648 1581 aaPredicted RBP20.81■□□□□ 0.92
LINC01388-201ENST00000416242 BRINP3Q76B58 766 aa20.81■□□□□ 0.92
LINC01388-201ENST00000416242 SIRT1Q96EB6 747 aa20.79■□□□□ 0.92
LINC01388-201ENST00000416242 DHX57Q6P158 1386 aaKnown RBP20.79■□□□□ 0.92
LINC01388-201ENST00000416242 JCADQ9P266 1359 aa20.79■□□□□ 0.92
LINC01388-201ENST00000416242 YTHDC2Q9H6S0 1430 aaKnown RBP20.78■□□□□ 0.92
LINC01388-201ENST00000416242 LAMC1P11047 1609 aa20.78■□□□□ 0.92
LINC01388-201ENST00000416242 AHDC1Q5TGY3 1603 aaPredicted RBP20.78■□□□□ 0.92
LINC01388-201ENST00000416242 TMEM132EQ6IEE7 984 aa20.77■□□□□ 0.92
LINC01388-201ENST00000416242 DCAF11Q8TEB1 546 aa20.77■□□□□ 0.92
LINC01388-201ENST00000416242 PHF23Q9BUL5 403 aaPredicted RBP20.77■□□□□ 0.92
LINC01388-201ENST00000416242 STK26Q9P289 416 aa20.77■□□□□ 0.92
LINC01388-201ENST00000416242 CFAP70Q5T0N1 1121 aa20.76■□□□□ 0.91
LINC01388-201ENST00000416242 ASXL1Q8IXJ9 1541 aa20.76■□□□□ 0.91
LINC01388-201ENST00000416242 C1orf167Q5SNV9 1468 aa20.75■□□□□ 0.91
LINC01388-201ENST00000416242 NALCNQ8IZF0 1738 aa20.74■□□□□ 0.91
LINC01388-201ENST00000416242 CDC42BPGQ6DT37 1551 aa20.73■□□□□ 0.91
LINC01388-201ENST00000416242 PHLPP1O60346 1717 aa20.73■□□□□ 0.91
LINC01388-201ENST00000416242 KDM2AQ9Y2K7 1162 aa20.72■□□□□ 0.91
LINC01388-201ENST00000416242 KNDC1Q76NI1 1749 aa20.72■□□□□ 0.91
LINC01388-201ENST00000416242 SPATA31A6Q5VVP1 1343 aa20.72■□□□□ 0.91
LINC01388-201ENST00000416242 COL16A1Q07092 1604 aaPredicted RBP20.71■□□□□ 0.91
LINC01388-201ENST00000416242 WAPLQ7Z5K2 1190 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms