RNA–Protein interactions for RNA: ENST00000415938.7

PKD1-202, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 3,386 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-202ENST00000415938 SEC24BO95487 1268 aa17.37■□□□□ 0.37
PKD1-202ENST00000415938 CDC42BPAQ5VT25 1732 aa17.37■□□□□ 0.37
PKD1-202ENST00000415938 IGHDP01880 384 aa17.36■□□□□ 0.37
PKD1-202ENST00000415938 BECN1Q14457 450 aa17.36■□□□□ 0.37
PKD1-202ENST00000415938 ADCY10Q96PN6 1610 aa17.36■□□□□ 0.37
PKD1-202ENST00000415938 PRAG1Q86YV5 1406 aa17.36■□□□□ 0.37
PKD1-202ENST00000415938 UPF2Q9HAU5 1272 aaKnown RBP17.34■□□□□ 0.37
PKD1-202ENST00000415938 SHANK2Q9UPX8 1470 aa17.34■□□□□ 0.37
PKD1-202ENST00000415938 ARHGEF12Q9NZN5 1544 aa17.33■□□□□ 0.37
PKD1-202ENST00000415938 SYCP2Q9BX26 1530 aa17.33■□□□□ 0.36
PKD1-202ENST00000415938 SAFB2Q14151 953 aaKnown RBP eCLIP17.33■□□□□ 0.36
PKD1-202ENST00000415938 BLMP54132 1417 aaPredicted RBP17.33■□□□□ 0.36
PKD1-202ENST00000415938 SLFN5Q08AF3 891 aa17.32■□□□□ 0.36
PKD1-202ENST00000415938 MLECQ14165 292 aa17.32■□□□□ 0.36
PKD1-202ENST00000415938 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
PKD1-202ENST00000415938 SPAG9O60271 1321 aaKnown RBP17.31■□□□□ 0.36
PKD1-202ENST00000415938 PLEKHH2Q8IVE3 1493 aa17.3■□□□□ 0.36
PKD1-202ENST00000415938 CROCC2H7BZ55 1655 aa17.3■□□□□ 0.36
PKD1-202ENST00000415938 RAPGEF3O95398 923 aa17.29■□□□□ 0.36
PKD1-202ENST00000415938 CENPJQ9HC77 1338 aaPredicted RBP17.29■□□□□ 0.36
PKD1-202ENST00000415938 ZMYM4Q5VZL5 1548 aa17.29■□□□□ 0.36
PKD1-202ENST00000415938 COL17A1Q9UMD9 1497 aaPredicted RBP17.29■□□□□ 0.36
PKD1-202ENST00000415938 FAM135AQ9P2D6 1515 aa17.29■□□□□ 0.36
PKD1-202ENST00000415938 SAMD9LQ8IVG5 1584 aa17.27■□□□□ 0.36
PKD1-202ENST00000415938 NAP1L5Q96NT1 182 aaPredicted RBP17.27■□□□□ 0.36
PKD1-202ENST00000415938 A2MP01023 1474 aa17.26■□□□□ 0.35
PKD1-202ENST00000415938 AMER1Q5JTC6 1135 aaPredicted RBP17.26■□□□□ 0.35
PKD1-202ENST00000415938 TNNQ9UQP3 1299 aa17.26■□□□□ 0.35
PKD1-202ENST00000415938 OSCARQ8IYS5 282 aa17.25■□□□□ 0.35
PKD1-202ENST00000415938 E9PSI1 815 aa17.25■□□□□ 0.35
PKD1-202ENST00000415938 CHD1O14646 1710 aa17.24■□□□□ 0.35
PKD1-202ENST00000415938 CDCA8Q53HL2 280 aa17.24■□□□□ 0.35
PKD1-202ENST00000415938 FAM43AQ8N2R8 423 aa17.24■□□□□ 0.35
PKD1-202ENST00000415938 MFAP1P55081 439 aaKnown RBP17.23■□□□□ 0.35
PKD1-202ENST00000415938 KDM5DQ9BY66 1539 aa17.23■□□□□ 0.35
PKD1-202ENST00000415938 SCAPERQ9BY12 1400 aa17.23■□□□□ 0.35
PKD1-202ENST00000415938 ARHGEF5Q12774 1597 aa17.22■□□□□ 0.35
PKD1-202ENST00000415938 RSPH6AQ9H0K4 717 aa17.22■□□□□ 0.35
PKD1-202ENST00000415938 TTC37Q6PGP7 1564 aa17.22■□□□□ 0.35
PKD1-202ENST00000415938 CGNL1Q0VF96 1302 aa17.22■□□□□ 0.35
PKD1-202ENST00000415938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.22■□□□□ 0.35
PKD1-202ENST00000415938 E9PCH4 1651 aa17.21■□□□□ 0.35
PKD1-202ENST00000415938 MAGI2Q86UL8 1455 aa17.21■□□□□ 0.35
PKD1-202ENST00000415938 TRAPPC8Q9Y2L5 1435 aa17.21■□□□□ 0.35
PKD1-202ENST00000415938 MAPK8IP3Q9UPT6 1336 aa17.21■□□□□ 0.34
PKD1-202ENST00000415938 RRAGDQ9NQL2 400 aaPredicted RBP17.2■□□□□ 0.34
PKD1-202ENST00000415938 NKTRP30414 1462 aaKnown RBP17.2■□□□□ 0.34
PKD1-202ENST00000415938 CDC42BPBQ9Y5S2 1711 aa17.19■□□□□ 0.34
PKD1-202ENST00000415938 PREX2Q70Z35 1606 aa17.19■□□□□ 0.34
PKD1-202ENST00000415938 ABCC2Q92887 1545 aa17.19■□□□□ 0.34
PKD1-202ENST00000415938 L1TD1Q5T7N2 865 aaKnown RBP17.19■□□□□ 0.34
PKD1-202ENST00000415938 PANK2Q9BZ23 570 aa17.19■□□□□ 0.34
PKD1-202ENST00000415938 USP19O94966 1318 aa17.19■□□□□ 0.34
PKD1-202ENST00000415938 ZNF521Q96K83 1311 aa17.19■□□□□ 0.34
PKD1-202ENST00000415938 PDZRN3Q9UPQ7 1066 aa17.19■□□□□ 0.34
PKD1-202ENST00000415938 GOLGA6L3A6NEY3 463 aa17.18■□□□□ 0.34
PKD1-202ENST00000415938 TMEM132EQ6IEE7 984 aa17.18■□□□□ 0.34
PKD1-202ENST00000415938 FTSJ3Q8IY81 847 aaKnown RBP17.18■□□□□ 0.34
PKD1-202ENST00000415938 TRPM1Q7Z4N2 1603 aa17.17■□□□□ 0.34
PKD1-202ENST00000415938 TBC1D2Q9BYX2 928 aa17.17■□□□□ 0.34
PKD1-202ENST00000415938 PLCH2O75038 1416 aa17.17■□□□□ 0.34
PKD1-202ENST00000415938 UBE2Q2Q8WVN8 375 aa17.17■□□□□ 0.34
PKD1-202ENST00000415938 PLA2R1Q13018 1463 aa17.17■□□□□ 0.34
PKD1-202ENST00000415938 STK26Q9P289 416 aa17.17■□□□□ 0.34
PKD1-202ENST00000415938 PCDHB15Q9Y5E8 787 aa17.17■□□□□ 0.34
PKD1-202ENST00000415938 RLBP1P12271 317 aa17.16■□□□□ 0.34
PKD1-202ENST00000415938 MORC1Q86VD1 984 aa17.16■□□□□ 0.34
PKD1-202ENST00000415938 WWC1Q8IX03 1113 aa17.16■□□□□ 0.34
PKD1-202ENST00000415938 EIF3AQ14152 1382 aaKnown RBP17.16■□□□□ 0.34
PKD1-202ENST00000415938 GPRASP1Q5JY77 1395 aa17.16■□□□□ 0.34
PKD1-202ENST00000415938 CFAP70Q5T0N1 1121 aa17.15■□□□□ 0.34
PKD1-202ENST00000415938 KANK1Q14678 1352 aa17.15■□□□□ 0.34
PKD1-202ENST00000415938 PNNQ9H307 717 aaKnown RBP17.15■□□□□ 0.34
PKD1-202ENST00000415938 FOXD4L1Q9NU39 408 aa17.14■□□□□ 0.33
PKD1-202ENST00000415938 PDE3AQ14432 1141 aa17.14■□□□□ 0.33
PKD1-202ENST00000415938 PMFBP1Q8TBY8 1022 aa17.14■□□□□ 0.33
PKD1-202ENST00000415938 TRAK1Q9UPV9 953 aa17.13■□□□□ 0.33
PKD1-202ENST00000415938 HSP90AA1P07900 732 aaKnown RBP17.12■□□□□ 0.33
PKD1-202ENST00000415938 TCP11L2Q8N4U5 519 aa17.12■□□□□ 0.33
PKD1-202ENST00000415938 DUOX2Q9NRD8 1548 aa17.12■□□□□ 0.33
PKD1-202ENST00000415938 WDR7Q9Y4E6 1490 aa17.11■□□□□ 0.33
PKD1-202ENST00000415938 RWDD1Q9H446 243 aaPredicted RBP17.11■□□□□ 0.33
PKD1-202ENST00000415938 XRCC6P12956 609 aaKnown RBP eCLIP17.11■□□□□ 0.33
PKD1-202ENST00000415938 CFAP65Q6ZU64 1925 aaKnown RBP17.09■□□□□ 0.33
PKD1-202ENST00000415938 RARSP54136 660 aaKnown RBP17.09■□□□□ 0.33
PKD1-202ENST00000415938 ITPRIPQ8IWB1 547 aa17.09■□□□□ 0.33
PKD1-202ENST00000415938 MYO5CQ9NQX4 1742 aa17.09■□□□□ 0.33
PKD1-202ENST00000415938 PRDM15P57071 1507 aaPredicted RBP17.09■□□□□ 0.33
PKD1-202ENST00000415938 U2AF1L5P0DN76 240 aaPredicted RBP17.09■□□□□ 0.33
PKD1-202ENST00000415938 U2AF1Q01081 240 aaKnown RBP eCLIP17.09■□□□□ 0.33
PKD1-202ENST00000415938 TBC1D32Q96NH3 1257 aa17.09■□□□□ 0.33
PKD1-202ENST00000415938 CARD14Q9BXL6 1004 aa17.09■□□□□ 0.33
PKD1-202ENST00000415938 MCM4P33991 863 aa17.08■□□□□ 0.33
PKD1-202ENST00000415938 TSR2Q969E8 191 aaKnown RBP17.08■□□□□ 0.33
PKD1-202ENST00000415938 C22orf23Q9BZE7 217 aa17.08■□□□□ 0.33
PKD1-202ENST00000415938 TRMT2AQ8IZ69 625 aaKnown RBP17.08■□□□□ 0.32
PKD1-202ENST00000415938 U2SURPO15042 1029 aaKnown RBP17.08■□□□□ 0.32
PKD1-202ENST00000415938 HSCBQ8IWL3 235 aa17.08■□□□□ 0.32
PKD1-202ENST00000415938 ASXL1Q8IXJ9 1541 aa17.07■□□□□ 0.32
PKD1-202ENST00000415938 TRAK2O60296 914 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms