RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 LTBP4Q8N2S1 1624 aa37.45■■■■□ 3.59
CPNE1-207ENST00000414664 ZFYVE9O95405 1425 aa37.44■■■■□ 3.58
CPNE1-207ENST00000414664 CLTCL1P53675 1640 aa37.44■■■■□ 3.58
CPNE1-207ENST00000414664 PPP1R15AO75807 674 aaPredicted RBP37.44■■■■□ 3.58
CPNE1-207ENST00000414664 ZNF326Q5BKZ1 582 aaKnown RBP37.39■■■■□ 3.58
CPNE1-207ENST00000414664 KIF1BO60333 1816 aa37.38■■■■□ 3.58
CPNE1-207ENST00000414664 BCANQ96GW7 911 aa37.38■■■■□ 3.57
CPNE1-207ENST00000414664 PLEKHG1Q9ULL1 1385 aa37.35■■■■□ 3.57
CPNE1-207ENST00000414664 CCDC144AA2RUR9 1427 aa37.33■■■■□ 3.57
CPNE1-207ENST00000414664 CPS1P31327 1500 aa37.31■■■■□ 3.56
CPNE1-207ENST00000414664 FBXO41Q8TF61 875 aa37.31■■■■□ 3.56
CPNE1-207ENST00000414664 NUTM2DQ5VT03 806 aaPredicted RBP37.3■■■■□ 3.56
CPNE1-207ENST00000414664 SLC26A8Q96RN1 970 aa37.3■■■■□ 3.56
CPNE1-207ENST00000414664 IQSEC2Q5JU85 1478 aa37.29■■■■□ 3.56
CPNE1-207ENST00000414664 TRIM26Q12899 539 aaPredicted RBP37.25■■■■□ 3.55
CPNE1-207ENST00000414664 RPGRIP1LQ68CZ1 1315 aa37.24■■■■□ 3.55
CPNE1-207ENST00000414664 ILDR1Q86SU0 546 aaPredicted RBP37.22■■■■□ 3.55
CPNE1-207ENST00000414664 SENP3Q9H4L4 574 aaPredicted RBP37.22■■■■□ 3.55
CPNE1-207ENST00000414664 TBX22Q9Y458 520 aa37.21■■■■□ 3.55
CPNE1-207ENST00000414664 NEXMIFQ5QGS0 1516 aa37.19■■■■□ 3.54
CPNE1-207ENST00000414664 VGFO15240 615 aaPredicted RBP37.17■■■■□ 3.54
CPNE1-207ENST00000414664 KCNA6P17658 529 aa37.17■■■■□ 3.54
CPNE1-207ENST00000414664 STRCP1A6NGW2 1772 aa37.15■■■■□ 3.54
CPNE1-207ENST00000414664 DIP2AQ14689 1571 aa37.14■■■■□ 3.54
CPNE1-207ENST00000414664 ADAMTS13Q76LX8 1427 aa37.13■■■■□ 3.53
CPNE1-207ENST00000414664 ANKRD30BQ9BXX2 1392 aa37.13■■■■□ 3.53
CPNE1-207ENST00000414664 RGL3Q3MIN7 710 aa37.12■■■■□ 3.53
CPNE1-207ENST00000414664 SPATA31E1Q6ZUB1 1445 aa37.11■■■■□ 3.53
CPNE1-207ENST00000414664 LRRC7Q96NW7 1537 aa37.09■■■■□ 3.53
CPNE1-207ENST00000414664 SETBP1Q9Y6X0 1596 aa37.08■■■■□ 3.53
CPNE1-207ENST00000414664 PIK3R4Q99570 1358 aa37.08■■■■□ 3.53
CPNE1-207ENST00000414664 PPLO60437 1756 aa37.06■■■■□ 3.52
CPNE1-207ENST00000414664 NWD1Q149M9 1564 aa37.04■■■■□ 3.52
CPNE1-207ENST00000414664 CHD2O14647 1828 aaKnown RBP37.03■■■■□ 3.52
CPNE1-207ENST00000414664 NRXN3Q9Y4C0 1643 aa37.03■■■■□ 3.52
CPNE1-207ENST00000414664 UBAP1LF5GYI3 381 aa37.02■■■■□ 3.52
CPNE1-207ENST00000414664 NKTRP30414 1462 aaKnown RBP37.01■■■■□ 3.52
CPNE1-207ENST00000414664 PROSER2Q86WR7 435 aaPredicted RBP37.01■■■■□ 3.52
CPNE1-207ENST00000414664 TOM1O60784 492 aa36.97■■■■□ 3.51
CPNE1-207ENST00000414664 TMEM94Q12767 1356 aa36.94■■■■□ 3.5
CPNE1-207ENST00000414664 AMOTL2Q9Y2J4 779 aa36.94■■■■□ 3.5
CPNE1-207ENST00000414664 IFT172Q9UG01 1749 aa36.93■■■■□ 3.5
CPNE1-207ENST00000414664 ADGRF5Q8IZF2 1346 aa36.92■■■■□ 3.5
CPNE1-207ENST00000414664 METP08581 1390 aa36.91■■■■□ 3.5
CPNE1-207ENST00000414664 PTPRUQ92729 1446 aa36.88■■■■□ 3.49
CPNE1-207ENST00000414664 ALKQ9UM73 1620 aa36.88■■■■□ 3.49
CPNE1-207ENST00000414664 XIRP1Q702N8 1843 aaKnown RBP36.87■■■■□ 3.49
CPNE1-207ENST00000414664 RBM33Q96EV2 1170 aaKnown RBP36.84■■■■□ 3.49
CPNE1-207ENST00000414664 NCOA3Q9Y6Q9 1424 aa36.84■■■■□ 3.49
CPNE1-207ENST00000414664 MYOM2P54296 1465 aa36.82■■■■□ 3.49
CPNE1-207ENST00000414664 STAC3Q96MF2 364 aa36.82■■■■□ 3.48
CPNE1-207ENST00000414664 SETD1AO15047 1707 aaKnown RBP36.8■■■■□ 3.48
CPNE1-207ENST00000414664 XRN1Q8IZH2 1706 aaKnown RBP36.8■■■■□ 3.48
CPNE1-207ENST00000414664 PIK3C2GO75747 1445 aa36.8■■■■□ 3.48
CPNE1-207ENST00000414664 MSH6P52701 1360 aa36.79■■■■□ 3.48
CPNE1-207ENST00000414664 PIP4K2BP78356 416 aa36.78■■■■□ 3.48
CPNE1-207ENST00000414664 C14orf37Q86TY3 774 aa36.78■■■■□ 3.48
CPNE1-207ENST00000414664 SCAF1Q9H7N4 1312 aaKnown RBP36.78■■■■□ 3.48
CPNE1-207ENST00000414664 DCAF11Q8TEB1 546 aa36.77■■■■□ 3.48
CPNE1-207ENST00000414664 NRXN1Q9ULB1 1477 aa36.76■■■■□ 3.48
CPNE1-207ENST00000414664 DHX57Q6P158 1386 aaKnown RBP36.76■■■■□ 3.47
CPNE1-207ENST00000414664 KDM2AQ9Y2K7 1162 aa36.74■■■■□ 3.47
CPNE1-207ENST00000414664 C14orf93Q9H972 538 aaKnown RBP36.72■■■■□ 3.47
CPNE1-207ENST00000414664 C19orf44Q9H6X5 657 aa36.7■■■■□ 3.47
CPNE1-207ENST00000414664 PTCH1Q13635 1447 aa36.68■■■■□ 3.46
CPNE1-207ENST00000414664 PRAG1Q86YV5 1406 aa36.67■■■■□ 3.46
CPNE1-207ENST00000414664 LAMC1P11047 1609 aa36.67■■■■□ 3.46
CPNE1-207ENST00000414664 CFAP70Q5T0N1 1121 aa36.65■■■■□ 3.46
CPNE1-207ENST00000414664 TMEM132EQ6IEE7 984 aa36.64■■■■□ 3.46
CPNE1-207ENST00000414664 ATF3P18847 181 aa36.63■■■■□ 3.45
CPNE1-207ENST00000414664 CADPS2Q86UW7 1296 aa36.63■■■■□ 3.45
CPNE1-207ENST00000414664 LRPPRCP42704 1394 aaKnown RBP36.63■■■■□ 3.45
CPNE1-207ENST00000414664 SIN3AQ96ST3 1273 aa36.62■■■■□ 3.45
CPNE1-207ENST00000414664 PCGF6Q9BYE7 350 aa36.62■■■■□ 3.45
CPNE1-207ENST00000414664 STK26Q9P289 416 aa36.61■■■■□ 3.45
CPNE1-207ENST00000414664 ROBO2Q9HCK4 1378 aa36.61■■■■□ 3.45
CPNE1-207ENST00000414664 ABCC11Q96J66 1382 aa36.59■■■■□ 3.45
CPNE1-207ENST00000414664 NEUROD1Q13562 356 aa36.59■■■■□ 3.45
CPNE1-207ENST00000414664 SLAIN2Q9P270 581 aa36.59■■■■□ 3.45
CPNE1-207ENST00000414664 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.59■■■■□ 3.45
CPNE1-207ENST00000414664 ASXL1Q8IXJ9 1541 aa36.58■■■■□ 3.45
CPNE1-207ENST00000414664 TECPR2O15040 1411 aa36.57■■■■□ 3.44
CPNE1-207ENST00000414664 FAM135BQ49AJ0 1406 aa36.57■■■■□ 3.44
CPNE1-207ENST00000414664 YTHDC2Q9H6S0 1430 aaKnown RBP36.57■■■■□ 3.44
CPNE1-207ENST00000414664 DCCP43146 1447 aa36.56■■■■□ 3.44
CPNE1-207ENST00000414664 ADGRL3Q9HAR2 1447 aa36.55■■■■□ 3.44
CPNE1-207ENST00000414664 HSPA1LP34931 641 aa36.52■■■■□ 3.44
CPNE1-207ENST00000414664 KNDC1Q76NI1 1749 aa36.51■■■■□ 3.44
CPNE1-207ENST00000414664 SIRT1Q96EB6 747 aa36.51■■■■□ 3.44
CPNE1-207ENST00000414664 L3MBTL2Q969R5 705 aa36.5■■■■□ 3.43
CPNE1-207ENST00000414664 NALCNQ8IZF0 1738 aa36.47■■■■□ 3.43
CPNE1-207ENST00000414664 WAPLQ7Z5K2 1190 aa36.46■■■■□ 3.43
CPNE1-207ENST00000414664 ROBO1Q9Y6N7 1651 aa36.45■■■■□ 3.42
CPNE1-207ENST00000414664 ADGRB1O14514 1584 aa36.44■■■■□ 3.42
CPNE1-207ENST00000414664 KIAA1210Q9ULL0 1709 aa36.39■■■■□ 3.42
CPNE1-207ENST00000414664 DLC1Q96QB1 1528 aa36.39■■■■□ 3.42
CPNE1-207ENST00000414664 MST1RQ04912 1400 aa36.38■■■■□ 3.41
CPNE1-207ENST00000414664 TRAK1Q9UPV9 953 aa36.37■■■■□ 3.41
CPNE1-207ENST00000414664 PLEKHH1Q9ULM0 1364 aa36.37■■■■□ 3.41
CPNE1-207ENST00000414664 PRAM1Q96QH2 718 aa36.36■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms