RNA–Protein interactions for RNA: ENST00000413755.5

SNHG17-201, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-201ENST00000413755 ZFYVE9O95405 1425 aa22.16■■□□□ 1.14
SNHG17-201ENST00000413755 BCANQ96GW7 911 aa22.16■■□□□ 1.14
SNHG17-201ENST00000413755 PLEKHG1Q9ULL1 1385 aa22.13■■□□□ 1.13
SNHG17-201ENST00000413755 NKTRP30414 1462 aaKnown RBP22.13■■□□□ 1.13
SNHG17-201ENST00000413755 RIMS2Q9UQ26 1411 aa22.13■■□□□ 1.13
SNHG17-201ENST00000413755 NWD1Q149M9 1564 aa22.12■■□□□ 1.13
SNHG17-201ENST00000413755 HDGFP51858 240 aaKnown RBP22.11■■□□□ 1.13
SNHG17-201ENST00000413755 ROCK1Q13464 1354 aa22.1■■□□□ 1.13
SNHG17-201ENST00000413755 PPP1R15AO75807 674 aaPredicted RBP22.09■■□□□ 1.13
SNHG17-201ENST00000413755 TBX22Q9Y458 520 aa22.09■■□□□ 1.13
SNHG17-201ENST00000413755 UNC13BO14795 1591 aa22.08■■□□□ 1.13
SNHG17-201ENST00000413755 CHGAP10645 457 aaKnown RBP22.08■■□□□ 1.13
SNHG17-201ENST00000413755 TMEM131LA2VDJ0 1609 aa22.08■■□□□ 1.13
SNHG17-201ENST00000413755 MSH6P52701 1360 aa22.08■■□□□ 1.12
SNHG17-201ENST00000413755 SLAIN2Q9P270 581 aa22.07■■□□□ 1.12
SNHG17-201ENST00000413755 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.06■■□□□ 1.12
SNHG17-201ENST00000413755 ROBO1Q9Y6N7 1651 aa22.06■■□□□ 1.12
SNHG17-201ENST00000413755 NUTM2DQ5VT03 806 aaPredicted RBP22.05■■□□□ 1.12
SNHG17-201ENST00000413755 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
SNHG17-201ENST00000413755 ADAMTS13Q76LX8 1427 aa22.04■■□□□ 1.12
SNHG17-201ENST00000413755 NUP155O75694 1391 aa22.02■■□□□ 1.12
SNHG17-201ENST00000413755 E9PCH4 1651 aa22.02■■□□□ 1.12
SNHG17-201ENST00000413755 MYO5BQ9ULV0 1848 aa22.01■■□□□ 1.11
SNHG17-201ENST00000413755 ITGAEP38570 1179 aa22.01■■□□□ 1.11
SNHG17-201ENST00000413755 POTEAQ6S8J7 498 aa22.01■■□□□ 1.11
SNHG17-201ENST00000413755 NCOA3Q9Y6Q9 1424 aa22■■□□□ 1.11
SNHG17-201ENST00000413755 CHD2O14647 1828 aaKnown RBP22■■□□□ 1.11
SNHG17-201ENST00000413755 IQGAP3Q86VI3 1631 aa21.99■■□□□ 1.11
SNHG17-201ENST00000413755 PPARGC1BQ86YN6 1023 aaKnown RBP21.98■■□□□ 1.11
SNHG17-201ENST00000413755 PIK3R4Q99570 1358 aa21.97■■□□□ 1.11
SNHG17-201ENST00000413755 C19orf44Q9H6X5 657 aa21.94■■□□□ 1.1
SNHG17-201ENST00000413755 AMOTL2Q9Y2J4 779 aa21.94■■□□□ 1.1
SNHG17-201ENST00000413755 JCADQ9P266 1359 aa21.94■■□□□ 1.1
SNHG17-201ENST00000413755 PTPRUQ92729 1446 aa21.94■■□□□ 1.1
SNHG17-201ENST00000413755 C14orf37Q86TY3 774 aa21.93■■□□□ 1.1
SNHG17-201ENST00000413755 DIP2AQ14689 1571 aa21.92■■□□□ 1.1
SNHG17-201ENST00000413755 CADPS2Q86UW7 1296 aa21.92■■□□□ 1.1
SNHG17-201ENST00000413755 PHLPP1O60346 1717 aa21.9■■□□□ 1.1
SNHG17-201ENST00000413755 ATF3P18847 181 aa21.89■■□□□ 1.09
SNHG17-201ENST00000413755 COL16A1Q07092 1604 aaPredicted RBP21.88■■□□□ 1.09
SNHG17-201ENST00000413755 TRPM2O94759 1503 aa21.88■■□□□ 1.09
SNHG17-201ENST00000413755 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.86■■□□□ 1.09
SNHG17-201ENST00000413755 SPATA31A6Q5VVP1 1343 aa21.84■■□□□ 1.09
SNHG17-201ENST00000413755 ZNF326Q5BKZ1 582 aaKnown RBP21.84■■□□□ 1.09
SNHG17-201ENST00000413755 BRINP3Q76B58 766 aa21.84■■□□□ 1.09
SNHG17-201ENST00000413755 LRP6O75581 1613 aa21.84■■□□□ 1.09
SNHG17-201ENST00000413755 NRXN3Q9Y4C0 1643 aa21.84■■□□□ 1.09
SNHG17-201ENST00000413755 METP08581 1390 aa21.83■■□□□ 1.08
SNHG17-201ENST00000413755 SETBP1Q9Y6X0 1596 aa21.82■■□□□ 1.08
SNHG17-201ENST00000413755 AHDC1Q5TGY3 1603 aaPredicted RBP21.82■■□□□ 1.08
SNHG17-201ENST00000413755 DCCP43146 1447 aa21.8■■□□□ 1.08
SNHG17-201ENST00000413755 RRBP1Q9P2E9 1410 aaKnown RBP21.8■■□□□ 1.08
SNHG17-201ENST00000413755 SPHKAPQ2M3C7 1700 aa21.79■■□□□ 1.08
SNHG17-201ENST00000413755 XRN1Q8IZH2 1706 aaKnown RBP21.78■■□□□ 1.08
SNHG17-201ENST00000413755 NAIPQ13075 1403 aa21.78■■□□□ 1.08
SNHG17-201ENST00000413755 MST1RQ04912 1400 aa21.76■■□□□ 1.07
SNHG17-201ENST00000413755 MEX3CQ5U5Q3 659 aaKnown RBP21.76■■□□□ 1.07
SNHG17-201ENST00000413755 NEXMIFQ5QGS0 1516 aa21.75■■□□□ 1.07
SNHG17-201ENST00000413755 CLTCL1P53675 1640 aa21.75■■□□□ 1.07
SNHG17-201ENST00000413755 ZNF772Q68DY9 489 aaPredicted RBP21.74■■□□□ 1.07
SNHG17-201ENST00000413755 ASXL1Q8IXJ9 1541 aa21.73■■□□□ 1.07
SNHG17-201ENST00000413755 SHPRHQ149N8 1683 aa21.72■■□□□ 1.07
SNHG17-201ENST00000413755 SETD5Q9C0A6 1442 aa21.72■■□□□ 1.07
SNHG17-201ENST00000413755 ADGRL3Q9HAR2 1447 aa21.71■■□□□ 1.07
SNHG17-201ENST00000413755 NUTM2BA6NNL0 878 aaPredicted RBP21.7■■□□□ 1.06
SNHG17-201ENST00000413755 NUTM2EB1AL46 878 aaPredicted RBP21.7■■□□□ 1.06
SNHG17-201ENST00000413755 NUTM2AQ8IVF1 878 aaPredicted RBP21.7■■□□□ 1.06
SNHG17-201ENST00000413755 DDX17Q92841 729 aaKnown RBP21.7■■□□□ 1.06
SNHG17-201ENST00000413755 TRIM52Q96A61 297 aa21.68■■□□□ 1.06
SNHG17-201ENST00000413755 LRRC59Q96AG4 307 aaKnown RBP21.68■■□□□ 1.06
SNHG17-201ENST00000413755 SETD1AO15047 1707 aaKnown RBP21.68■■□□□ 1.06
SNHG17-201ENST00000413755 VGFO15240 615 aaPredicted RBP21.67■■□□□ 1.06
SNHG17-201ENST00000413755 HFM1A2PYH4 1435 aa21.66■■□□□ 1.06
SNHG17-201ENST00000413755 ROBO2Q9HCK4 1378 aa21.64■■□□□ 1.06
SNHG17-201ENST00000413755 RXRBP28702 533 aa21.64■■□□□ 1.05
SNHG17-201ENST00000413755 SLC4A1APQ9BWU0 796 aaKnown RBP21.64■■□□□ 1.05
SNHG17-201ENST00000413755 NHSL1Q5SYE7 1610 aa21.64■■□□□ 1.05
SNHG17-201ENST00000413755 RPGRIP1LQ68CZ1 1315 aa21.63■■□□□ 1.05
SNHG17-201ENST00000413755 UPF1Q92900 1129 aaKnown RBP eCLIP21.63■■□□□ 1.057e-6■■■■□ 24.4
SNHG17-201ENST00000413755 C1orf167Q5SNV9 1468 aa21.63■■□□□ 1.05
SNHG17-201ENST00000413755 PTCH1Q13635 1447 aa21.63■■□□□ 1.05
SNHG17-201ENST00000413755 PNPLA6Q8IY17 1366 aa21.62■■□□□ 1.05
SNHG17-201ENST00000413755 AFF2P51816 1311 aa21.62■■□□□ 1.05
SNHG17-201ENST00000413755 NALCNQ8IZF0 1738 aa21.61■■□□□ 1.05
SNHG17-201ENST00000413755 KIF1BO60333 1816 aa21.6■■□□□ 1.05
SNHG17-201ENST00000413755 ORAI2Q96SN7 254 aa21.6■■□□□ 1.05
SNHG17-201ENST00000413755 PRAG1Q86YV5 1406 aa21.59■■□□□ 1.05
SNHG17-201ENST00000413755 FOXD1Q16676 465 aa21.58■■□□□ 1.05
SNHG17-201ENST00000413755 C8orf37Q96NL8 207 aa21.58■■□□□ 1.05
SNHG17-201ENST00000413755 SOS2Q07890 1332 aaPredicted RBP21.57■■□□□ 1.04
SNHG17-201ENST00000413755 CDK12Q9NYV4 1490 aaPredicted RBP21.56■■□□□ 1.04
SNHG17-201ENST00000413755 QTRT2Q9H974 415 aaKnown RBP21.54■■□□□ 1.04
SNHG17-201ENST00000413755 ADGRF5Q8IZF2 1346 aa21.53■■□□□ 1.04
SNHG17-201ENST00000413755 LAMC1P11047 1609 aa21.52■■□□□ 1.04
SNHG17-201ENST00000413755 ADAMTS2O95450 1211 aa21.52■■□□□ 1.04
SNHG17-201ENST00000413755 RBM6P78332 1123 aaKnown RBP21.51■■□□□ 1.03
SNHG17-201ENST00000413755 NGLY1Q96IV0 654 aa21.5■■□□□ 1.03
SNHG17-201ENST00000413755 PPLO60437 1756 aa21.49■■□□□ 1.03
SNHG17-201ENST00000413755 RGL3Q3MIN7 710 aa21.49■■□□□ 1.03
SNHG17-201ENST00000413755 RGS12O14924 1447 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms