RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 SLC26A8Q96RN1 970 aa19.59■□□□□ 0.73
SSB-203ENST00000413002 RIMS2Q9UQ26 1411 aa19.59■□□□□ 0.73
SSB-203ENST00000413002 RAB3GAP2Q9H2M9 1393 aa19.58■□□□□ 0.73
SSB-203ENST00000413002 PPP1R15AO75807 674 aaPredicted RBP19.58■□□□□ 0.72
SSB-203ENST00000413002 MPHOSPH9Q99550 1183 aa19.58■□□□□ 0.72
SSB-203ENST00000413002 KDM5AP29375 1690 aaKnown RBP19.58■□□□□ 0.72
SSB-203ENST00000413002 MYO5BQ9ULV0 1848 aa19.58■□□□□ 0.72
SSB-203ENST00000413002 SPHKAPQ2M3C7 1700 aa19.56■□□□□ 0.72
SSB-203ENST00000413002 ZNF326Q5BKZ1 582 aaKnown RBP19.56■□□□□ 0.72
SSB-203ENST00000413002 ZFYVE9O95405 1425 aa19.56■□□□□ 0.72
SSB-203ENST00000413002 TRPM2O94759 1503 aa19.53■□□□□ 0.72
SSB-203ENST00000413002 CLTCL1P53675 1640 aa19.53■□□□□ 0.72
SSB-203ENST00000413002 HDGFP51858 240 aaKnown RBP19.52■□□□□ 0.72
SSB-203ENST00000413002 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.51■□□□□ 0.71
SSB-203ENST00000413002 PLEKHG1Q9ULL1 1385 aa19.49■□□□□ 0.71
SSB-203ENST00000413002 STRCP1A6NGW2 1772 aa19.48■□□□□ 0.71
SSB-203ENST00000413002 CPS1P31327 1500 aa19.47■□□□□ 0.71
SSB-203ENST00000413002 UBAP1LF5GYI3 381 aa19.47■□□□□ 0.71
SSB-203ENST00000413002 RBM33Q96EV2 1170 aaKnown RBP19.47■□□□□ 0.71
SSB-203ENST00000413002 IQSEC2Q5JU85 1478 aa19.44■□□□□ 0.7
SSB-203ENST00000413002 KCNA6P17658 529 aa19.44■□□□□ 0.7
SSB-203ENST00000413002 RGL3Q3MIN7 710 aa19.44■□□□□ 0.7
SSB-203ENST00000413002 LRRC7Q96NW7 1537 aa19.44■□□□□ 0.7
SSB-203ENST00000413002 CCDC144AA2RUR9 1427 aa19.42■□□□□ 0.7
SSB-203ENST00000413002 ADAMTS13Q76LX8 1427 aa19.42■□□□□ 0.7
SSB-203ENST00000413002 TBX22Q9Y458 520 aa19.42■□□□□ 0.7
SSB-203ENST00000413002 ACIN1Q9UKV3 1341 aaKnown RBP19.42■□□□□ 0.7
SSB-203ENST00000413002 PIP4K2BP78356 416 aa19.4■□□□□ 0.7
SSB-203ENST00000413002 PROSER2Q86WR7 435 aaPredicted RBP19.4■□□□□ 0.7
SSB-203ENST00000413002 SCAF1Q9H7N4 1312 aaKnown RBP19.4■□□□□ 0.7
SSB-203ENST00000413002 NEXMIFQ5QGS0 1516 aa19.4■□□□□ 0.7
SSB-203ENST00000413002 KIF1BO60333 1816 aa19.39■□□□□ 0.7
SSB-203ENST00000413002 HRCP23327 699 aa19.39■□□□□ 0.69
SSB-203ENST00000413002 TMEM94Q12767 1356 aa19.37■□□□□ 0.69
SSB-203ENST00000413002 VGFO15240 615 aaPredicted RBP19.35■□□□□ 0.69
SSB-203ENST00000413002 TOM1O60784 492 aa19.35■□□□□ 0.69
SSB-203ENST00000413002 SPATA31E1Q6ZUB1 1445 aa19.34■□□□□ 0.69
SSB-203ENST00000413002 METP08581 1390 aa19.34■□□□□ 0.69
SSB-203ENST00000413002 RPGRIP1LQ68CZ1 1315 aa19.34■□□□□ 0.69
SSB-203ENST00000413002 AMOTL2Q9Y2J4 779 aa19.34■□□□□ 0.69
SSB-203ENST00000413002 PTPRUQ92729 1446 aa19.34■□□□□ 0.69
SSB-203ENST00000413002 NRXN3Q9Y4C0 1643 aa19.33■□□□□ 0.69
SSB-203ENST00000413002 ANKRD30BQ9BXX2 1392 aa19.32■□□□□ 0.68
SSB-203ENST00000413002 ADGRF5Q8IZF2 1346 aa19.32■□□□□ 0.68
SSB-203ENST00000413002 NWD1Q149M9 1564 aa19.32■□□□□ 0.68
SSB-203ENST00000413002 SETBP1Q9Y6X0 1596 aa19.32■□□□□ 0.68
SSB-203ENST00000413002 ALKQ9UM73 1620 aa19.3■□□□□ 0.68
SSB-203ENST00000413002 DIP2AQ14689 1571 aa19.3■□□□□ 0.68
SSB-203ENST00000413002 CHD2O14647 1828 aaKnown RBP19.3■□□□□ 0.68
SSB-203ENST00000413002 NKTRP30414 1462 aaKnown RBP19.29■□□□□ 0.68
SSB-203ENST00000413002 XIRP1Q702N8 1843 aaKnown RBP19.29■□□□□ 0.68
SSB-203ENST00000413002 PIK3R4Q99570 1358 aa19.29■□□□□ 0.68
SSB-203ENST00000413002 C14orf37Q86TY3 774 aa19.28■□□□□ 0.68
SSB-203ENST00000413002 PPLO60437 1756 aa19.27■□□□□ 0.68
SSB-203ENST00000413002 TRIM26Q12899 539 aaPredicted RBP19.26■□□□□ 0.67
SSB-203ENST00000413002 HSPA1LP34931 641 aa19.25■□□□□ 0.67
SSB-203ENST00000413002 MSH6P52701 1360 aa19.23■□□□□ 0.67
SSB-203ENST00000413002 KDM2AQ9Y2K7 1162 aa19.23■□□□□ 0.67
SSB-203ENST00000413002 TMEM132EQ6IEE7 984 aa19.22■□□□□ 0.67
SSB-203ENST00000413002 STK26Q9P289 416 aa19.2■□□□□ 0.66
SSB-203ENST00000413002 XRN1Q8IZH2 1706 aaKnown RBP19.2■□□□□ 0.66
SSB-203ENST00000413002 DCAF11Q8TEB1 546 aa19.19■□□□□ 0.66
SSB-203ENST00000413002 IFT172Q9UG01 1749 aa19.19■□□□□ 0.66
SSB-203ENST00000413002 SETD1AO15047 1707 aaKnown RBP19.18■□□□□ 0.66
SSB-203ENST00000413002 CFAP70Q5T0N1 1121 aa19.18■□□□□ 0.66
SSB-203ENST00000413002 C19orf44Q9H6X5 657 aa19.18■□□□□ 0.66
SSB-203ENST00000413002 SLAIN2Q9P270 581 aa19.18■□□□□ 0.66
SSB-203ENST00000413002 ROBO2Q9HCK4 1378 aa19.18■□□□□ 0.66
SSB-203ENST00000413002 PIK3C2GO75747 1445 aa19.17■□□□□ 0.66
SSB-203ENST00000413002 NCOA3Q9Y6Q9 1424 aa19.16■□□□□ 0.66
SSB-203ENST00000413002 ATF3P18847 181 aa19.15■□□□□ 0.66
SSB-203ENST00000413002 SIN3AQ96ST3 1273 aa19.15■□□□□ 0.66
SSB-203ENST00000413002 C14orf93Q9H972 538 aaKnown RBP19.15■□□□□ 0.66
SSB-203ENST00000413002 DHX57Q6P158 1386 aaKnown RBP19.15■□□□□ 0.66
SSB-203ENST00000413002 MYOM2P54296 1465 aa19.13■□□□□ 0.65
SSB-203ENST00000413002 ASXL1Q8IXJ9 1541 aa19.13■□□□□ 0.65
SSB-203ENST00000413002 NRXN1Q9ULB1 1477 aa19.12■□□□□ 0.65
SSB-203ENST00000413002 FAM135BQ49AJ0 1406 aa19.12■□□□□ 0.65
SSB-203ENST00000413002 NEUROD1Q13562 356 aa19.12■□□□□ 0.65
SSB-203ENST00000413002 WAPLQ7Z5K2 1190 aa19.12■□□□□ 0.65
SSB-203ENST00000413002 CADPS2Q86UW7 1296 aa19.12■□□□□ 0.65
SSB-203ENST00000413002 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.11■□□□□ 0.65
SSB-203ENST00000413002 PTCH1Q13635 1447 aa19.1■□□□□ 0.65
SSB-203ENST00000413002 LRPPRCP42704 1394 aaKnown RBP19.09■□□□□ 0.65
SSB-203ENST00000413002 ADGRL3Q9HAR2 1447 aa19.08■□□□□ 0.65
SSB-203ENST00000413002 PLEKHH1Q9ULM0 1364 aa19.08■□□□□ 0.65
SSB-203ENST00000413002 ROBO1Q9Y6N7 1651 aa19.08■□□□□ 0.65
SSB-203ENST00000413002 YTHDC2Q9H6S0 1430 aaKnown RBP19.08■□□□□ 0.64
SSB-203ENST00000413002 ABCC11Q96J66 1382 aa19.06■□□□□ 0.64
SSB-203ENST00000413002 NALCNQ8IZF0 1738 aa19.05■□□□□ 0.64
SSB-203ENST00000413002 SAFB2Q14151 953 aaKnown RBP eCLIP19.05■□□□□ 0.64
SSB-203ENST00000413002 BRINP3Q76B58 766 aa19.05■□□□□ 0.64
SSB-203ENST00000413002 PRAG1Q86YV5 1406 aa19.05■□□□□ 0.64
SSB-203ENST00000413002 DCCP43146 1447 aa19.04■□□□□ 0.64
SSB-203ENST00000413002 MST1RQ04912 1400 aa19.04■□□□□ 0.64
SSB-203ENST00000413002 L3MBTL2Q969R5 705 aa19.04■□□□□ 0.64
SSB-203ENST00000413002 PCGF6Q9BYE7 350 aa19.04■□□□□ 0.64
SSB-203ENST00000413002 TECPR2O15040 1411 aa19.03■□□□□ 0.64
SSB-203ENST00000413002 TRAK1Q9UPV9 953 aa19.03■□□□□ 0.64
SSB-203ENST00000413002 DISP3Q9P2K9 1392 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms