RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 PPP1R15AO75807 674 aaPredicted RBP28.68■■■□□ 2.18
ITGA6-204ENST00000412899 FAM135BQ49AJ0 1406 aa28.68■■■□□ 2.18
ITGA6-204ENST00000412899 CHGAP10645 457 aaKnown RBP28.65■■■□□ 2.18
ITGA6-204ENST00000412899 NKTRP30414 1462 aaKnown RBP28.65■■■□□ 2.18
ITGA6-204ENST00000412899 UNC13BO14795 1591 aa28.64■■■□□ 2.18
ITGA6-204ENST00000412899 RIMS2Q9UQ26 1411 aa28.64■■■□□ 2.18
ITGA6-204ENST00000412899 GCC2Q8IWJ2 1684 aa28.64■■■□□ 2.17
ITGA6-204ENST00000412899 PLEKHG1Q9ULL1 1385 aa28.63■■■□□ 2.17
ITGA6-204ENST00000412899 ZFYVE9O95405 1425 aa28.63■■■□□ 2.17
ITGA6-204ENST00000412899 NWD1Q149M9 1564 aa28.62■■■□□ 2.17
ITGA6-204ENST00000412899 ROCK1Q13464 1354 aa28.62■■■□□ 2.17
ITGA6-204ENST00000412899 MYO5BQ9ULV0 1848 aa28.61■■■□□ 2.17
ITGA6-204ENST00000412899 TMEM131LA2VDJ0 1609 aa28.6■■■□□ 2.17
ITGA6-204ENST00000412899 MSH6P52701 1360 aa28.6■■■□□ 2.17
ITGA6-204ENST00000412899 ITGAEP38570 1179 aa28.59■■■□□ 2.17
ITGA6-204ENST00000412899 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.59■■■□□ 2.17
ITGA6-204ENST00000412899 ROBO1Q9Y6N7 1651 aa28.57■■■□□ 2.16
ITGA6-204ENST00000412899 E9PCH4 1651 aa28.56■■■□□ 2.16
ITGA6-204ENST00000412899 TBX22Q9Y458 520 aa28.55■■■□□ 2.16
ITGA6-204ENST00000412899 NUP155O75694 1391 aa28.54■■■□□ 2.16
ITGA6-204ENST00000412899 NUTM2DQ5VT03 806 aaPredicted RBP28.54■■■□□ 2.16
ITGA6-204ENST00000412899 SLAIN2Q9P270 581 aa28.53■■■□□ 2.16
ITGA6-204ENST00000412899 IQGAP3Q86VI3 1631 aa28.53■■■□□ 2.16
ITGA6-204ENST00000412899 CHD2O14647 1828 aaKnown RBP28.53■■■□□ 2.16
ITGA6-204ENST00000412899 RGS17Q9UGC6 210 aaPredicted RBP28.52■■■□□ 2.16
ITGA6-204ENST00000412899 PPARGC1BQ86YN6 1023 aaKnown RBP28.51■■■□□ 2.15
ITGA6-204ENST00000412899 C14orf37Q86TY3 774 aa28.48■■■□□ 2.15
ITGA6-204ENST00000412899 ADAMTS13Q76LX8 1427 aa28.46■■■□□ 2.15
ITGA6-204ENST00000412899 NCOA3Q9Y6Q9 1424 aa28.44■■■□□ 2.14
ITGA6-204ENST00000412899 DIP2AQ14689 1571 aa28.43■■■□□ 2.14
ITGA6-204ENST00000412899 PIK3R4Q99570 1358 aa28.42■■■□□ 2.14
ITGA6-204ENST00000412899 PHLPP1O60346 1717 aa28.4■■■□□ 2.14
ITGA6-204ENST00000412899 JCADQ9P266 1359 aa28.38■■■□□ 2.13
ITGA6-204ENST00000412899 C19orf44Q9H6X5 657 aa28.38■■■□□ 2.13
ITGA6-204ENST00000412899 AMOTL2Q9Y2J4 779 aa28.38■■■□□ 2.13
ITGA6-204ENST00000412899 ATF3P18847 181 aa28.37■■■□□ 2.13
ITGA6-204ENST00000412899 POTEAQ6S8J7 498 aa28.37■■■□□ 2.13
ITGA6-204ENST00000412899 CADPS2Q86UW7 1296 aa28.37■■■□□ 2.13
ITGA6-204ENST00000412899 TRPM2O94759 1503 aa28.37■■■□□ 2.13
ITGA6-204ENST00000412899 ZNF326Q5BKZ1 582 aaKnown RBP28.35■■■□□ 2.13
ITGA6-204ENST00000412899 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.32■■■□□ 2.12
ITGA6-204ENST00000412899 SPHKAPQ2M3C7 1700 aa28.32■■■□□ 2.12
ITGA6-204ENST00000412899 PTPRUQ92729 1446 aa28.31■■■□□ 2.12
ITGA6-204ENST00000412899 COL16A1Q07092 1604 aaPredicted RBP28.29■■■□□ 2.12
ITGA6-204ENST00000412899 SETBP1Q9Y6X0 1596 aa28.25■■■□□ 2.11
ITGA6-204ENST00000412899 SPATA31A6Q5VVP1 1343 aa28.24■■■□□ 2.11
ITGA6-204ENST00000412899 NRXN3Q9Y4C0 1643 aa28.24■■■□□ 2.11
ITGA6-204ENST00000412899 AHDC1Q5TGY3 1603 aaPredicted RBP28.22■■■□□ 2.11
ITGA6-204ENST00000412899 MEX3CQ5U5Q3 659 aaKnown RBP28.22■■■□□ 2.11
ITGA6-204ENST00000412899 BRINP3Q76B58 766 aa28.22■■■□□ 2.11
ITGA6-204ENST00000412899 RRBP1Q9P2E9 1410 aaKnown RBP28.22■■■□□ 2.11
ITGA6-204ENST00000412899 METP08581 1390 aa28.21■■■□□ 2.11
ITGA6-204ENST00000412899 XRN1Q8IZH2 1706 aaKnown RBP28.21■■■□□ 2.11
ITGA6-204ENST00000412899 DCCP43146 1447 aa28.2■■■□□ 2.11
ITGA6-204ENST00000412899 NAIPQ13075 1403 aa28.19■■■□□ 2.1
ITGA6-204ENST00000412899 CLTCL1P53675 1640 aa28.19■■■□□ 2.1
ITGA6-204ENST00000412899 LRP6O75581 1613 aa28.18■■■□□ 2.1
ITGA6-204ENST00000412899 TRIM52Q96A61 297 aa28.17■■■□□ 2.1
ITGA6-204ENST00000412899 NEXMIFQ5QGS0 1516 aa28.16■■■□□ 2.1
ITGA6-204ENST00000412899 SHPRHQ149N8 1683 aa28.14■■■□□ 2.1
ITGA6-204ENST00000412899 ZNF772Q68DY9 489 aaPredicted RBP28.14■■■□□ 2.1
ITGA6-204ENST00000412899 KIF1BO60333 1816 aa28.13■■■□□ 2.09
ITGA6-204ENST00000412899 MST1RQ04912 1400 aa28.12■■■□□ 2.09
ITGA6-204ENST00000412899 ASXL1Q8IXJ9 1541 aa28.12■■■□□ 2.09
ITGA6-204ENST00000412899 NUTM2BA6NNL0 878 aaPredicted RBP28.11■■■□□ 2.09
ITGA6-204ENST00000412899 NUTM2EB1AL46 878 aaPredicted RBP28.11■■■□□ 2.09
ITGA6-204ENST00000412899 NUTM2AQ8IVF1 878 aaPredicted RBP28.11■■■□□ 2.09
ITGA6-204ENST00000412899 ADGRL3Q9HAR2 1447 aa28.09■■■□□ 2.09
ITGA6-204ENST00000412899 VGFO15240 615 aaPredicted RBP28.09■■■□□ 2.09
ITGA6-204ENST00000412899 SETD1AO15047 1707 aaKnown RBP28.07■■■□□ 2.08
ITGA6-204ENST00000412899 SLC4A1APQ9BWU0 796 aaKnown RBP28.07■■■□□ 2.08
ITGA6-204ENST00000412899 HFM1A2PYH4 1435 aa28.07■■■□□ 2.08
ITGA6-204ENST00000412899 LRRC59Q96AG4 307 aaKnown RBP28.06■■■□□ 2.08
ITGA6-204ENST00000412899 SETD5Q9C0A6 1442 aa28.05■■■□□ 2.08
ITGA6-204ENST00000412899 NHSL1Q5SYE7 1610 aa28.03■■■□□ 2.08
ITGA6-204ENST00000412899 RPGRIP1LQ68CZ1 1315 aa28.02■■■□□ 2.08
ITGA6-204ENST00000412899 NALCNQ8IZF0 1738 aa28.02■■■□□ 2.08
ITGA6-204ENST00000412899 DDX17Q92841 729 aaKnown RBP28.02■■■□□ 2.08
ITGA6-204ENST00000412899 RXRBP28702 533 aa27.99■■■□□ 2.07
ITGA6-204ENST00000412899 PTCH1Q13635 1447 aa27.99■■■□□ 2.07
ITGA6-204ENST00000412899 ROBO2Q9HCK4 1378 aa27.97■■■□□ 2.07
ITGA6-204ENST00000412899 C1orf167Q5SNV9 1468 aa27.96■■■□□ 2.07
ITGA6-204ENST00000412899 AFF2P51816 1311 aa27.96■■■□□ 2.07
ITGA6-204ENST00000412899 PNPLA6Q8IY17 1366 aa27.95■■■□□ 2.06
ITGA6-204ENST00000412899 FOXD1Q16676 465 aa27.93■■■□□ 2.06
ITGA6-204ENST00000412899 C8orf37Q96NL8 207 aa27.92■■■□□ 2.06
ITGA6-204ENST00000412899 ORAI2Q96SN7 254 aa27.92■■■□□ 2.06
ITGA6-204ENST00000412899 PPLO60437 1756 aa27.91■■■□□ 2.06
ITGA6-204ENST00000412899 UPF1Q92900 1129 aaKnown RBP eCLIP27.9■■■□□ 2.06
ITGA6-204ENST00000412899 PRAG1Q86YV5 1406 aa27.89■■■□□ 2.06
ITGA6-204ENST00000412899 CCDC144AA2RUR9 1427 aa27.87■■■□□ 2.05
ITGA6-204ENST00000412899 CDK12Q9NYV4 1490 aaPredicted RBP27.87■■■□□ 2.05
ITGA6-204ENST00000412899 ADAMTS2O95450 1211 aa27.86■■■□□ 2.05
ITGA6-204ENST00000412899 RGL3Q3MIN7 710 aa27.86■■■□□ 2.05
ITGA6-204ENST00000412899 SOS2Q07890 1332 aaPredicted RBP27.86■■■□□ 2.05
ITGA6-204ENST00000412899 QTRT2Q9H974 415 aaKnown RBP27.85■■■□□ 2.05
ITGA6-204ENST00000412899 NGLY1Q96IV0 654 aa27.84■■■□□ 2.05
ITGA6-204ENST00000412899 ADGRF5Q8IZF2 1346 aa27.84■■■□□ 2.05
ITGA6-204ENST00000412899 LAMC1P11047 1609 aa27.83■■■□□ 2.05
ITGA6-204ENST00000412899 MPHOSPH9Q99550 1183 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms