RNA–Protein interactions for RNA: ENST00000412777.6

LRTOMT-204, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4

Gene LRTOMT, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-204ENST00000412777 MPHOSPH9Q99550 1183 aa13.38□□□□□ -0.27
LRTOMT-204ENST00000412777 KIF1BO60333 1816 aa13.36□□□□□ -0.27
LRTOMT-204ENST00000412777 ILDR1Q86SU0 546 aaPredicted RBP13.36□□□□□ -0.27
LRTOMT-204ENST00000412777 FBXO41Q8TF61 875 aa13.36□□□□□ -0.27
LRTOMT-204ENST00000412777 IQSEC2Q5JU85 1478 aa13.36□□□□□ -0.27
LRTOMT-204ENST00000412777 CPS1P31327 1500 aa13.35□□□□□ -0.27
LRTOMT-204ENST00000412777 HRCP23327 699 aa13.35□□□□□ -0.27
LRTOMT-204ENST00000412777 HDGFP51858 240 aaKnown RBP13.35□□□□□ -0.27
LRTOMT-204ENST00000412777 FOXD1Q16676 465 aa13.35□□□□□ -0.27
LRTOMT-204ENST00000412777 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.35□□□□□ -0.27
LRTOMT-204ENST00000412777 STRCP1A6NGW2 1772 aa13.35□□□□□ -0.27
LRTOMT-204ENST00000412777 PLEKHG1Q9ULL1 1385 aa13.34□□□□□ -0.27
LRTOMT-204ENST00000412777 PPP1R15AO75807 674 aaPredicted RBP13.33□□□□□ -0.28
LRTOMT-204ENST00000412777 SLC26A8Q96RN1 970 aa13.31□□□□□ -0.28
LRTOMT-204ENST00000412777 NEXMIFQ5QGS0 1516 aa13.3□□□□□ -0.28
LRTOMT-204ENST00000412777 ZNF326Q5BKZ1 582 aaKnown RBP13.3□□□□□ -0.28
LRTOMT-204ENST00000412777 NUTM2DQ5VT03 806 aaPredicted RBP13.3□□□□□ -0.28
LRTOMT-204ENST00000412777 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
LRTOMT-204ENST00000412777 BCANQ96GW7 911 aa13.29□□□□□ -0.28
LRTOMT-204ENST00000412777 ADAMTS13Q76LX8 1427 aa13.29□□□□□ -0.28
LRTOMT-204ENST00000412777 TBX22Q9Y458 520 aa13.28□□□□□ -0.28
LRTOMT-204ENST00000412777 LRRC7Q96NW7 1537 aa13.28□□□□□ -0.28
LRTOMT-204ENST00000412777 DIP2AQ14689 1571 aa13.28□□□□□ -0.28
LRTOMT-204ENST00000412777 NWD1Q149M9 1564 aa13.28□□□□□ -0.28
LRTOMT-204ENST00000412777 KCNA6P17658 529 aa13.27□□□□□ -0.29
LRTOMT-204ENST00000412777 SPATA31E1Q6ZUB1 1445 aa13.27□□□□□ -0.29
LRTOMT-204ENST00000412777 SETBP1Q9Y6X0 1596 aa13.27□□□□□ -0.29
LRTOMT-204ENST00000412777 NRXN3Q9Y4C0 1643 aa13.27□□□□□ -0.29
LRTOMT-204ENST00000412777 CHD2O14647 1828 aaKnown RBP13.27□□□□□ -0.29
LRTOMT-204ENST00000412777 PPLO60437 1756 aa13.26□□□□□ -0.29
LRTOMT-204ENST00000412777 RPGRIP1LQ68CZ1 1315 aa13.26□□□□□ -0.29
LRTOMT-204ENST00000412777 ANKRD30BQ9BXX2 1392 aa13.25□□□□□ -0.29
LRTOMT-204ENST00000412777 XIRP1Q702N8 1843 aaKnown RBP13.25□□□□□ -0.29
LRTOMT-204ENST00000412777 NKTRP30414 1462 aaKnown RBP13.24□□□□□ -0.29
LRTOMT-204ENST00000412777 PIK3R4Q99570 1358 aa13.24□□□□□ -0.29
LRTOMT-204ENST00000412777 VGFO15240 615 aaPredicted RBP13.23□□□□□ -0.29
LRTOMT-204ENST00000412777 IFT172Q9UG01 1749 aa13.22□□□□□ -0.29
LRTOMT-204ENST00000412777 UBAP1LF5GYI3 381 aa13.22□□□□□ -0.29
LRTOMT-204ENST00000412777 RGL3Q3MIN7 710 aa13.21□□□□□ -0.29
LRTOMT-204ENST00000412777 TMEM94Q12767 1356 aa13.2□□□□□ -0.3
LRTOMT-204ENST00000412777 SETD1AO15047 1707 aaKnown RBP13.2□□□□□ -0.3
LRTOMT-204ENST00000412777 TRIM26Q12899 539 aaPredicted RBP13.2□□□□□ -0.3
LRTOMT-204ENST00000412777 PROSER2Q86WR7 435 aaPredicted RBP13.2□□□□□ -0.3
LRTOMT-204ENST00000412777 PTPRUQ92729 1446 aa13.2□□□□□ -0.3
LRTOMT-204ENST00000412777 ALKQ9UM73 1620 aa13.2□□□□□ -0.3
LRTOMT-204ENST00000412777 TOM1O60784 492 aa13.19□□□□□ -0.3
LRTOMT-204ENST00000412777 XRN1Q8IZH2 1706 aaKnown RBP13.19□□□□□ -0.3
LRTOMT-204ENST00000412777 METP08581 1390 aa13.19□□□□□ -0.3
LRTOMT-204ENST00000412777 ADGRF5Q8IZF2 1346 aa13.17□□□□□ -0.3
LRTOMT-204ENST00000412777 AMOTL2Q9Y2J4 779 aa13.17□□□□□ -0.3
LRTOMT-204ENST00000412777 NCOA3Q9Y6Q9 1424 aa13.16□□□□□ -0.3
LRTOMT-204ENST00000412777 RBM33Q96EV2 1170 aaKnown RBP13.16□□□□□ -0.3
LRTOMT-204ENST00000412777 MYOM2P54296 1465 aa13.15□□□□□ -0.3
LRTOMT-204ENST00000412777 NRXN1Q9ULB1 1477 aa13.15□□□□□ -0.3
LRTOMT-204ENST00000412777 PIK3C2GO75747 1445 aa13.14□□□□□ -0.31
LRTOMT-204ENST00000412777 MSH6P52701 1360 aa13.13□□□□□ -0.31
LRTOMT-204ENST00000412777 PIP4K2BP78356 416 aa13.13□□□□□ -0.31
LRTOMT-204ENST00000412777 PRAG1Q86YV5 1406 aa13.13□□□□□ -0.31
LRTOMT-204ENST00000412777 SCAF1Q9H7N4 1312 aaKnown RBP13.12□□□□□ -0.31
LRTOMT-204ENST00000412777 PTCH1Q13635 1447 aa13.11□□□□□ -0.31
LRTOMT-204ENST00000412777 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.1□□□□□ -0.31
LRTOMT-204ENST00000412777 DHX57Q6P158 1386 aaKnown RBP13.1□□□□□ -0.31
LRTOMT-204ENST00000412777 ASXL1Q8IXJ9 1541 aa13.1□□□□□ -0.31
LRTOMT-204ENST00000412777 LAMC1P11047 1609 aa13.1□□□□□ -0.31
LRTOMT-204ENST00000412777 ROBO2Q9HCK4 1378 aa13.09□□□□□ -0.31
LRTOMT-204ENST00000412777 C14orf37Q86TY3 774 aa13.09□□□□□ -0.31
LRTOMT-204ENST00000412777 STAC3Q96MF2 364 aa13.09□□□□□ -0.31
LRTOMT-204ENST00000412777 C19orf44Q9H6X5 657 aa13.09□□□□□ -0.31
LRTOMT-204ENST00000412777 C14orf93Q9H972 538 aaKnown RBP13.09□□□□□ -0.31
LRTOMT-204ENST00000412777 FAM135BQ49AJ0 1406 aa13.08□□□□□ -0.32
LRTOMT-204ENST00000412777 DCAF11Q8TEB1 546 aa13.08□□□□□ -0.32
LRTOMT-204ENST00000412777 LRPPRCP42704 1394 aaKnown RBP13.07□□□□□ -0.32
LRTOMT-204ENST00000412777 TECPR2O15040 1411 aa13.07□□□□□ -0.32
LRTOMT-204ENST00000412777 DCCP43146 1447 aa13.07□□□□□ -0.32
LRTOMT-204ENST00000412777 ADGRL3Q9HAR2 1447 aa13.07□□□□□ -0.32
LRTOMT-204ENST00000412777 HSPA1LP34931 641 aa13.07□□□□□ -0.32
LRTOMT-204ENST00000412777 KNDC1Q76NI1 1749 aa13.07□□□□□ -0.32
LRTOMT-204ENST00000412777 NALCNQ8IZF0 1738 aa13.07□□□□□ -0.32
LRTOMT-204ENST00000412777 ABCC11Q96J66 1382 aa13.07□□□□□ -0.32
LRTOMT-204ENST00000412777 CFAP70Q5T0N1 1121 aa13.06□□□□□ -0.32
LRTOMT-204ENST00000412777 TMEM132EQ6IEE7 984 aa13.06□□□□□ -0.32
LRTOMT-204ENST00000412777 CADPS2Q86UW7 1296 aa13.06□□□□□ -0.32
LRTOMT-204ENST00000412777 SLAIN2Q9P270 581 aa13.06□□□□□ -0.32
LRTOMT-204ENST00000412777 KDM2AQ9Y2K7 1162 aa13.06□□□□□ -0.32
LRTOMT-204ENST00000412777 ROBO1Q9Y6N7 1651 aa13.05□□□□□ -0.32
LRTOMT-204ENST00000412777 YTHDC2Q9H6S0 1430 aaKnown RBP13.05□□□□□ -0.32
LRTOMT-204ENST00000412777 ATF3P18847 181 aa13.05□□□□□ -0.32
LRTOMT-204ENST00000412777 STK26Q9P289 416 aa13.04□□□□□ -0.32
LRTOMT-204ENST00000412777 ADGRB1O14514 1584 aa13.03□□□□□ -0.32
LRTOMT-204ENST00000412777 SIN3AQ96ST3 1273 aa13.03□□□□□ -0.32
LRTOMT-204ENST00000412777 MST1RQ04912 1400 aa13.02□□□□□ -0.33
LRTOMT-204ENST00000412777 SIRT1Q96EB6 747 aa13.01□□□□□ -0.33
LRTOMT-204ENST00000412777 KIAA1210Q9ULL0 1709 aa13□□□□□ -0.33
LRTOMT-204ENST00000412777 DLC1Q96QB1 1528 aa13□□□□□ -0.33
LRTOMT-204ENST00000412777 PLEKHH1Q9ULM0 1364 aa13□□□□□ -0.33
LRTOMT-204ENST00000412777 WAPLQ7Z5K2 1190 aa13□□□□□ -0.33
LRTOMT-204ENST00000412777 L3MBTL2Q969R5 705 aa13□□□□□ -0.33
LRTOMT-204ENST00000412777 CDC42BPGQ6DT37 1551 aa12.99□□□□□ -0.33
LRTOMT-204ENST00000412777 NEUROD1Q13562 356 aa12.99□□□□□ -0.33
LRTOMT-204ENST00000412777 BRINP3Q76B58 766 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms