RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 SETD5Q9C0A6 1442 aa24.16■■□□□ 1.46
DDR1-230ENST00000412274 TRPM2O94759 1503 aa24.15■■□□□ 1.46
DDR1-230ENST00000412274 PLEKHG1Q9ULL1 1385 aa24.15■■□□□ 1.46
DDR1-230ENST00000412274 MYO5BQ9ULV0 1848 aa24.13■■□□□ 1.45
DDR1-230ENST00000412274 BCANQ96GW7 911 aa24.11■■□□□ 1.45
DDR1-230ENST00000412274 KCNA6P17658 529 aa24.08■■□□□ 1.45
DDR1-230ENST00000412274 UBAP1LF5GYI3 381 aa24.07■■□□□ 1.44
DDR1-230ENST00000412274 TOM1O60784 492 aa24.07■■□□□ 1.44
DDR1-230ENST00000412274 HRCP23327 699 aa24.07■■□□□ 1.44
DDR1-230ENST00000412274 MPHOSPH9Q99550 1183 aa24.07■■□□□ 1.44
DDR1-230ENST00000412274 TBX22Q9Y458 520 aa24.07■■□□□ 1.44
DDR1-230ENST00000412274 SLC26A8Q96RN1 970 aa24.06■■□□□ 1.44
DDR1-230ENST00000412274 KIF1BO60333 1816 aa24.05■■□□□ 1.44
DDR1-230ENST00000412274 LRRC7Q96NW7 1537 aa24.05■■□□□ 1.44
DDR1-230ENST00000412274 ZNF326Q5BKZ1 582 aaKnown RBP24.05■■□□□ 1.44
DDR1-230ENST00000412274 CLTCL1P53675 1640 aa24.05■■□□□ 1.44
DDR1-230ENST00000412274 DIP2AQ14689 1571 aa24.03■■□□□ 1.44
DDR1-230ENST00000412274 STRCP1A6NGW2 1772 aa24.03■■□□□ 1.44
DDR1-230ENST00000412274 PIK3R4Q99570 1358 aa24.03■■□□□ 1.44
DDR1-230ENST00000412274 RPGRIP1LQ68CZ1 1315 aa24.02■■□□□ 1.44
DDR1-230ENST00000412274 RAB3GAP2Q9H2M9 1393 aa24.02■■□□□ 1.44
DDR1-230ENST00000412274 NKTRP30414 1462 aaKnown RBP24■■□□□ 1.43
DDR1-230ENST00000412274 CCDC144AA2RUR9 1427 aa23.99■■□□□ 1.43
DDR1-230ENST00000412274 NWD1Q149M9 1564 aa23.99■■□□□ 1.43
DDR1-230ENST00000412274 VGFO15240 615 aaPredicted RBP23.98■■□□□ 1.43
DDR1-230ENST00000412274 ADAMTS13Q76LX8 1427 aa23.96■■□□□ 1.43
DDR1-230ENST00000412274 NUTM2DQ5VT03 806 aaPredicted RBP23.96■■□□□ 1.43
DDR1-230ENST00000412274 PROSER2Q86WR7 435 aaPredicted RBP23.95■■□□□ 1.42
DDR1-230ENST00000412274 CHD2O14647 1828 aaKnown RBP23.95■■□□□ 1.42
DDR1-230ENST00000412274 SETBP1Q9Y6X0 1596 aa23.95■■□□□ 1.42
DDR1-230ENST00000412274 NEXMIFQ5QGS0 1516 aa23.94■■□□□ 1.42
DDR1-230ENST00000412274 FOXD1Q16676 465 aa23.93■■□□□ 1.42
DDR1-230ENST00000412274 NCOA3Q9Y6Q9 1424 aa23.93■■□□□ 1.42
DDR1-230ENST00000412274 TMEM94Q12767 1356 aa23.91■■□□□ 1.42
DDR1-230ENST00000412274 XIRP1Q702N8 1843 aaKnown RBP23.87■■□□□ 1.41
DDR1-230ENST00000412274 PIP4K2BP78356 416 aa23.87■■□□□ 1.41
DDR1-230ENST00000412274 SCAF1Q9H7N4 1312 aaKnown RBP23.86■■□□□ 1.41
DDR1-230ENST00000412274 NRXN3Q9Y4C0 1643 aa23.86■■□□□ 1.41
DDR1-230ENST00000412274 SENP3Q9H4L4 574 aaPredicted RBP23.86■■□□□ 1.41
DDR1-230ENST00000412274 ANKRD30BQ9BXX2 1392 aa23.86■■□□□ 1.41
DDR1-230ENST00000412274 MSH6P52701 1360 aa23.85■■□□□ 1.41
DDR1-230ENST00000412274 SPATA31E1Q6ZUB1 1445 aa23.84■■□□□ 1.41
DDR1-230ENST00000412274 AMOTL2Q9Y2J4 779 aa23.84■■□□□ 1.41
DDR1-230ENST00000412274 PPLO60437 1756 aa23.83■■□□□ 1.41
DDR1-230ENST00000412274 ALKQ9UM73 1620 aa23.82■■□□□ 1.4
DDR1-230ENST00000412274 RGL3Q3MIN7 710 aa23.8■■□□□ 1.4
DDR1-230ENST00000412274 PTPRUQ92729 1446 aa23.78■■□□□ 1.4
DDR1-230ENST00000412274 C19orf44Q9H6X5 657 aa23.78■■□□□ 1.4
DDR1-230ENST00000412274 METP08581 1390 aa23.78■■□□□ 1.4
DDR1-230ENST00000412274 FAM135BQ49AJ0 1406 aa23.77■■□□□ 1.4
DDR1-230ENST00000412274 XRN1Q8IZH2 1706 aaKnown RBP23.76■■□□□ 1.39
DDR1-230ENST00000412274 C14orf37Q86TY3 774 aa23.76■■□□□ 1.39
DDR1-230ENST00000412274 CADPS2Q86UW7 1296 aa23.75■■□□□ 1.39
DDR1-230ENST00000412274 STAC3Q96MF2 364 aa23.75■■□□□ 1.39
DDR1-230ENST00000412274 IFT172Q9UG01 1749 aa23.74■■□□□ 1.39
DDR1-230ENST00000412274 HSPA1LP34931 641 aa23.74■■□□□ 1.39
DDR1-230ENST00000412274 RBM33Q96EV2 1170 aaKnown RBP23.74■■□□□ 1.39
DDR1-230ENST00000412274 ATF3P18847 181 aa23.72■■□□□ 1.39
DDR1-230ENST00000412274 SLAIN2Q9P270 581 aa23.72■■□□□ 1.39
DDR1-230ENST00000412274 PRAG1Q86YV5 1406 aa23.72■■□□□ 1.39
DDR1-230ENST00000412274 DCCP43146 1447 aa23.71■■□□□ 1.39
DDR1-230ENST00000412274 ADGRF5Q8IZF2 1346 aa23.71■■□□□ 1.39
DDR1-230ENST00000412274 SETD1AO15047 1707 aaKnown RBP23.7■■□□□ 1.39
DDR1-230ENST00000412274 PTCH1Q13635 1447 aa23.7■■□□□ 1.38
DDR1-230ENST00000412274 MYOM2P54296 1465 aa23.68■■□□□ 1.38
DDR1-230ENST00000412274 PIK3C2GO75747 1445 aa23.67■■□□□ 1.38
DDR1-230ENST00000412274 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.67■■□□□ 1.38
DDR1-230ENST00000412274 NRXN1Q9ULB1 1477 aa23.65■■□□□ 1.38
DDR1-230ENST00000412274 ROBO1Q9Y6N7 1651 aa23.64■■□□□ 1.37
DDR1-230ENST00000412274 C14orf93Q9H972 538 aaKnown RBP23.63■■□□□ 1.37
DDR1-230ENST00000412274 ADGRL3Q9HAR2 1447 aa23.63■■□□□ 1.37
DDR1-230ENST00000412274 LAMC1P11047 1609 aa23.62■■□□□ 1.37
DDR1-230ENST00000412274 ABCC11Q96J66 1382 aa23.61■■□□□ 1.37
DDR1-230ENST00000412274 TRIM26Q12899 539 aaPredicted RBP23.6■■□□□ 1.37
DDR1-230ENST00000412274 LRPPRCP42704 1394 aaKnown RBP23.6■■□□□ 1.37
DDR1-230ENST00000412274 TECPR2O15040 1411 aa23.59■■□□□ 1.37
DDR1-230ENST00000412274 SIRT1Q96EB6 747 aa23.59■■□□□ 1.37
DDR1-230ENST00000412274 ROBO2Q9HCK4 1378 aa23.59■■□□□ 1.37
DDR1-230ENST00000412274 DHX57Q6P158 1386 aaKnown RBP23.57■■□□□ 1.36
DDR1-230ENST00000412274 DCAF11Q8TEB1 546 aa23.57■■□□□ 1.36
DDR1-230ENST00000412274 DISP3Q9P2K9 1392 aa23.56■■□□□ 1.36
DDR1-230ENST00000412274 KNDC1Q76NI1 1749 aa23.54■■□□□ 1.36
DDR1-230ENST00000412274 YTHDC2Q9H6S0 1430 aaKnown RBP23.54■■□□□ 1.36
DDR1-230ENST00000412274 NALCNQ8IZF0 1738 aa23.53■■□□□ 1.36
DDR1-230ENST00000412274 CFAP70Q5T0N1 1121 aa23.53■■□□□ 1.36
DDR1-230ENST00000412274 TMEM132EQ6IEE7 984 aa23.53■■□□□ 1.36
DDR1-230ENST00000412274 MST1RQ04912 1400 aa23.52■■□□□ 1.36
DDR1-230ENST00000412274 STK26Q9P289 416 aa23.52■■□□□ 1.36
DDR1-230ENST00000412274 ASXL1Q8IXJ9 1541 aa23.51■■□□□ 1.35
DDR1-230ENST00000412274 KDM2AQ9Y2K7 1162 aa23.51■■□□□ 1.35
DDR1-230ENST00000412274 BRINP3Q76B58 766 aa23.5■■□□□ 1.35
DDR1-230ENST00000412274 AHDC1Q5TGY3 1603 aaPredicted RBP23.5■■□□□ 1.35
DDR1-230ENST00000412274 PHLPP1O60346 1717 aa23.5■■□□□ 1.35
DDR1-230ENST00000412274 MED1Q15648 1581 aaPredicted RBP23.47■■□□□ 1.35
DDR1-230ENST00000412274 CDC42BPGQ6DT37 1551 aa23.46■■□□□ 1.35
DDR1-230ENST00000412274 JCADQ9P266 1359 aa23.46■■□□□ 1.35
DDR1-230ENST00000412274 DLC1Q96QB1 1528 aa23.45■■□□□ 1.34
DDR1-230ENST00000412274 C1orf167Q5SNV9 1468 aa23.45■■□□□ 1.34
DDR1-230ENST00000412274 WAPLQ7Z5K2 1190 aa23.45■■□□□ 1.34
DDR1-230ENST00000412274 COL16A1Q07092 1604 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms