RNA–Protein interactions for RNA: ENST00000411985.5

BRCC3-207, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-207ENST00000411985 SLC52A1Q9NWF4 448 aa13.92□□□□□ -0.18
BRCC3-207ENST00000411985 PPP4R3CPQ6ZMV5 832 aa13.91□□□□□ -0.18
BRCC3-207ENST00000411985 CHD2O14647 1828 aaKnown RBP13.91□□□□□ -0.18
BRCC3-207ENST00000411985 CLTCL1P53675 1640 aa13.9□□□□□ -0.19
BRCC3-207ENST00000411985 LTKP29376 864 aa13.89□□□□□ -0.19
BRCC3-207ENST00000411985 TXNDC2Q86VQ3 553 aa13.89□□□□□ -0.19
BRCC3-207ENST00000411985 EID1Q9Y6B2 187 aa13.89□□□□□ -0.19
BRCC3-207ENST00000411985 TRPM2O94759 1503 aa13.88□□□□□ -0.19
BRCC3-207ENST00000411985 ZFYVE9O95405 1425 aa13.87□□□□□ -0.19
BRCC3-207ENST00000411985 NWD1Q149M9 1564 aa13.86□□□□□ -0.19
BRCC3-207ENST00000411985 LRRC7Q96NW7 1537 aa13.85□□□□□ -0.19
BRCC3-207ENST00000411985 RIMS2Q9UQ26 1411 aa13.84□□□□□ -0.19
BRCC3-207ENST00000411985 DIP2AQ14689 1571 aa13.83□□□□□ -0.19
BRCC3-207ENST00000411985 PPLO60437 1756 aa13.83□□□□□ -0.19
BRCC3-207ENST00000411985 NRXN3Q9Y4C0 1643 aa13.82□□□□□ -0.2
BRCC3-207ENST00000411985 ALKQ9UM73 1620 aa13.82□□□□□ -0.2
BRCC3-207ENST00000411985 CHGAP10645 457 aaKnown RBP13.81□□□□□ -0.2
BRCC3-207ENST00000411985 PLEKHG1Q9ULL1 1385 aa13.81□□□□□ -0.2
BRCC3-207ENST00000411985 IFT172Q9UG01 1749 aa13.81□□□□□ -0.2
BRCC3-207ENST00000411985 UBAP1LF5GYI3 381 aa13.8□□□□□ -0.2
BRCC3-207ENST00000411985 HDGFP51858 240 aaKnown RBP13.8□□□□□ -0.2
BRCC3-207ENST00000411985 TRIM52Q96A61 297 aa13.8□□□□□ -0.2
BRCC3-207ENST00000411985 NEXMIFQ5QGS0 1516 aa13.8□□□□□ -0.2
BRCC3-207ENST00000411985 NKTRP30414 1462 aaKnown RBP13.79□□□□□ -0.2
BRCC3-207ENST00000411985 PPP1R15AO75807 674 aaPredicted RBP13.78□□□□□ -0.2
BRCC3-207ENST00000411985 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.78□□□□□ -0.2
BRCC3-207ENST00000411985 SETBP1Q9Y6X0 1596 aa13.78□□□□□ -0.2
BRCC3-207ENST00000411985 SETD1AO15047 1707 aaKnown RBP13.78□□□□□ -0.2
BRCC3-207ENST00000411985 SLC26A8Q96RN1 970 aa13.77□□□□□ -0.21
BRCC3-207ENST00000411985 TOM1O60784 492 aa13.76□□□□□ -0.21
BRCC3-207ENST00000411985 BCANQ96GW7 911 aa13.76□□□□□ -0.21
BRCC3-207ENST00000411985 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
BRCC3-207ENST00000411985 XRN1Q8IZH2 1706 aaKnown RBP13.76□□□□□ -0.21
BRCC3-207ENST00000411985 ADAMTS13Q76LX8 1427 aa13.74□□□□□ -0.21
BRCC3-207ENST00000411985 SETD5Q9C0A6 1442 aa13.74□□□□□ -0.21
BRCC3-207ENST00000411985 NUTM2DQ5VT03 806 aaPredicted RBP13.74□□□□□ -0.21
BRCC3-207ENST00000411985 KCNA6P17658 529 aa13.73□□□□□ -0.21
BRCC3-207ENST00000411985 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.73□□□□□ -0.21
BRCC3-207ENST00000411985 ROBO1Q9Y6N7 1651 aa13.72□□□□□ -0.21
BRCC3-207ENST00000411985 ACIN1Q9UKV3 1341 aaKnown RBP13.72□□□□□ -0.21
BRCC3-207ENST00000411985 ZNF326Q5BKZ1 582 aaKnown RBP13.72□□□□□ -0.21
BRCC3-207ENST00000411985 PIP4K2BP78356 416 aa13.71□□□□□ -0.21
BRCC3-207ENST00000411985 TMEM94Q12767 1356 aa13.71□□□□□ -0.22
BRCC3-207ENST00000411985 PIK3R4Q99570 1358 aa13.71□□□□□ -0.22
BRCC3-207ENST00000411985 TBX22Q9Y458 520 aa13.7□□□□□ -0.22
BRCC3-207ENST00000411985 RAB3GAP2Q9H2M9 1393 aa13.7□□□□□ -0.22
BRCC3-207ENST00000411985 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
BRCC3-207ENST00000411985 CCDC144AA2RUR9 1427 aa13.69□□□□□ -0.22
BRCC3-207ENST00000411985 NALCNQ8IZF0 1738 aa13.68□□□□□ -0.22
BRCC3-207ENST00000411985 PROSER2Q86WR7 435 aaPredicted RBP13.67□□□□□ -0.22
BRCC3-207ENST00000411985 PHLPP1O60346 1717 aa13.67□□□□□ -0.22
BRCC3-207ENST00000411985 PTPRUQ92729 1446 aa13.66□□□□□ -0.22
BRCC3-207ENST00000411985 NCOA3Q9Y6Q9 1424 aa13.65□□□□□ -0.22
BRCC3-207ENST00000411985 KNDC1Q76NI1 1749 aa13.65□□□□□ -0.22
BRCC3-207ENST00000411985 RBM33Q96EV2 1170 aaKnown RBP13.65□□□□□ -0.22
BRCC3-207ENST00000411985 MSH6P52701 1360 aa13.65□□□□□ -0.22
BRCC3-207ENST00000411985 LAMC1P11047 1609 aa13.64□□□□□ -0.23
BRCC3-207ENST00000411985 SPATA31E1Q6ZUB1 1445 aa13.64□□□□□ -0.23
BRCC3-207ENST00000411985 RPGRIP1LQ68CZ1 1315 aa13.64□□□□□ -0.23
BRCC3-207ENST00000411985 HSPA1LP34931 641 aa13.63□□□□□ -0.23
BRCC3-207ENST00000411985 MED1Q15648 1581 aaPredicted RBP13.62□□□□□ -0.23
BRCC3-207ENST00000411985 METP08581 1390 aa13.62□□□□□ -0.23
BRCC3-207ENST00000411985 VGFO15240 615 aaPredicted RBP13.62□□□□□ -0.23
BRCC3-207ENST00000411985 AMOTL2Q9Y2J4 779 aa13.61□□□□□ -0.23
BRCC3-207ENST00000411985 FAM135BQ49AJ0 1406 aa13.61□□□□□ -0.23
BRCC3-207ENST00000411985 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
BRCC3-207ENST00000411985 DISP3Q9P2K9 1392 aa13.58□□□□□ -0.23
BRCC3-207ENST00000411985 NHSL1Q5SYE7 1610 aa13.58□□□□□ -0.24
BRCC3-207ENST00000411985 C14orf37Q86TY3 774 aa13.58□□□□□ -0.24
BRCC3-207ENST00000411985 ANKRD30BQ9BXX2 1392 aa13.58□□□□□ -0.24
BRCC3-207ENST00000411985 COL16A1Q07092 1604 aaPredicted RBP13.57□□□□□ -0.24
BRCC3-207ENST00000411985 DCCP43146 1447 aa13.57□□□□□ -0.24
BRCC3-207ENST00000411985 PTCH1Q13635 1447 aa13.57□□□□□ -0.24
BRCC3-207ENST00000411985 PRAG1Q86YV5 1406 aa13.57□□□□□ -0.24
BRCC3-207ENST00000411985 HRCP23327 699 aa13.57□□□□□ -0.24
BRCC3-207ENST00000411985 PIK3C2GO75747 1445 aa13.56□□□□□ -0.24
BRCC3-207ENST00000411985 MYOM2P54296 1465 aa13.56□□□□□ -0.24
BRCC3-207ENST00000411985 ASXL1Q8IXJ9 1541 aa13.56□□□□□ -0.24
BRCC3-207ENST00000411985 RGL3Q3MIN7 710 aa13.56□□□□□ -0.24
BRCC3-207ENST00000411985 AHDC1Q5TGY3 1603 aaPredicted RBP13.56□□□□□ -0.24
BRCC3-207ENST00000411985 C19orf44Q9H6X5 657 aa13.55□□□□□ -0.24
BRCC3-207ENST00000411985 SLAIN2Q9P270 581 aa13.55□□□□□ -0.24
BRCC3-207ENST00000411985 SHPRHQ149N8 1683 aa13.55□□□□□ -0.24
BRCC3-207ENST00000411985 ADGRL3Q9HAR2 1447 aa13.55□□□□□ -0.24
BRCC3-207ENST00000411985 NRXN1Q9ULB1 1477 aa13.55□□□□□ -0.24
BRCC3-207ENST00000411985 RGPD8O14715 1765 aaPredicted RBP13.54□□□□□ -0.24
BRCC3-207ENST00000411985 CADPS2Q86UW7 1296 aa13.54□□□□□ -0.24
BRCC3-207ENST00000411985 ADGRF5Q8IZF2 1346 aa13.54□□□□□ -0.24
BRCC3-207ENST00000411985 ATF3P18847 181 aa13.53□□□□□ -0.24
BRCC3-207ENST00000411985 CDC42BPGQ6DT37 1551 aa13.52□□□□□ -0.25
BRCC3-207ENST00000411985 FMN2Q9NZ56 1722 aa13.51□□□□□ -0.25
BRCC3-207ENST00000411985 MST1RQ04912 1400 aa13.51□□□□□ -0.25
BRCC3-207ENST00000411985 ROBO2Q9HCK4 1378 aa13.51□□□□□ -0.25
BRCC3-207ENST00000411985 TECPR2O15040 1411 aa13.5□□□□□ -0.25
BRCC3-207ENST00000411985 KIAA1210Q9ULL0 1709 aa13.5□□□□□ -0.25
BRCC3-207ENST00000411985 ARHGEF28Q8N1W1 1705 aaKnown RBP13.48□□□□□ -0.25
BRCC3-207ENST00000411985 YTHDC2Q9H6S0 1430 aaKnown RBP13.47□□□□□ -0.25
BRCC3-207ENST00000411985 LRPPRCP42704 1394 aaKnown RBP13.46□□□□□ -0.25
BRCC3-207ENST00000411985 HOXD11P31277 338 aaPredicted RBP13.46□□□□□ -0.25
BRCC3-207ENST00000411985 ADGRB1O14514 1584 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms