RNA–Protein interactions for RNA: ENST00000411836.1

LSM12P1-201, Transcript of LSM12 pseudogene 1, humanhuman

BASIC

Gene LSM12P1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12P1-201ENST00000411836 ILDR1Q86SU0 546 aaPredicted RBP30.26■■■□□ 2.43
LSM12P1-201ENST00000411836 LTBP4Q8N2S1 1624 aa30.25■■■□□ 2.43
LSM12P1-201ENST00000411836 FBXO41Q8TF61 875 aa30.25■■■□□ 2.43
LSM12P1-201ENST00000411836 TRPM2O94759 1503 aa30.25■■■□□ 2.43
LSM12P1-201ENST00000411836 SENP3Q9H4L4 574 aaPredicted RBP30.24■■■□□ 2.43
LSM12P1-201ENST00000411836 MYO5BQ9ULV0 1848 aa30.24■■■□□ 2.43
LSM12P1-201ENST00000411836 NUTM2DQ5VT03 806 aaPredicted RBP30.23■■■□□ 2.43
LSM12P1-201ENST00000411836 ZFYVE9O95405 1425 aa30.21■■■□□ 2.43
LSM12P1-201ENST00000411836 CLTCL1P53675 1640 aa30.19■■■□□ 2.42
LSM12P1-201ENST00000411836 SLC26A8Q96RN1 970 aa30.19■■■□□ 2.42
LSM12P1-201ENST00000411836 HRCP23327 699 aa30.17■■■□□ 2.42
LSM12P1-201ENST00000411836 PLEKHG1Q9ULL1 1385 aa30.15■■■□□ 2.42
LSM12P1-201ENST00000411836 CPS1P31327 1500 aa30.15■■■□□ 2.42
LSM12P1-201ENST00000411836 CCDC144AA2RUR9 1427 aa30.13■■■□□ 2.41
LSM12P1-201ENST00000411836 KIF1BO60333 1816 aa30.11■■■□□ 2.41
LSM12P1-201ENST00000411836 IQSEC2Q5JU85 1478 aa30.11■■■□□ 2.41
LSM12P1-201ENST00000411836 KCNA6P17658 529 aa30.04■■■□□ 2.4
LSM12P1-201ENST00000411836 TBX22Q9Y458 520 aa30.04■■■□□ 2.4
LSM12P1-201ENST00000411836 RPGRIP1LQ68CZ1 1315 aa30.03■■■□□ 2.4
LSM12P1-201ENST00000411836 UBAP1LF5GYI3 381 aa30.02■■■□□ 2.4
LSM12P1-201ENST00000411836 VGFO15240 615 aaPredicted RBP30.02■■■□□ 2.4
LSM12P1-201ENST00000411836 RGL3Q3MIN7 710 aa30.02■■■□□ 2.4
LSM12P1-201ENST00000411836 STRCP1A6NGW2 1772 aa29.99■■■□□ 2.39
LSM12P1-201ENST00000411836 NEXMIFQ5QGS0 1516 aa29.98■■■□□ 2.39
LSM12P1-201ENST00000411836 TRIM26Q12899 539 aaPredicted RBP29.98■■■□□ 2.39
LSM12P1-201ENST00000411836 LRRC7Q96NW7 1537 aa29.97■■■□□ 2.39
LSM12P1-201ENST00000411836 PROSER2Q86WR7 435 aaPredicted RBP29.97■■■□□ 2.39
LSM12P1-201ENST00000411836 ADAMTS13Q76LX8 1427 aa29.96■■■□□ 2.39
LSM12P1-201ENST00000411836 TOM1O60784 492 aa29.95■■■□□ 2.39
LSM12P1-201ENST00000411836 DIP2AQ14689 1571 aa29.94■■■□□ 2.38
LSM12P1-201ENST00000411836 SPATA31E1Q6ZUB1 1445 aa29.91■■■□□ 2.38
LSM12P1-201ENST00000411836 SCAF1Q9H7N4 1312 aaKnown RBP29.91■■■□□ 2.38
LSM12P1-201ENST00000411836 PIK3R4Q99570 1358 aa29.9■■■□□ 2.38
LSM12P1-201ENST00000411836 ANKRD30BQ9BXX2 1392 aa29.9■■■□□ 2.38
LSM12P1-201ENST00000411836 SETBP1Q9Y6X0 1596 aa29.9■■■□□ 2.38
LSM12P1-201ENST00000411836 TMEM94Q12767 1356 aa29.89■■■□□ 2.37
LSM12P1-201ENST00000411836 RBM33Q96EV2 1170 aaKnown RBP29.88■■■□□ 2.37
LSM12P1-201ENST00000411836 NKTRP30414 1462 aaKnown RBP29.87■■■□□ 2.37
LSM12P1-201ENST00000411836 PIP4K2BP78356 416 aa29.87■■■□□ 2.37
LSM12P1-201ENST00000411836 AMOTL2Q9Y2J4 779 aa29.87■■■□□ 2.37
LSM12P1-201ENST00000411836 NWD1Q149M9 1564 aa29.86■■■□□ 2.37
LSM12P1-201ENST00000411836 CHD2O14647 1828 aaKnown RBP29.85■■■□□ 2.37
LSM12P1-201ENST00000411836 NRXN3Q9Y4C0 1643 aa29.84■■■□□ 2.37
LSM12P1-201ENST00000411836 PPLO60437 1756 aa29.84■■■□□ 2.37
LSM12P1-201ENST00000411836 C14orf37Q86TY3 774 aa29.83■■■□□ 2.37
LSM12P1-201ENST00000411836 METP08581 1390 aa29.82■■■□□ 2.36
LSM12P1-201ENST00000411836 ADGRF5Q8IZF2 1346 aa29.81■■■□□ 2.36
LSM12P1-201ENST00000411836 PTPRUQ92729 1446 aa29.79■■■□□ 2.36
LSM12P1-201ENST00000411836 MSH6P52701 1360 aa29.77■■■□□ 2.36
LSM12P1-201ENST00000411836 ALKQ9UM73 1620 aa29.75■■■□□ 2.35
LSM12P1-201ENST00000411836 XIRP1Q702N8 1843 aaKnown RBP29.73■■■□□ 2.35
LSM12P1-201ENST00000411836 IFT172Q9UG01 1749 aa29.71■■■□□ 2.35
LSM12P1-201ENST00000411836 KDM2AQ9Y2K7 1162 aa29.71■■■□□ 2.35
LSM12P1-201ENST00000411836 NCOA3Q9Y6Q9 1424 aa29.71■■■□□ 2.35
LSM12P1-201ENST00000411836 DCAF11Q8TEB1 546 aa29.7■■■□□ 2.35
LSM12P1-201ENST00000411836 C19orf44Q9H6X5 657 aa29.67■■■□□ 2.34
LSM12P1-201ENST00000411836 PIK3C2GO75747 1445 aa29.67■■■□□ 2.34
LSM12P1-201ENST00000411836 XRN1Q8IZH2 1706 aaKnown RBP29.67■■■□□ 2.34
LSM12P1-201ENST00000411836 ATF3P18847 181 aa29.66■■■□□ 2.34
LSM12P1-201ENST00000411836 MYOM2P54296 1465 aa29.66■■■□□ 2.34
LSM12P1-201ENST00000411836 STAC3Q96MF2 364 aa29.64■■■□□ 2.34
LSM12P1-201ENST00000411836 STK26Q9P289 416 aa29.64■■■□□ 2.34
LSM12P1-201ENST00000411836 TMEM132EQ6IEE7 984 aa29.63■■■□□ 2.33
LSM12P1-201ENST00000411836 C14orf93Q9H972 538 aaKnown RBP29.63■■■□□ 2.33
LSM12P1-201ENST00000411836 SETD1AO15047 1707 aaKnown RBP29.62■■■□□ 2.33
LSM12P1-201ENST00000411836 CFAP70Q5T0N1 1121 aa29.62■■■□□ 2.33
LSM12P1-201ENST00000411836 CADPS2Q86UW7 1296 aa29.62■■■□□ 2.33
LSM12P1-201ENST00000411836 HSPA1LP34931 641 aa29.61■■■□□ 2.33
LSM12P1-201ENST00000411836 SLAIN2Q9P270 581 aa29.61■■■□□ 2.33
LSM12P1-201ENST00000411836 DHX57Q6P158 1386 aaKnown RBP29.59■■■□□ 2.33
LSM12P1-201ENST00000411836 NRXN1Q9ULB1 1477 aa29.59■■■□□ 2.33
LSM12P1-201ENST00000411836 NEUROD1Q13562 356 aa29.58■■■□□ 2.33
LSM12P1-201ENST00000411836 ROBO2Q9HCK4 1378 aa29.58■■■□□ 2.33
LSM12P1-201ENST00000411836 PTCH1Q13635 1447 aa29.57■■■□□ 2.32
LSM12P1-201ENST00000411836 LRPPRCP42704 1394 aaKnown RBP29.56■■■□□ 2.32
LSM12P1-201ENST00000411836 SIN3AQ96ST3 1273 aa29.56■■■□□ 2.32
LSM12P1-201ENST00000411836 FAM135BQ49AJ0 1406 aa29.54■■■□□ 2.32
LSM12P1-201ENST00000411836 PCGF6Q9BYE7 350 aa29.53■■■□□ 2.32
LSM12P1-201ENST00000411836 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.53■■■□□ 2.32
LSM12P1-201ENST00000411836 YTHDC2Q9H6S0 1430 aaKnown RBP29.52■■■□□ 2.32
LSM12P1-201ENST00000411836 ADGRL3Q9HAR2 1447 aa29.52■■■□□ 2.32
LSM12P1-201ENST00000411836 LAMC1P11047 1609 aa29.52■■■□□ 2.32
LSM12P1-201ENST00000411836 ABCC11Q96J66 1382 aa29.52■■■□□ 2.32
LSM12P1-201ENST00000411836 PRAG1Q86YV5 1406 aa29.51■■■□□ 2.31
LSM12P1-201ENST00000411836 DCCP43146 1447 aa29.5■■■□□ 2.31
LSM12P1-201ENST00000411836 ASXL1Q8IXJ9 1541 aa29.49■■■□□ 2.31
LSM12P1-201ENST00000411836 WAPLQ7Z5K2 1190 aa29.48■■■□□ 2.31
LSM12P1-201ENST00000411836 TECPR2O15040 1411 aa29.46■■■□□ 2.31
LSM12P1-201ENST00000411836 ROBO1Q9Y6N7 1651 aa29.46■■■□□ 2.31
LSM12P1-201ENST00000411836 L3MBTL2Q969R5 705 aa29.45■■■□□ 2.31
LSM12P1-201ENST00000411836 SIRT1Q96EB6 747 aa29.43■■■□□ 2.3
LSM12P1-201ENST00000411836 NALCNQ8IZF0 1738 aa29.42■■■□□ 2.3
LSM12P1-201ENST00000411836 POGKQ9P215 609 aa29.42■■■□□ 2.3
LSM12P1-201ENST00000411836 TRAK1Q9UPV9 953 aa29.41■■■□□ 2.3
LSM12P1-201ENST00000411836 KNDC1Q76NI1 1749 aa29.4■■■□□ 2.3
LSM12P1-201ENST00000411836 PLEKHH1Q9ULM0 1364 aa29.39■■■□□ 2.3
LSM12P1-201ENST00000411836 PRAM1Q96QH2 718 aa29.39■■■□□ 2.3
LSM12P1-201ENST00000411836 MST1RQ04912 1400 aa29.38■■■□□ 2.29
LSM12P1-201ENST00000411836 SAFB2Q14151 953 aaKnown RBP eCLIP29.38■■■□□ 2.29
LSM12P1-201ENST00000411836 BRINP3Q76B58 766 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms