RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 RPRD2Q5VT52 1461 aaKnown RBP22.08■■□□□ 1.12
HLA-DQB2-229ENST00000411527 MYO5BQ9ULV0 1848 aa22.08■■□□□ 1.12
HLA-DQB2-229ENST00000411527 ROBO1Q9Y6N7 1651 aa22.07■■□□□ 1.12
HLA-DQB2-229ENST00000411527 NWD1Q149M9 1564 aa22.05■■□□□ 1.12
HLA-DQB2-229ENST00000411527 NKTRP30414 1462 aaKnown RBP22.05■■□□□ 1.12
HLA-DQB2-229ENST00000411527 PPP1R15AO75807 674 aaPredicted RBP22.04■■□□□ 1.12
HLA-DQB2-229ENST00000411527 HDGFP51858 240 aaKnown RBP22.04■■□□□ 1.12
HLA-DQB2-229ENST00000411527 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
HLA-DQB2-229ENST00000411527 MSH6P52701 1360 aa22.03■■□□□ 1.12
HLA-DQB2-229ENST00000411527 ZFYVE9O95405 1425 aa22.03■■□□□ 1.12
HLA-DQB2-229ENST00000411527 PLEKHG1Q9ULL1 1385 aa22.02■■□□□ 1.12
HLA-DQB2-229ENST00000411527 CHD2O14647 1828 aaKnown RBP22.02■■□□□ 1.12
HLA-DQB2-229ENST00000411527 RIMS2Q9UQ26 1411 aa22.02■■□□□ 1.12
HLA-DQB2-229ENST00000411527 SLAIN2Q9P270 581 aa22.01■■□□□ 1.11
HLA-DQB2-229ENST00000411527 TMEM131LA2VDJ0 1609 aa22.01■■□□□ 1.11
HLA-DQB2-229ENST00000411527 CHGAP10645 457 aaKnown RBP22■■□□□ 1.11
HLA-DQB2-229ENST00000411527 UNC13BO14795 1591 aa21.98■■□□□ 1.11
HLA-DQB2-229ENST00000411527 POTEAQ6S8J7 498 aa21.97■■□□□ 1.11
HLA-DQB2-229ENST00000411527 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.97■■□□□ 1.11
HLA-DQB2-229ENST00000411527 TBX22Q9Y458 520 aa21.97■■□□□ 1.11
HLA-DQB2-229ENST00000411527 NUTM2DQ5VT03 806 aaPredicted RBP21.96■■□□□ 1.11
HLA-DQB2-229ENST00000411527 PHLPP1O60346 1717 aa21.96■■□□□ 1.11
HLA-DQB2-229ENST00000411527 E9PCH4 1651 aa21.95■■□□□ 1.1
HLA-DQB2-229ENST00000411527 C14orf37Q86TY3 774 aa21.93■■□□□ 1.1
HLA-DQB2-229ENST00000411527 ROCK1Q13464 1354 aa21.91■■□□□ 1.1
HLA-DQB2-229ENST00000411527 JCADQ9P266 1359 aa21.9■■□□□ 1.1
HLA-DQB2-229ENST00000411527 IQGAP3Q86VI3 1631 aa21.9■■□□□ 1.1
HLA-DQB2-229ENST00000411527 ADAMTS13Q76LX8 1427 aa21.89■■□□□ 1.1
HLA-DQB2-229ENST00000411527 NCOA3Q9Y6Q9 1424 aa21.89■■□□□ 1.1
HLA-DQB2-229ENST00000411527 NUP155O75694 1391 aa21.88■■□□□ 1.09
HLA-DQB2-229ENST00000411527 ITGAEP38570 1179 aa21.88■■□□□ 1.09
HLA-DQB2-229ENST00000411527 DIP2AQ14689 1571 aa21.87■■□□□ 1.09
HLA-DQB2-229ENST00000411527 C19orf44Q9H6X5 657 aa21.86■■□□□ 1.09
HLA-DQB2-229ENST00000411527 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.86■■□□□ 1.09
HLA-DQB2-229ENST00000411527 PIK3R4Q99570 1358 aa21.86■■□□□ 1.09
HLA-DQB2-229ENST00000411527 COL16A1Q07092 1604 aaPredicted RBP21.85■■□□□ 1.09
HLA-DQB2-229ENST00000411527 ATF3P18847 181 aa21.85■■□□□ 1.09
HLA-DQB2-229ENST00000411527 CADPS2Q86UW7 1296 aa21.85■■□□□ 1.09
HLA-DQB2-229ENST00000411527 AMOTL2Q9Y2J4 779 aa21.84■■□□□ 1.09
HLA-DQB2-229ENST00000411527 TRPM2O94759 1503 aa21.82■■□□□ 1.08
HLA-DQB2-229ENST00000411527 PPARGC1BQ86YN6 1023 aaKnown RBP21.8■■□□□ 1.08
HLA-DQB2-229ENST00000411527 PTPRUQ92729 1446 aa21.8■■□□□ 1.08
HLA-DQB2-229ENST00000411527 SPATA31A6Q5VVP1 1343 aa21.8■■□□□ 1.08
HLA-DQB2-229ENST00000411527 MEX3CQ5U5Q3 659 aaKnown RBP21.78■■□□□ 1.08
HLA-DQB2-229ENST00000411527 SETD1AO15047 1707 aaKnown RBP21.77■■□□□ 1.08
HLA-DQB2-229ENST00000411527 AHDC1Q5TGY3 1603 aaPredicted RBP21.77■■□□□ 1.08
HLA-DQB2-229ENST00000411527 LRP6O75581 1613 aa21.77■■□□□ 1.07
HLA-DQB2-229ENST00000411527 SPHKAPQ2M3C7 1700 aa21.76■■□□□ 1.07
HLA-DQB2-229ENST00000411527 ZNF326Q5BKZ1 582 aaKnown RBP21.76■■□□□ 1.07
HLA-DQB2-229ENST00000411527 BRINP3Q76B58 766 aa21.75■■□□□ 1.07
HLA-DQB2-229ENST00000411527 NRXN3Q9Y4C0 1643 aa21.74■■□□□ 1.07
HLA-DQB2-229ENST00000411527 SHPRHQ149N8 1683 aa21.74■■□□□ 1.07
HLA-DQB2-229ENST00000411527 ZNF772Q68DY9 489 aaPredicted RBP21.73■■□□□ 1.07
HLA-DQB2-229ENST00000411527 SETBP1Q9Y6X0 1596 aa21.72■■□□□ 1.07
HLA-DQB2-229ENST00000411527 XRN1Q8IZH2 1706 aaKnown RBP21.72■■□□□ 1.07
HLA-DQB2-229ENST00000411527 DCCP43146 1447 aa21.71■■□□□ 1.07
HLA-DQB2-229ENST00000411527 NUTM2BA6NNL0 878 aaPredicted RBP21.7■■□□□ 1.06
HLA-DQB2-229ENST00000411527 NUTM2EB1AL46 878 aaPredicted RBP21.7■■□□□ 1.06
HLA-DQB2-229ENST00000411527 NUTM2AQ8IVF1 878 aaPredicted RBP21.7■■□□□ 1.06
HLA-DQB2-229ENST00000411527 METP08581 1390 aa21.69■■□□□ 1.06
HLA-DQB2-229ENST00000411527 TRIM52Q96A61 297 aa21.68■■□□□ 1.06
HLA-DQB2-229ENST00000411527 ASXL1Q8IXJ9 1541 aa21.66■■□□□ 1.06
HLA-DQB2-229ENST00000411527 MST1RQ04912 1400 aa21.66■■□□□ 1.06
HLA-DQB2-229ENST00000411527 CLTCL1P53675 1640 aa21.66■■□□□ 1.06
HLA-DQB2-229ENST00000411527 KIF1BO60333 1816 aa21.64■■□□□ 1.05
HLA-DQB2-229ENST00000411527 NHSL1Q5SYE7 1610 aa21.63■■□□□ 1.05
HLA-DQB2-229ENST00000411527 RXRBP28702 533 aa21.63■■□□□ 1.05
HLA-DQB2-229ENST00000411527 LRRC59Q96AG4 307 aaKnown RBP21.63■■□□□ 1.05
HLA-DQB2-229ENST00000411527 NEXMIFQ5QGS0 1516 aa21.63■■□□□ 1.05
HLA-DQB2-229ENST00000411527 SETD5Q9C0A6 1442 aa21.63■■□□□ 1.05
HLA-DQB2-229ENST00000411527 ADGRL3Q9HAR2 1447 aa21.62■■□□□ 1.05
HLA-DQB2-229ENST00000411527 DDX17Q92841 729 aaKnown RBP21.61■■□□□ 1.05
HLA-DQB2-229ENST00000411527 UPF1Q92900 1129 aaKnown RBP eCLIP21.61■■□□□ 1.05
HLA-DQB2-229ENST00000411527 NALCNQ8IZF0 1738 aa21.6■■□□□ 1.05
HLA-DQB2-229ENST00000411527 AFF2P51816 1311 aa21.59■■□□□ 1.05
HLA-DQB2-229ENST00000411527 NAIPQ13075 1403 aa21.58■■□□□ 1.05
HLA-DQB2-229ENST00000411527 VGFO15240 615 aaPredicted RBP21.56■■□□□ 1.04
HLA-DQB2-229ENST00000411527 RRBP1Q9P2E9 1410 aaKnown RBP21.55■■□□□ 1.04
HLA-DQB2-229ENST00000411527 C8orf37Q96NL8 207 aa21.55■■□□□ 1.04
HLA-DQB2-229ENST00000411527 PNPLA6Q8IY17 1366 aa21.55■■□□□ 1.04
HLA-DQB2-229ENST00000411527 CDK12Q9NYV4 1490 aaPredicted RBP21.53■■□□□ 1.04
HLA-DQB2-229ENST00000411527 C1orf167Q5SNV9 1468 aa21.52■■□□□ 1.04
HLA-DQB2-229ENST00000411527 QTRT2Q9H974 415 aaKnown RBP21.52■■□□□ 1.04
HLA-DQB2-229ENST00000411527 ROBO2Q9HCK4 1378 aa21.51■■□□□ 1.03
HLA-DQB2-229ENST00000411527 PTCH1Q13635 1447 aa21.5■■□□□ 1.03
HLA-DQB2-229ENST00000411527 ORAI2Q96SN7 254 aa21.5■■□□□ 1.03
HLA-DQB2-229ENST00000411527 SLC4A1APQ9BWU0 796 aaKnown RBP21.5■■□□□ 1.03
HLA-DQB2-229ENST00000411527 RPGRIP1LQ68CZ1 1315 aa21.5■■□□□ 1.03
HLA-DQB2-229ENST00000411527 ADAMTS2O95450 1211 aa21.49■■□□□ 1.03
HLA-DQB2-229ENST00000411527 NGLY1Q96IV0 654 aa21.49■■□□□ 1.03
HLA-DQB2-229ENST00000411527 RBM6P78332 1123 aaKnown RBP21.48■■□□□ 1.03
HLA-DQB2-229ENST00000411527 LAMC1P11047 1609 aa21.47■■□□□ 1.03
HLA-DQB2-229ENST00000411527 PPLO60437 1756 aa21.46■■□□□ 1.03
HLA-DQB2-229ENST00000411527 SOS2Q07890 1332 aaPredicted RBP21.46■■□□□ 1.03
HLA-DQB2-229ENST00000411527 HFM1A2PYH4 1435 aa21.46■■□□□ 1.03
HLA-DQB2-229ENST00000411527 RGS12O14924 1447 aa21.44■■□□□ 1.02
HLA-DQB2-229ENST00000411527 PRAG1Q86YV5 1406 aa21.42■■□□□ 1.02
HLA-DQB2-229ENST00000411527 FOXD1Q16676 465 aa21.41■■□□□ 1.02
HLA-DQB2-229ENST00000411527 USP21Q9UK80 565 aa21.4■■□□□ 1.02
HLA-DQB2-229ENST00000411527 ESCO1Q5FWF5 840 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms