RNA–Protein interactions for RNA: ENST00000410070.6

RIMKLA-201, Transcript of ribosomal modification protein rimK like family member A, humanhuman

TSL 3

Gene RIMKLA, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-201ENST00000410070 PHF23Q9BUL5 403 aaPredicted RBP35.17■■■■□ 3.22
RIMKLA-201ENST00000410070 TMEM131LA2VDJ0 1609 aa35.16■■■■□ 3.22
RIMKLA-201ENST00000410070 ROCK1Q13464 1354 aa35.15■■■■□ 3.22
RIMKLA-201ENST00000410070 PLEKHG1Q9ULL1 1385 aa35.15■■■■□ 3.22
RIMKLA-201ENST00000410070 PROSER2Q86WR7 435 aaPredicted RBP35.15■■■■□ 3.22
RIMKLA-201ENST00000410070 GCC2Q8IWJ2 1684 aa35.14■■■■□ 3.22
RIMKLA-201ENST00000410070 MYO5BQ9ULV0 1848 aa35.13■■■■□ 3.21
RIMKLA-201ENST00000410070 RBM33Q96EV2 1170 aaKnown RBP35.12■■■■□ 3.21
RIMKLA-201ENST00000410070 RGS17Q9UGC6 210 aaPredicted RBP35.12■■■■□ 3.21
RIMKLA-201ENST00000410070 RIMS2Q9UQ26 1411 aa35.12■■■■□ 3.21
RIMKLA-201ENST00000410070 E9PCH4 1651 aa35.08■■■■□ 3.21
RIMKLA-201ENST00000410070 ROBO1Q9Y6N7 1651 aa35.07■■■■□ 3.2
RIMKLA-201ENST00000410070 CHD2O14647 1828 aaKnown RBP35.06■■■■□ 3.2
RIMKLA-201ENST00000410070 TBX22Q9Y458 520 aa35.05■■■■□ 3.2
RIMKLA-201ENST00000410070 IQGAP3Q86VI3 1631 aa35.05■■■■□ 3.2
RIMKLA-201ENST00000410070 HDGFP51858 240 aaKnown RBP35.04■■■■□ 3.2
RIMKLA-201ENST00000410070 ADAMTS13Q76LX8 1427 aa35.01■■■■□ 3.2
RIMKLA-201ENST00000410070 BCANQ96GW7 911 aa35.01■■■■□ 3.2
RIMKLA-201ENST00000410070 MSH6P52701 1360 aa35■■■■□ 3.19
RIMKLA-201ENST00000410070 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.99■■■■□ 3.19
RIMKLA-201ENST00000410070 SLAIN2Q9P270 581 aa34.98■■■■□ 3.19
RIMKLA-201ENST00000410070 NCOA3Q9Y6Q9 1424 aa34.98■■■■□ 3.19
RIMKLA-201ENST00000410070 PPP1R15AO75807 674 aaPredicted RBP34.97■■■■□ 3.19
RIMKLA-201ENST00000410070 NUP155O75694 1391 aa34.94■■■■□ 3.18
RIMKLA-201ENST00000410070 PIK3R4Q99570 1358 aa34.92■■■■□ 3.18
RIMKLA-201ENST00000410070 DIP2AQ14689 1571 aa34.91■■■■□ 3.18
RIMKLA-201ENST00000410070 CHGAP10645 457 aaKnown RBP34.9■■■■□ 3.18
RIMKLA-201ENST00000410070 NUTM2DQ5VT03 806 aaPredicted RBP34.88■■■■□ 3.17
RIMKLA-201ENST00000410070 POTEAQ6S8J7 498 aa34.84■■■■□ 3.17
RIMKLA-201ENST00000410070 PHLPP1O60346 1717 aa34.82■■■■□ 3.16
RIMKLA-201ENST00000410070 PTPRUQ92729 1446 aa34.81■■■■□ 3.16
RIMKLA-201ENST00000410070 COL16A1Q07092 1604 aaPredicted RBP34.81■■■■□ 3.16
RIMKLA-201ENST00000410070 JCADQ9P266 1359 aa34.8■■■■□ 3.16
RIMKLA-201ENST00000410070 ITGAEP38570 1179 aa34.8■■■■□ 3.16
RIMKLA-201ENST00000410070 C19orf44Q9H6X5 657 aa34.79■■■■□ 3.16
RIMKLA-201ENST00000410070 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.78■■■■□ 3.16
RIMKLA-201ENST00000410070 TRPM2O94759 1503 aa34.78■■■■□ 3.16
RIMKLA-201ENST00000410070 NRXN3Q9Y4C0 1643 aa34.76■■■■□ 3.15
RIMKLA-201ENST00000410070 CADPS2Q86UW7 1296 aa34.75■■■■□ 3.15
RIMKLA-201ENST00000410070 AMOTL2Q9Y2J4 779 aa34.75■■■■□ 3.15
RIMKLA-201ENST00000410070 PPARGC1BQ86YN6 1023 aaKnown RBP34.74■■■■□ 3.15
RIMKLA-201ENST00000410070 SPHKAPQ2M3C7 1700 aa34.74■■■■□ 3.15
RIMKLA-201ENST00000410070 SETBP1Q9Y6X0 1596 aa34.74■■■■□ 3.15
RIMKLA-201ENST00000410070 AHDC1Q5TGY3 1603 aaPredicted RBP34.72■■■■□ 3.15
RIMKLA-201ENST00000410070 XRN1Q8IZH2 1706 aaKnown RBP34.69■■■■□ 3.14
RIMKLA-201ENST00000410070 C14orf37Q86TY3 774 aa34.69■■■■□ 3.14
RIMKLA-201ENST00000410070 ATF3P18847 181 aa34.68■■■■□ 3.14
RIMKLA-201ENST00000410070 RRBP1Q9P2E9 1410 aaKnown RBP34.67■■■■□ 3.14
RIMKLA-201ENST00000410070 DCCP43146 1447 aa34.66■■■■□ 3.14
RIMKLA-201ENST00000410070 LRP6O75581 1613 aa34.65■■■■□ 3.14
RIMKLA-201ENST00000410070 SPATA31A6Q5VVP1 1343 aa34.64■■■■□ 3.14
RIMKLA-201ENST00000410070 METP08581 1390 aa34.63■■■■□ 3.13
RIMKLA-201ENST00000410070 BRINP3Q76B58 766 aa34.62■■■■□ 3.13
RIMKLA-201ENST00000410070 NAIPQ13075 1403 aa34.62■■■■□ 3.13
RIMKLA-201ENST00000410070 CLTCL1P53675 1640 aa34.61■■■■□ 3.13
RIMKLA-201ENST00000410070 NEXMIFQ5QGS0 1516 aa34.6■■■■□ 3.13
RIMKLA-201ENST00000410070 SHPRHQ149N8 1683 aa34.59■■■■□ 3.13
RIMKLA-201ENST00000410070 ZNF326Q5BKZ1 582 aaKnown RBP34.57■■■■□ 3.12
RIMKLA-201ENST00000410070 MST1RQ04912 1400 aa34.55■■■■□ 3.12
RIMKLA-201ENST00000410070 ASXL1Q8IXJ9 1541 aa34.52■■■■□ 3.12
RIMKLA-201ENST00000410070 SETD5Q9C0A6 1442 aa34.49■■■■□ 3.11
RIMKLA-201ENST00000410070 ADGRL3Q9HAR2 1447 aa34.49■■■■□ 3.11
RIMKLA-201ENST00000410070 NHSL1Q5SYE7 1610 aa34.46■■■■□ 3.11
RIMKLA-201ENST00000410070 HFM1A2PYH4 1435 aa34.46■■■■□ 3.11
RIMKLA-201ENST00000410070 SETD1AO15047 1707 aaKnown RBP34.45■■■■□ 3.11
RIMKLA-201ENST00000410070 KIF1BO60333 1816 aa34.44■■■■□ 3.1
RIMKLA-201ENST00000410070 ZNF772Q68DY9 489 aaPredicted RBP34.43■■■■□ 3.1
RIMKLA-201ENST00000410070 NALCNQ8IZF0 1738 aa34.42■■■■□ 3.1
RIMKLA-201ENST00000410070 PRAG1Q86YV5 1406 aa34.41■■■■□ 3.1
RIMKLA-201ENST00000410070 MEX3CQ5U5Q3 659 aaKnown RBP34.4■■■■□ 3.1
RIMKLA-201ENST00000410070 PTCH1Q13635 1447 aa34.39■■■■□ 3.1
RIMKLA-201ENST00000410070 VGFO15240 615 aaPredicted RBP34.37■■■■□ 3.09
RIMKLA-201ENST00000410070 LRRC59Q96AG4 307 aaKnown RBP34.36■■■■□ 3.09
RIMKLA-201ENST00000410070 RPGRIP1LQ68CZ1 1315 aa34.35■■■■□ 3.09
RIMKLA-201ENST00000410070 ROBO2Q9HCK4 1378 aa34.35■■■■□ 3.09
RIMKLA-201ENST00000410070 C1orf167Q5SNV9 1468 aa34.33■■■■□ 3.09
RIMKLA-201ENST00000410070 DDX17Q92841 729 aaKnown RBP34.33■■■■□ 3.09
RIMKLA-201ENST00000410070 TRIM52Q96A61 297 aa34.32■■■■□ 3.08
RIMKLA-201ENST00000410070 LAMC1P11047 1609 aa34.32■■■■□ 3.08
RIMKLA-201ENST00000410070 NUTM2BA6NNL0 878 aaPredicted RBP34.31■■■■□ 3.08
RIMKLA-201ENST00000410070 NUTM2EB1AL46 878 aaPredicted RBP34.31■■■■□ 3.08
RIMKLA-201ENST00000410070 NUTM2AQ8IVF1 878 aaPredicted RBP34.31■■■■□ 3.08
RIMKLA-201ENST00000410070 PNPLA6Q8IY17 1366 aa34.31■■■■□ 3.08
RIMKLA-201ENST00000410070 SLC4A1APQ9BWU0 796 aaKnown RBP34.3■■■■□ 3.08
RIMKLA-201ENST00000410070 CDK12Q9NYV4 1490 aaPredicted RBP34.27■■■■□ 3.08
RIMKLA-201ENST00000410070 PPLO60437 1756 aa34.27■■■■□ 3.08
RIMKLA-201ENST00000410070 RXRBP28702 533 aa34.26■■■■□ 3.08
RIMKLA-201ENST00000410070 AFF2P51816 1311 aa34.26■■■■□ 3.07
RIMKLA-201ENST00000410070 UPF1Q92900 1129 aaKnown RBP eCLIP34.25■■■■□ 3.07
RIMKLA-201ENST00000410070 SOS2Q07890 1332 aaPredicted RBP34.23■■■■□ 3.07
RIMKLA-201ENST00000410070 ORAI2Q96SN7 254 aa34.21■■■■□ 3.07
RIMKLA-201ENST00000410070 FOXD1Q16676 465 aa34.17■■■■□ 3.06
RIMKLA-201ENST00000410070 SPATA31E1Q6ZUB1 1445 aa34.16■■■■□ 3.06
RIMKLA-201ENST00000410070 ADGRF5Q8IZF2 1346 aa34.14■■■■□ 3.06
RIMKLA-201ENST00000410070 C8orf37Q96NL8 207 aa34.13■■■■□ 3.05
RIMKLA-201ENST00000410070 QTRT2Q9H974 415 aaKnown RBP34.1■■■■□ 3.05
RIMKLA-201ENST00000410070 TECPR2O15040 1411 aa34.1■■■■□ 3.05
RIMKLA-201ENST00000410070 CDC42BPGQ6DT37 1551 aa34.1■■■■□ 3.05
RIMKLA-201ENST00000410070 CCDC144AA2RUR9 1427 aa34.09■■■■□ 3.05
RIMKLA-201ENST00000410070 RGS12O14924 1447 aa34.08■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms