RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 SENP3Q9H4L4 574 aaPredicted RBP26.67■■□□□ 1.86
LSM5-204ENST00000409909 HDGFP51858 240 aaKnown RBP26.65■■□□□ 1.86
LSM5-204ENST00000409909 PLEKHG1Q9ULL1 1385 aa26.65■■□□□ 1.86
LSM5-204ENST00000409909 TOM1O60784 492 aa26.64■■□□□ 1.86
LSM5-204ENST00000409909 NUTM2DQ5VT03 806 aaPredicted RBP26.64■■□□□ 1.86
LSM5-204ENST00000409909 BCANQ96GW7 911 aa26.64■■□□□ 1.86
LSM5-204ENST00000409909 PPP1R15AO75807 674 aaPredicted RBP26.63■■□□□ 1.85
LSM5-204ENST00000409909 ALKQ9UM73 1620 aa26.63■■□□□ 1.85
LSM5-204ENST00000409909 KCNA6P17658 529 aa26.62■■□□□ 1.85
LSM5-204ENST00000409909 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.62■■□□□ 1.85
LSM5-204ENST00000409909 PIP4K2BP78356 416 aa26.61■■□□□ 1.85
LSM5-204ENST00000409909 XIRP1Q702N8 1843 aaKnown RBP26.59■■□□□ 1.85
LSM5-204ENST00000409909 SLC4A1APQ9BWU0 796 aaKnown RBP26.58■■□□□ 1.85
LSM5-204ENST00000409909 TRPM2O94759 1503 aa26.58■■□□□ 1.85
LSM5-204ENST00000409909 SCAF1Q9H7N4 1312 aaKnown RBP26.58■■□□□ 1.85
LSM5-204ENST00000409909 CLTCL1P53675 1640 aa26.57■■□□□ 1.84
LSM5-204ENST00000409909 TBX22Q9Y458 520 aa26.55■■□□□ 1.84
LSM5-204ENST00000409909 ADAMTS13Q76LX8 1427 aa26.54■■□□□ 1.84
LSM5-204ENST00000409909 NWD1Q149M9 1564 aa26.54■■□□□ 1.84
LSM5-204ENST00000409909 TMEM94Q12767 1356 aa26.53■■□□□ 1.84
LSM5-204ENST00000409909 PROSER2Q86WR7 435 aaPredicted RBP26.52■■□□□ 1.84
LSM5-204ENST00000409909 RBM33Q96EV2 1170 aaKnown RBP26.52■■□□□ 1.84
LSM5-204ENST00000409909 HSPA1LP34931 641 aa26.51■■□□□ 1.83
LSM5-204ENST00000409909 ZNF326Q5BKZ1 582 aaKnown RBP26.51■■□□□ 1.83
LSM5-204ENST00000409909 CHD2O14647 1828 aaKnown RBP26.51■■□□□ 1.83
LSM5-204ENST00000409909 FOXD1Q16676 465 aa26.49■■□□□ 1.83
LSM5-204ENST00000409909 NKTRP30414 1462 aaKnown RBP26.49■■□□□ 1.83
LSM5-204ENST00000409909 KIF1BO60333 1816 aa26.46■■□□□ 1.83
LSM5-204ENST00000409909 MPHOSPH9Q99550 1183 aa26.46■■□□□ 1.83
LSM5-204ENST00000409909 DIP2AQ14689 1571 aa26.46■■□□□ 1.83
LSM5-204ENST00000409909 SETD5Q9C0A6 1442 aa26.45■■□□□ 1.82
LSM5-204ENST00000409909 NEXMIFQ5QGS0 1516 aa26.44■■□□□ 1.82
LSM5-204ENST00000409909 NRXN3Q9Y4C0 1643 aa26.43■■□□□ 1.82
LSM5-204ENST00000409909 PIK3R4Q99570 1358 aa26.42■■□□□ 1.82
LSM5-204ENST00000409909 SETBP1Q9Y6X0 1596 aa26.41■■□□□ 1.82
LSM5-204ENST00000409909 PTPRUQ92729 1446 aa26.39■■□□□ 1.82
LSM5-204ENST00000409909 DISP3Q9P2K9 1392 aa26.37■■□□□ 1.81
LSM5-204ENST00000409909 AMOTL2Q9Y2J4 779 aa26.37■■□□□ 1.81
LSM5-204ENST00000409909 RAB3GAP2Q9H2M9 1393 aa26.36■■□□□ 1.81
LSM5-204ENST00000409909 METP08581 1390 aa26.35■■□□□ 1.81
LSM5-204ENST00000409909 MSH6P52701 1360 aa26.34■■□□□ 1.81
LSM5-204ENST00000409909 RPGRIP1LQ68CZ1 1315 aa26.34■■□□□ 1.81
LSM5-204ENST00000409909 ACIN1Q9UKV3 1341 aaKnown RBP26.34■■□□□ 1.81
LSM5-204ENST00000409909 FAM135BQ49AJ0 1406 aa26.33■■□□□ 1.81
LSM5-204ENST00000409909 CCDC144AA2RUR9 1427 aa26.32■■□□□ 1.8
LSM5-204ENST00000409909 NCOA3Q9Y6Q9 1424 aa26.32■■□□□ 1.8
LSM5-204ENST00000409909 VGFO15240 615 aaPredicted RBP26.32■■□□□ 1.8
LSM5-204ENST00000409909 XRN1Q8IZH2 1706 aaKnown RBP26.29■■□□□ 1.8
LSM5-204ENST00000409909 PPLO60437 1756 aa26.29■■□□□ 1.8
LSM5-204ENST00000409909 SLAIN2Q9P270 581 aa26.28■■□□□ 1.8
LSM5-204ENST00000409909 SPATA31E1Q6ZUB1 1445 aa26.28■■□□□ 1.8
LSM5-204ENST00000409909 C14orf37Q86TY3 774 aa26.27■■□□□ 1.8
LSM5-204ENST00000409909 ROBO1Q9Y6N7 1651 aa26.26■■□□□ 1.79
LSM5-204ENST00000409909 RGL3Q3MIN7 710 aa26.26■■□□□ 1.79
LSM5-204ENST00000409909 C19orf44Q9H6X5 657 aa26.25■■□□□ 1.79
LSM5-204ENST00000409909 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.24■■□□□ 1.79
LSM5-204ENST00000409909 SETD1AO15047 1707 aaKnown RBP26.23■■□□□ 1.79
LSM5-204ENST00000409909 ILDR2Q71H61 639 aa26.22■■□□□ 1.79
LSM5-204ENST00000409909 ADGRF5Q8IZF2 1346 aa26.21■■□□□ 1.79
LSM5-204ENST00000409909 MED1Q15648 1581 aaPredicted RBP26.2■■□□□ 1.78
LSM5-204ENST00000409909 ATF3P18847 181 aa26.19■■□□□ 1.78
LSM5-204ENST00000409909 HRCP23327 699 aa26.19■■□□□ 1.78
LSM5-204ENST00000409909 CADPS2Q86UW7 1296 aa26.19■■□□□ 1.78
LSM5-204ENST00000409909 IFT172Q9UG01 1749 aa26.17■■□□□ 1.78
LSM5-204ENST00000409909 ANKRD30BQ9BXX2 1392 aa26.16■■□□□ 1.78
LSM5-204ENST00000409909 ROBO2Q9HCK4 1378 aa26.13■■□□□ 1.77
LSM5-204ENST00000409909 DCCP43146 1447 aa26.13■■□□□ 1.77
LSM5-204ENST00000409909 PTCH1Q13635 1447 aa26.11■■□□□ 1.77
LSM5-204ENST00000409909 ADGRL3Q9HAR2 1447 aa26.11■■□□□ 1.77
LSM5-204ENST00000409909 PRAG1Q86YV5 1406 aa26.1■■□□□ 1.77
LSM5-204ENST00000409909 PHLPP1O60346 1717 aa26.09■■□□□ 1.77
LSM5-204ENST00000409909 NALCNQ8IZF0 1738 aa26.08■■□□□ 1.77
LSM5-204ENST00000409909 PIK3C2GO75747 1445 aa26.08■■□□□ 1.77
LSM5-204ENST00000409909 MST1RQ04912 1400 aa26.07■■□□□ 1.76
LSM5-204ENST00000409909 BRINP3Q76B58 766 aa26.07■■□□□ 1.76
LSM5-204ENST00000409909 TMEM132EQ6IEE7 984 aa26.05■■□□□ 1.76
LSM5-204ENST00000409909 ASXL1Q8IXJ9 1541 aa26.04■■□□□ 1.76
LSM5-204ENST00000409909 COL16A1Q07092 1604 aaPredicted RBP26.03■■□□□ 1.76
LSM5-204ENST00000409909 STK26Q9P289 416 aa26.03■■□□□ 1.76
LSM5-204ENST00000409909 NRXN1Q9ULB1 1477 aa26.03■■□□□ 1.76
LSM5-204ENST00000409909 AHDC1Q5TGY3 1603 aaPredicted RBP26.02■■□□□ 1.76
LSM5-204ENST00000409909 LRPPRCP42704 1394 aaKnown RBP26.01■■□□□ 1.75
LSM5-204ENST00000409909 MYOM2P54296 1465 aa26.01■■□□□ 1.75
LSM5-204ENST00000409909 C14orf93Q9H972 538 aaKnown RBP26.01■■□□□ 1.75
LSM5-204ENST00000409909 PHF23Q9BUL5 403 aaPredicted RBP26■■□□□ 1.75
LSM5-204ENST00000409909 TECPR2O15040 1411 aa25.98■■□□□ 1.75
LSM5-204ENST00000409909 ABCC11Q96J66 1382 aa25.98■■□□□ 1.75
LSM5-204ENST00000409909 JCADQ9P266 1359 aa25.98■■□□□ 1.75
LSM5-204ENST00000409909 CFAP70Q5T0N1 1121 aa25.98■■□□□ 1.75
LSM5-204ENST00000409909 WAPLQ7Z5K2 1190 aa25.97■■□□□ 1.75
LSM5-204ENST00000409909 C1orf167Q5SNV9 1468 aa25.96■■□□□ 1.75
LSM5-204ENST00000409909 YTHDC2Q9H6S0 1430 aaKnown RBP25.96■■□□□ 1.75
LSM5-204ENST00000409909 RGS17Q9UGC6 210 aaPredicted RBP25.95■■□□□ 1.74
LSM5-204ENST00000409909 PLEKHH1Q9ULM0 1364 aa25.94■■□□□ 1.74
LSM5-204ENST00000409909 DCAF11Q8TEB1 546 aa25.93■■□□□ 1.74
LSM5-204ENST00000409909 DDX17Q92841 729 aaKnown RBP25.93■■□□□ 1.74
LSM5-204ENST00000409909 KNDC1Q76NI1 1749 aa25.93■■□□□ 1.74
LSM5-204ENST00000409909 SOCS7O14512 581 aa25.92■■□□□ 1.74
LSM5-204ENST00000409909 KDM2AQ9Y2K7 1162 aa25.92■■□□□ 1.74
LSM5-204ENST00000409909 NHSL1Q5SYE7 1610 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 277 ms