RNA–Protein interactions for RNA: ENST00000409825.5

TTC7A-204, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 4,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-204ENST00000409825 ZNF518AQ6AHZ1 1483 aa19.09■□□□□ 0.65
TTC7A-204ENST00000409825 CCDC146Q8IYE0 955 aa19.09■□□□□ 0.65
TTC7A-204ENST00000409825 PDE3BQ13370 1112 aa19.08■□□□□ 0.65
TTC7A-204ENST00000409825 NGEFQ8N5V2 710 aa19.08■□□□□ 0.65
TTC7A-204ENST00000409825 GGNBP2Q9H3C7 697 aa19.08■□□□□ 0.65
TTC7A-204ENST00000409825 FBXO31Q5XUX0 539 aaPredicted RBP19.08■□□□□ 0.64
TTC7A-204ENST00000409825 SMC4Q9NTJ3 1288 aa19.08■□□□□ 0.64
TTC7A-204ENST00000409825 KCNJ4P48050 445 aa19.08■□□□□ 0.64
TTC7A-204ENST00000409825 CDK19Q9BWU1 502 aa19.08■□□□□ 0.64
TTC7A-204ENST00000409825 THOC2Q8NI27 1593 aaKnown RBP19.07■□□□□ 0.64
TTC7A-204ENST00000409825 G3V3G9 751 aa19.07■□□□□ 0.64
TTC7A-204ENST00000409825 DCAF8Q5TAQ9 597 aa19.07■□□□□ 0.64
TTC7A-204ENST00000409825 IDI1Q13907 227 aa19.07■□□□□ 0.64
TTC7A-204ENST00000409825 TNRQ92752 1358 aa19.07■□□□□ 0.64
TTC7A-204ENST00000409825 NUTM2BA6NNL0 878 aaPredicted RBP19.06■□□□□ 0.64
TTC7A-204ENST00000409825 NUTM2EB1AL46 878 aaPredicted RBP19.06■□□□□ 0.64
TTC7A-204ENST00000409825 NUTM2AQ8IVF1 878 aaPredicted RBP19.06■□□□□ 0.64
TTC7A-204ENST00000409825 CHMP3Q9Y3E7 222 aa19.06■□□□□ 0.64
TTC7A-204ENST00000409825 GPATCH8Q9UKJ3 1502 aaKnown RBP19.05■□□□□ 0.64
TTC7A-204ENST00000409825 NUP153P49790 1475 aaKnown RBP19.05■□□□□ 0.64
TTC7A-204ENST00000409825 NCOA1Q15788 1441 aa19.05■□□□□ 0.64
TTC7A-204ENST00000409825 CFAP44Q96MT7 982 aa19.05■□□□□ 0.64
TTC7A-204ENST00000409825 NAIPQ13075 1403 aa19.05■□□□□ 0.64
TTC7A-204ENST00000409825 KIAA0556O60303 1618 aa19.05■□□□□ 0.64
TTC7A-204ENST00000409825 SF3B2Q13435 895 aaKnown RBP19.05■□□□□ 0.64
TTC7A-204ENST00000409825 PRDM11Q9NQV5 511 aa19.04■□□□□ 0.64
TTC7A-204ENST00000409825 ATAD2Q6PL18 1390 aa19.04■□□□□ 0.64
TTC7A-204ENST00000409825 HMMRO75330 724 aa19.04■□□□□ 0.64
TTC7A-204ENST00000409825 GORABQ5T7V8 394 aa19.04■□□□□ 0.64
TTC7A-204ENST00000409825 FGD1P98174 961 aa19.03■□□□□ 0.64
TTC7A-204ENST00000409825 PTPN23Q9H3S7 1636 aa19.03■□□□□ 0.64
TTC7A-204ENST00000409825 BECN1Q14457 450 aa19.02■□□□□ 0.64
TTC7A-204ENST00000409825 CCDC61Q9Y6R9 512 aa19.02■□□□□ 0.64
TTC7A-204ENST00000409825 NBPF1Q3BBV0 1214 aa19.02■□□□□ 0.64
TTC7A-204ENST00000409825 ITPRIPQ8IWB1 547 aa19.02■□□□□ 0.64
TTC7A-204ENST00000409825 ABCC10Q5T3U5 1492 aa19.01■□□□□ 0.63
TTC7A-204ENST00000409825 SMG6Q86US8 1419 aaKnown RBP19.01■□□□□ 0.63
TTC7A-204ENST00000409825 SLC4A10Q6U841 1118 aa19.01■□□□□ 0.63
TTC7A-204ENST00000409825 STRN4Q9NRL3 753 aa19.01■□□□□ 0.63
TTC7A-204ENST00000409825 A2MP01023 1474 aa19.01■□□□□ 0.63
TTC7A-204ENST00000409825 NEXNQ0ZGT2 675 aa19.01■□□□□ 0.63
TTC7A-204ENST00000409825 USP35Q9P2H5 1018 aa19■□□□□ 0.63
TTC7A-204ENST00000409825 RCAN3Q9UKA8 241 aa19■□□□□ 0.63
TTC7A-204ENST00000409825 ANP32BQ92688 251 aaKnown RBP19■□□□□ 0.63
TTC7A-204ENST00000409825 PRKRIP1Q9H875 184 aaPredicted RBP19■□□□□ 0.63
TTC7A-204ENST00000409825 CABP1Q9NZU7 370 aa19■□□□□ 0.63
TTC7A-204ENST00000409825 AMOTL2Q9Y2J4 779 aa19■□□□□ 0.63
TTC7A-204ENST00000409825 PPP4R2Q9NY27 417 aa18.99■□□□□ 0.63
TTC7A-204ENST00000409825 RRP7AQ9Y3A4 280 aaKnown RBP18.99■□□□□ 0.63
TTC7A-204ENST00000409825 HMGB2P26583 209 aaKnown RBP18.99■□□□□ 0.63
TTC7A-204ENST00000409825 RGS3P49796 1198 aa18.98■□□□□ 0.63
TTC7A-204ENST00000409825 KDM5BQ9UGL1 1544 aa18.98■□□□□ 0.63
TTC7A-204ENST00000409825 PLEKHO1Q53GL0 409 aaPredicted RBP18.98■□□□□ 0.63
TTC7A-204ENST00000409825 CADPS2Q86UW7 1296 aa18.97■□□□□ 0.63
TTC7A-204ENST00000409825 TATP17735 454 aaPredicted RBP18.97■□□□□ 0.63
TTC7A-204ENST00000409825 TOM1L2Q6ZVM7 507 aa18.97■□□□□ 0.63
TTC7A-204ENST00000409825 FAM135AQ9P2D6 1515 aa18.97■□□□□ 0.63
TTC7A-204ENST00000409825 DDX58O95786 925 aaKnown RBP18.96■□□□□ 0.63
TTC7A-204ENST00000409825 KIF7Q2M1P5 1343 aa18.96■□□□□ 0.63
TTC7A-204ENST00000409825 CCDC7Q96M83 1385 aa18.96■□□□□ 0.63
TTC7A-204ENST00000409825 GPATCH3Q96I76 525 aa18.95■□□□□ 0.62
TTC7A-204ENST00000409825 RWDD1Q9H446 243 aaPredicted RBP18.95■□□□□ 0.62
TTC7A-204ENST00000409825 GAS2L2Q8NHY3 880 aa18.95■□□□□ 0.62
TTC7A-204ENST00000409825 DCAF8L1A6NGE4 600 aa18.95■□□□□ 0.62
TTC7A-204ENST00000409825 TOM1O60784 492 aa18.95■□□□□ 0.62
TTC7A-204ENST00000409825 NUDT16Q96DE0 195 aaKnown RBP18.95■□□□□ 0.62
TTC7A-204ENST00000409825 CEP170Q5SW79 1584 aa18.94■□□□□ 0.62
TTC7A-204ENST00000409825 RIPK4P57078 832 aa18.94■□□□□ 0.62
TTC7A-204ENST00000409825 KCNH5Q8NCM2 988 aa18.94■□□□□ 0.62
TTC7A-204ENST00000409825 UHRF1BP1LA0JNW5 1464 aa18.94■□□□□ 0.62
TTC7A-204ENST00000409825 E9PSI1 815 aa18.94■□□□□ 0.62
TTC7A-204ENST00000409825 SLC12A5Q9H2X9 1139 aa18.94■□□□□ 0.62
TTC7A-204ENST00000409825 CTTNBP2Q8WZ74 1663 aa18.93■□□□□ 0.62
TTC7A-204ENST00000409825 WASHC2AQ641Q2 1341 aa18.93■□□□□ 0.62
TTC7A-204ENST00000409825 LRPPRCP42704 1394 aaKnown RBP18.93■□□□□ 0.62
TTC7A-204ENST00000409825 FRAT2O75474 233 aaPredicted RBP18.93■□□□□ 0.62
TTC7A-204ENST00000409825 RUNDC1Q96C34 613 aa18.92■□□□□ 0.62
TTC7A-204ENST00000409825 APBB1O00213 710 aa18.92■□□□□ 0.62
TTC7A-204ENST00000409825 EIF2S2P20042 333 aaKnown RBP18.92■□□□□ 0.62
TTC7A-204ENST00000409825 MCCP23508 829 aa18.92■□□□□ 0.62
TTC7A-204ENST00000409825 ELL2O00472 640 aaPredicted RBP18.91■□□□□ 0.62
TTC7A-204ENST00000409825 NCLP19338 710 aaKnown RBP18.91■□□□□ 0.62
TTC7A-204ENST00000409825 DDRGK1Q96HY6 314 aa18.91■□□□□ 0.62
TTC7A-204ENST00000409825 APAF1O14727 1248 aa18.91■□□□□ 0.62
TTC7A-204ENST00000409825 GNAI1P63096 354 aa18.91■□□□□ 0.62
TTC7A-204ENST00000409825 PHF8Q9UPP1 1060 aa18.91■□□□□ 0.62
TTC7A-204ENST00000409825 HMOX1P09601 288 aa18.9■□□□□ 0.62
TTC7A-204ENST00000409825 MTHFSP49914 203 aa18.9■□□□□ 0.62
TTC7A-204ENST00000409825 CNTLNQ9NXG0 1405 aa18.9■□□□□ 0.62
TTC7A-204ENST00000409825 ABCA5Q8WWZ7 1642 aa18.9■□□□□ 0.62
TTC7A-204ENST00000409825 PBRM1Q86U86 1689 aa18.89■□□□□ 0.62
TTC7A-204ENST00000409825 KIAA1211Q6ZU35 1233 aa18.89■□□□□ 0.61
TTC7A-204ENST00000409825 DUOX2Q9NRD8 1548 aa18.89■□□□□ 0.61
TTC7A-204ENST00000409825 TSPYL4Q9UJ04 414 aa18.88■□□□□ 0.61
TTC7A-204ENST00000409825 ISY1Q9ULR0 285 aaKnown RBP18.88■□□□□ 0.61
TTC7A-204ENST00000409825 MSH6P52701 1360 aa18.88■□□□□ 0.61
TTC7A-204ENST00000409825 WAPLQ7Z5K2 1190 aa18.87■□□□□ 0.61
TTC7A-204ENST00000409825 SPG7Q9UQ90 795 aa18.87■□□□□ 0.61
TTC7A-204ENST00000409825 TRAPPC8Q9Y2L5 1435 aa18.87■□□□□ 0.61
TTC7A-204ENST00000409825 ITSN2Q9NZM3 1697 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms