RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 CCDC73Q6ZRK6 1079 aa16.74■□□□□ 0.27
AFF3-202ENST00000409236 ROCK2O75116 1388 aaKnown RBP16.73■□□□□ 0.27
AFF3-202ENST00000409236 OFD1O75665 1012 aa16.73■□□□□ 0.27
AFF3-202ENST00000409236 ROCK1Q13464 1354 aa16.73■□□□□ 0.27
AFF3-202ENST00000409236 RNF20Q5VTR2 975 aa16.73■□□□□ 0.27
AFF3-202ENST00000409236 HDGFL2Q7Z4V5 671 aaPredicted RBP16.72■□□□□ 0.27
AFF3-202ENST00000409236 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.72■□□□□ 0.27
AFF3-202ENST00000409236 FEZ1Q99689 392 aa16.72■□□□□ 0.27
AFF3-202ENST00000409236 FAM107BQ9H098 131 aa16.71■□□□□ 0.27
AFF3-202ENST00000409236 SRPK2P78362 688 aaKnown RBP16.71■□□□□ 0.27
AFF3-202ENST00000409236 CPLX1O14810 134 aa16.71■□□□□ 0.26
AFF3-202ENST00000409236 SEPT11Q9NVA2 429 aaKnown RBP16.71■□□□□ 0.26
AFF3-202ENST00000409236 WWC1Q8IX03 1113 aa16.7■□□□□ 0.26
AFF3-202ENST00000409236 R3HCC1Q9Y3T6 440 aaKnown RBP16.7■□□□□ 0.26
AFF3-202ENST00000409236 CCAR1Q8IX12 1150 aaKnown RBP16.7■□□□□ 0.26
AFF3-202ENST00000409236 FHAD1B1AJZ9 1412 aa16.69■□□□□ 0.26
AFF3-202ENST00000409236 PIP4K2AP48426 406 aaPredicted RBP16.69■□□□□ 0.26
AFF3-202ENST00000409236 SAFBQ15424 915 aaKnown RBP eCLIP16.68■□□□□ 0.26
AFF3-202ENST00000409236 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
AFF3-202ENST00000409236 PLEKHD1A6NEE1 506 aa16.68■□□□□ 0.26
AFF3-202ENST00000409236 NOL10Q9BSC4 688 aaKnown RBP16.68■□□□□ 0.26
AFF3-202ENST00000409236 CHMP5Q9NZZ3 219 aa16.68■□□□□ 0.26
AFF3-202ENST00000409236 BRMS1Q9HCU9 246 aa16.68■□□□□ 0.26
AFF3-202ENST00000409236 TRIM34Q9BYJ4 488 aa16.68■□□□□ 0.26
AFF3-202ENST00000409236 SENP3Q9H4L4 574 aaPredicted RBP16.67■□□□□ 0.26
AFF3-202ENST00000409236 ZFYVE27Q5T4F4 411 aa16.67■□□□□ 0.26
AFF3-202ENST00000409236 CFDP1Q9UEE9 299 aaPredicted RBP16.67■□□□□ 0.26
AFF3-202ENST00000409236 CFAP57Q96MR6 1250 aa16.67■□□□□ 0.26
AFF3-202ENST00000409236 PPM1EQ8WY54 764 aa16.67■□□□□ 0.26
AFF3-202ENST00000409236 NF2P35240 595 aa16.67■□□□□ 0.26
AFF3-202ENST00000409236 KIF3BO15066 747 aa16.66■□□□□ 0.26
AFF3-202ENST00000409236 FRAT2O75474 233 aaPredicted RBP16.66■□□□□ 0.26
AFF3-202ENST00000409236 CCDC91Q7Z6B0 441 aa16.66■□□□□ 0.26
AFF3-202ENST00000409236 RBM33Q96EV2 1170 aaKnown RBP16.66■□□□□ 0.26
AFF3-202ENST00000409236 PABPN1Q86U42 306 aaKnown RBP eCLIP16.66■□□□□ 0.26
AFF3-202ENST00000409236 LRRCC1Q9C099 1032 aa16.66■□□□□ 0.26
AFF3-202ENST00000409236 GOLGA6L10A0A0M3HER8 536 aa16.65■□□□□ 0.26
AFF3-202ENST00000409236 U2AF1L5P0DN76 240 aaPredicted RBP16.65■□□□□ 0.26
AFF3-202ENST00000409236 U2AF1Q01081 240 aaKnown RBP eCLIP16.65■□□□□ 0.26
AFF3-202ENST00000409236 PDILTQ8N807 584 aa16.65■□□□□ 0.26
AFF3-202ENST00000409236 CTDP1Q9Y5B0 961 aaPredicted RBP16.64■□□□□ 0.25
AFF3-202ENST00000409236 PDCL2Q8N4E4 241 aa16.64■□□□□ 0.25
AFF3-202ENST00000409236 ZNHIT6Q9NWK9 470 aaKnown RBP16.63■□□□□ 0.25
AFF3-202ENST00000409236 TRDNQ13061 729 aa16.63■□□□□ 0.25
AFF3-202ENST00000409236 CCDC146Q8IYE0 955 aa16.63■□□□□ 0.25
AFF3-202ENST00000409236 ARHGAP35Q9NRY4 1499 aa16.63■□□□□ 0.25
AFF3-202ENST00000409236 MBD3O95983 291 aa16.63■□□□□ 0.25
AFF3-202ENST00000409236 PDE4AP27815 886 aa16.63■□□□□ 0.25
AFF3-202ENST00000409236 SYCP1Q15431 976 aa16.63■□□□□ 0.25
AFF3-202ENST00000409236 CEP63Q96MT8 703 aa16.63■□□□□ 0.25
AFF3-202ENST00000409236 RILPL2Q969X0 211 aa16.62■□□□□ 0.25
AFF3-202ENST00000409236 ERICH2A1L162 156 aa16.62■□□□□ 0.25
AFF3-202ENST00000409236 STAMBPO95630 424 aa16.62■□□□□ 0.25
AFF3-202ENST00000409236 FILIP1LQ4L180 1135 aa16.62■□□□□ 0.25
AFF3-202ENST00000409236 TRIM5Q9C035 493 aa16.61■□□□□ 0.25
AFF3-202ENST00000409236 MAGEC2Q9UBF1 373 aaPredicted RBP16.61■□□□□ 0.25
AFF3-202ENST00000409236 FOXD4L6Q3SYB3 417 aaPredicted RBP16.61■□□□□ 0.25
AFF3-202ENST00000409236 FOXD4L3Q6VB84 417 aaPredicted RBP16.61■□□□□ 0.25
AFF3-202ENST00000409236 ANKRD62A6NC57 917 aa16.61■□□□□ 0.25
AFF3-202ENST00000409236 ANO2Q9NQ90 1003 aa16.61■□□□□ 0.25
AFF3-202ENST00000409236 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.61■□□□□ 0.25
AFF3-202ENST00000409236 ABCC9O60706 1549 aa16.61■□□□□ 0.25
AFF3-202ENST00000409236 CCNB3Q8WWL7 1395 aa16.6■□□□□ 0.25
AFF3-202ENST00000409236 SHTN1A0MZ66 631 aa16.6■□□□□ 0.25
AFF3-202ENST00000409236 XBP1P17861 261 aa16.6■□□□□ 0.25
AFF3-202ENST00000409236 ZNF330Q9Y3S2 320 aaPredicted RBP16.6■□□□□ 0.25
AFF3-202ENST00000409236 KINO60870 393 aaKnown RBP16.6■□□□□ 0.25
AFF3-202ENST00000409236 CHMP7Q8WUX9 453 aaPredicted RBP16.6■□□□□ 0.25
AFF3-202ENST00000409236 SMC3Q9UQE7 1217 aa16.6■□□□□ 0.25
AFF3-202ENST00000409236 CALCOCO1Q9P1Z2 691 aa16.59■□□□□ 0.25
AFF3-202ENST00000409236 BCCIPQ9P287 314 aaKnown RBP eCLIP16.59■□□□□ 0.25
AFF3-202ENST00000409236 DCAF11Q8TEB1 546 aa16.59■□□□□ 0.25
AFF3-202ENST00000409236 CENPHQ9H3R5 247 aa16.59■□□□□ 0.25
AFF3-202ENST00000409236 MCM3P25205 808 aa16.59■□□□□ 0.25
AFF3-202ENST00000409236 TSPY26PQ9H489 355 aa16.58■□□□□ 0.25
AFF3-202ENST00000409236 KIF15Q9NS87 1388 aa16.58■□□□□ 0.25
AFF3-202ENST00000409236 SLC4A10Q6U841 1118 aa16.58■□□□□ 0.25
AFF3-202ENST00000409236 CCDC112Q8NEF3 446 aa16.58■□□□□ 0.25
AFF3-202ENST00000409236 CCDC181Q5TID7 509 aa16.58■□□□□ 0.24
AFF3-202ENST00000409236 LUZP1Q86V48 1076 aa16.58■□□□□ 0.24
AFF3-202ENST00000409236 NINLQ9Y2I6 1382 aa16.58■□□□□ 0.24
AFF3-202ENST00000409236 POLR3GO15318 223 aaPredicted RBP16.58■□□□□ 0.24
AFF3-202ENST00000409236 SMC2O95347 1197 aa16.58■□□□□ 0.24
AFF3-202ENST00000409236 RSPH4AQ5TD94 716 aa16.58■□□□□ 0.24
AFF3-202ENST00000409236 TXLNAP40222 546 aa16.58■□□□□ 0.24
AFF3-202ENST00000409236 MICALCLQ6ZW33 695 aa16.57■□□□□ 0.24
AFF3-202ENST00000409236 MAP9Q49MG5 647 aa16.57■□□□□ 0.24
AFF3-202ENST00000409236 AAMPQ13685 434 aa16.56■□□□□ 0.24
AFF3-202ENST00000409236 PDCP20941 246 aa16.56■□□□□ 0.24
AFF3-202ENST00000409236 INTS3Q68E01 1043 aaKnown RBP16.56■□□□□ 0.24
AFF3-202ENST00000409236 SETD5Q9C0A6 1442 aa16.56■□□□□ 0.24
AFF3-202ENST00000409236 NFXL1Q6ZNB6 911 aa16.55■□□□□ 0.24
AFF3-202ENST00000409236 ANKRD45Q5TZF3 282 aa16.55■□□□□ 0.24
AFF3-202ENST00000409236 VPS37CA5D8V6 355 aaPredicted RBP16.55■□□□□ 0.24
AFF3-202ENST00000409236 TTLL5Q6EMB2 1281 aa16.55■□□□□ 0.24
AFF3-202ENST00000409236 SKIDA1Q1XH10 827 aa16.54■□□□□ 0.24
AFF3-202ENST00000409236 DESP17661 470 aa16.54■□□□□ 0.24
AFF3-202ENST00000409236 TAX1BP1Q86VP1 789 aa16.54■□□□□ 0.24
AFF3-202ENST00000409236 UQCRHLA0A096LP55 91 aa16.54■□□□□ 0.24
AFF3-202ENST00000409236 UQCRHP07919 91 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms