RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 MS4A1P11836 297 aa4.87□□□□□ -1.63
RGPD4-201ENST00000408999 SUPT6HQ7KZ85 1726 aaKnown RBP4.87□□□□□ -1.63
RGPD4-201ENST00000408999 PRXQ9BXM0 1461 aa4.87□□□□□ -1.63
RGPD4-201ENST00000408999 GAS2L3Q86XJ1 694 aa4.86□□□□□ -1.63
RGPD4-201ENST00000408999 ZNF692Q9BU19 519 aaPredicted RBP4.86□□□□□ -1.63
RGPD4-201ENST00000408999 TIAM1Q13009 1591 aa4.86□□□□□ -1.63
RGPD4-201ENST00000408999 RGS3P49796 1198 aa4.86□□□□□ -1.63
RGPD4-201ENST00000408999 TSGA10IPQ3SY00 556 aa4.86□□□□□ -1.63
RGPD4-201ENST00000408999 RTF1Q92541 710 aaKnown RBP4.86□□□□□ -1.63
RGPD4-201ENST00000408999 COL17A1Q9UMD9 1497 aaPredicted RBP4.86□□□□□ -1.63
RGPD4-201ENST00000408999 KIF15Q9NS87 1388 aa4.86□□□□□ -1.63
RGPD4-201ENST00000408999 CHMP4BQ9H444 224 aaKnown RBP4.86□□□□□ -1.63
RGPD4-201ENST00000408999 ABCA5Q8WWZ7 1642 aa4.86□□□□□ -1.63
RGPD4-201ENST00000408999 OS9Q13438 667 aaPredicted RBP4.86□□□□□ -1.63
RGPD4-201ENST00000408999 BCL11BQ9C0K0 894 aaPredicted RBP4.86□□□□□ -1.63
RGPD4-201ENST00000408999 PCF11O94913 1555 aaKnown RBP4.86□□□□□ -1.63
RGPD4-201ENST00000408999 SLC4A3P48751 1232 aa4.86□□□□□ -1.63
RGPD4-201ENST00000408999 TRAK1Q9UPV9 953 aa4.85□□□□□ -1.63
RGPD4-201ENST00000408999 USP47Q96K76 1375 aa4.85□□□□□ -1.63
RGPD4-201ENST00000408999 ABCA10Q8WWZ4 1543 aa4.85□□□□□ -1.63
RGPD4-201ENST00000408999 U2AF1L5P0DN76 240 aaPredicted RBP4.85□□□□□ -1.63
RGPD4-201ENST00000408999 U2AF1Q01081 240 aaKnown RBP eCLIP4.85□□□□□ -1.63
RGPD4-201ENST00000408999 TERF2IPQ9NYB0 399 aa4.85□□□□□ -1.63
RGPD4-201ENST00000408999 C20orf194Q5TEA3 1177 aa4.85□□□□□ -1.63
RGPD4-201ENST00000408999 IQGAP2Q13576 1575 aa4.85□□□□□ -1.63
RGPD4-201ENST00000408999 RBM10P98175 930 aaKnown RBP4.85□□□□□ -1.63
RGPD4-201ENST00000408999 CCDC146Q8IYE0 955 aa4.85□□□□□ -1.63
RGPD4-201ENST00000408999 NPHP1O15259 732 aa4.84□□□□□ -1.63
RGPD4-201ENST00000408999 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.84□□□□□ -1.63
RGPD4-201ENST00000408999 DMRT2Q9Y5R5 561 aa4.84□□□□□ -1.63
RGPD4-201ENST00000408999 FAM69CQ0P6D2 419 aa4.84□□□□□ -1.63
RGPD4-201ENST00000408999 EIF5BO60841 1220 aaKnown RBP4.84□□□□□ -1.63
RGPD4-201ENST00000408999 CSB-PGBD3P0DP91 1061 aa4.84□□□□□ -1.63
RGPD4-201ENST00000408999 ST20-MTHFSA0A0A6YYL1 179 aa4.84□□□□□ -1.64
RGPD4-201ENST00000408999 ANKRD50Q9ULJ7 1429 aa4.84□□□□□ -1.64
RGPD4-201ENST00000408999 CDK13Q14004 1512 aaKnown RBP4.83□□□□□ -1.64
RGPD4-201ENST00000408999 DISP1Q96F81 1524 aa4.83□□□□□ -1.64
RGPD4-201ENST00000408999 MYBBP1AQ9BQG0 1328 aaKnown RBP4.83□□□□□ -1.64
RGPD4-201ENST00000408999 CALD1Q05682 793 aaKnown RBP4.83□□□□□ -1.64
RGPD4-201ENST00000408999 PANK3Q9H999 370 aa4.83□□□□□ -1.64
RGPD4-201ENST00000408999 RCAN3Q9UKA8 241 aa4.83□□□□□ -1.64
RGPD4-201ENST00000408999 NCLP19338 710 aaKnown RBP4.83□□□□□ -1.64
RGPD4-201ENST00000408999 ITPRIPQ8IWB1 547 aa4.83□□□□□ -1.64
RGPD4-201ENST00000408999 NGDNQ8NEJ9 315 aaKnown RBP4.83□□□□□ -1.64
RGPD4-201ENST00000408999 KIF21AQ7Z4S6 1674 aa4.82□□□□□ -1.64
RGPD4-201ENST00000408999 NUTM2FA1L443 756 aa4.82□□□□□ -1.64
RGPD4-201ENST00000408999 PRR29P0C7W0 189 aa4.82□□□□□ -1.64
RGPD4-201ENST00000408999 STAC3Q96MF2 364 aa4.82□□□□□ -1.64
RGPD4-201ENST00000408999 SPINK5Q9NQ38 1064 aaPredicted RBP4.82□□□□□ -1.64
RGPD4-201ENST00000408999 VGFO15240 615 aaPredicted RBP4.82□□□□□ -1.64
RGPD4-201ENST00000408999 EVC2Q86UK5 1308 aa4.82□□□□□ -1.64
RGPD4-201ENST00000408999 C9orf84Q5VXU9 1444 aa4.82□□□□□ -1.64
RGPD4-201ENST00000408999 GOLGA6L22H0YM25 854 aa4.82□□□□□ -1.64
RGPD4-201ENST00000408999 TPRNQ4KMQ1 711 aa4.82□□□□□ -1.64
RGPD4-201ENST00000408999 URB2Q14146 1524 aaKnown RBP4.81□□□□□ -1.64
RGPD4-201ENST00000408999 NLRP13Q86W25 1043 aa4.81□□□□□ -1.64
RGPD4-201ENST00000408999 PLEKHH2Q8IVE3 1493 aa4.81□□□□□ -1.64
RGPD4-201ENST00000408999 KIF14Q15058 1648 aa4.81□□□□□ -1.64
RGPD4-201ENST00000408999 SETD1BQ9UPS6 1966 aaKnown RBP4.81□□□□□ -1.64
RGPD4-201ENST00000408999 IPO8O15397 1037 aaKnown RBP4.81□□□□□ -1.64
RGPD4-201ENST00000408999 NBPF8Q3BBV2 869 aa4.81□□□□□ -1.64
RGPD4-201ENST00000408999 CHAMP1Q96JM3 812 aa4.81□□□□□ -1.64
RGPD4-201ENST00000408999 MINK1Q8N4C8 1332 aaPredicted RBP4.81□□□□□ -1.64
RGPD4-201ENST00000408999 DAPK1P53355 1430 aa4.81□□□□□ -1.64
RGPD4-201ENST00000408999 HSP90AB1P08238 724 aaKnown RBP4.81□□□□□ -1.64
RGPD4-201ENST00000408999 ZSCAN20P17040 1043 aaPredicted RBP4.81□□□□□ -1.64
RGPD4-201ENST00000408999 DDIT3P35638 169 aa4.81□□□□□ -1.64
RGPD4-201ENST00000408999 TRANK1O15050 2925 aa4.81□□□□□ -1.64
RGPD4-201ENST00000408999 EPRSP07814 1512 aaKnown RBP4.81□□□□□ -1.64
RGPD4-201ENST00000408999 KIAA0586Q9BVV6 1533 aa4.81□□□□□ -1.64
RGPD4-201ENST00000408999 TROQ12816 1431 aaPredicted RBP4.81□□□□□ -1.64
RGPD4-201ENST00000408999 CGNL1Q0VF96 1302 aa4.8□□□□□ -1.64
RGPD4-201ENST00000408999 AMPHP49418 695 aa4.8□□□□□ -1.64
RGPD4-201ENST00000408999 MIA2Q96PC5 1412 aa4.8□□□□□ -1.64
RGPD4-201ENST00000408999 PTPN23Q9H3S7 1636 aa4.8□□□□□ -1.64
RGPD4-201ENST00000408999 GOLGA2Q08379 1002 aa4.8□□□□□ -1.64
RGPD4-201ENST00000408999 RSPH6AQ9H0K4 717 aa4.8□□□□□ -1.64
RGPD4-201ENST00000408999 PPRC1Q5VV67 1664 aaKnown RBP4.8□□□□□ -1.64
RGPD4-201ENST00000408999 APBB1O00213 710 aa4.8□□□□□ -1.64
RGPD4-201ENST00000408999 LTV1Q96GA3 475 aaPredicted RBP4.8□□□□□ -1.64
RGPD4-201ENST00000408999 SMC4Q9NTJ3 1288 aa4.8□□□□□ -1.64
RGPD4-201ENST00000408999 NOP58Q9Y2X3 529 aaKnown RBP4.8□□□□□ -1.64
RGPD4-201ENST00000408999 DSPP15924 2871 aaKnown RBP4.8□□□□□ -1.64
RGPD4-201ENST00000408999 GRIN2AQ12879 1464 aa4.8□□□□□ -1.64
RGPD4-201ENST00000408999 SHROOM2Q13796 1616 aa4.8□□□□□ -1.64
RGPD4-201ENST00000408999 MAGI1Q96QZ7 1491 aaPredicted RBP4.79□□□□□ -1.64
RGPD4-201ENST00000408999 TAOK2Q9UL54 1235 aa4.79□□□□□ -1.64
RGPD4-201ENST00000408999 RRP7AQ9Y3A4 280 aaKnown RBP4.79□□□□□ -1.64
RGPD4-201ENST00000408999 THOC2Q8NI27 1593 aaKnown RBP4.79□□□□□ -1.64
RGPD4-201ENST00000408999 C8orf34Q49A92 452 aa4.79□□□□□ -1.64
RGPD4-201ENST00000408999 COG3Q96JB2 828 aa4.79□□□□□ -1.64
RGPD4-201ENST00000408999 CENPJQ9HC77 1338 aaPredicted RBP4.79□□□□□ -1.64
RGPD4-201ENST00000408999 CAMSAP2Q08AD1 1489 aa4.79□□□□□ -1.64
RGPD4-201ENST00000408999 KCNJ4P48050 445 aa4.79□□□□□ -1.64
RGPD4-201ENST00000408999 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.79□□□□□ -1.64
RGPD4-201ENST00000408999 BORCS6Q96GS4 357 aa4.79□□□□□ -1.64
RGPD4-201ENST00000408999 ZNF330Q9Y3S2 320 aaPredicted RBP4.79□□□□□ -1.64
RGPD4-201ENST00000408999 CNTLNQ9NXG0 1405 aa4.79□□□□□ -1.64
RGPD4-201ENST00000408999 FSD2A1L4K1 749 aa4.79□□□□□ -1.64
RGPD4-201ENST00000408999 LMOD3Q0VAK6 560 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms