RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 RIMS2Q9UQ26 1411 aa19.34■□□□□ 0.69
SNORD88B-201ENST00000408454 PIK3R4Q99570 1358 aa19.32■□□□□ 0.68
SNORD88B-201ENST00000408454 DIP2AQ14689 1571 aa19.32■□□□□ 0.68
SNORD88B-201ENST00000408454 PROSER2Q86WR7 435 aaPredicted RBP19.31■□□□□ 0.68
SNORD88B-201ENST00000408454 MSH6P52701 1360 aa19.31■□□□□ 0.68
SNORD88B-201ENST00000408454 TMEM131LA2VDJ0 1609 aa19.3■□□□□ 0.68
SNORD88B-201ENST00000408454 TBX22Q9Y458 520 aa19.3■□□□□ 0.68
SNORD88B-201ENST00000408454 NCOA3Q9Y6Q9 1424 aa19.3■□□□□ 0.68
SNORD88B-201ENST00000408454 E9PCH4 1651 aa19.3■□□□□ 0.68
SNORD88B-201ENST00000408454 ZFYVE9O95405 1425 aa19.29■□□□□ 0.68
SNORD88B-201ENST00000408454 SLC26A8Q96RN1 970 aa19.28■□□□□ 0.68
SNORD88B-201ENST00000408454 NWD1Q149M9 1564 aa19.27■□□□□ 0.67
SNORD88B-201ENST00000408454 HFM1A2PYH4 1435 aa19.26■□□□□ 0.67
SNORD88B-201ENST00000408454 HSPA1LP34931 641 aa19.26■□□□□ 0.67
SNORD88B-201ENST00000408454 PPARGC1BQ86YN6 1023 aaKnown RBP19.26■□□□□ 0.67
SNORD88B-201ENST00000408454 TMEM94Q12767 1356 aa19.26■□□□□ 0.67
SNORD88B-201ENST00000408454 ZNF326Q5BKZ1 582 aaKnown RBP19.24■□□□□ 0.67
SNORD88B-201ENST00000408454 NAIPQ13075 1403 aa19.24■□□□□ 0.67
SNORD88B-201ENST00000408454 FAM135BQ49AJ0 1406 aa19.24■□□□□ 0.67
SNORD88B-201ENST00000408454 SPHKAPQ2M3C7 1700 aa19.23■□□□□ 0.67
SNORD88B-201ENST00000408454 C14orf37Q86TY3 774 aa19.23■□□□□ 0.67
SNORD88B-201ENST00000408454 TRIM52Q96A61 297 aa19.23■□□□□ 0.67
SNORD88B-201ENST00000408454 PHF23Q9BUL5 403 aaPredicted RBP19.23■□□□□ 0.67
SNORD88B-201ENST00000408454 TRPM2O94759 1503 aa19.23■□□□□ 0.67
SNORD88B-201ENST00000408454 STRCP1A6NGW2 1772 aa19.22■□□□□ 0.67
SNORD88B-201ENST00000408454 CADPS2Q86UW7 1296 aa19.2■□□□□ 0.66
SNORD88B-201ENST00000408454 VGFO15240 615 aaPredicted RBP19.18■□□□□ 0.66
SNORD88B-201ENST00000408454 SLC4A1APQ9BWU0 796 aaKnown RBP19.18■□□□□ 0.66
SNORD88B-201ENST00000408454 ATF3P18847 181 aa19.17■□□□□ 0.66
SNORD88B-201ENST00000408454 RPGRIP1LQ68CZ1 1315 aa19.17■□□□□ 0.66
SNORD88B-201ENST00000408454 SOCS7O14512 581 aa19.16■□□□□ 0.66
SNORD88B-201ENST00000408454 C19orf44Q9H6X5 657 aa19.15■□□□□ 0.66
SNORD88B-201ENST00000408454 CHD2O14647 1828 aaKnown RBP19.15■□□□□ 0.66
SNORD88B-201ENST00000408454 MYO5BQ9ULV0 1848 aa19.15■□□□□ 0.66
SNORD88B-201ENST00000408454 MED1Q15648 1581 aaPredicted RBP19.15■□□□□ 0.66
SNORD88B-201ENST00000408454 SETBP1Q9Y6X0 1596 aa19.14■□□□□ 0.65
SNORD88B-201ENST00000408454 SLAIN2Q9P270 581 aa19.13■□□□□ 0.65
SNORD88B-201ENST00000408454 DCCP43146 1447 aa19.13■□□□□ 0.65
SNORD88B-201ENST00000408454 KIF1BO60333 1816 aa19.13■□□□□ 0.65
SNORD88B-201ENST00000408454 ADAMTS13Q76LX8 1427 aa19.12■□□□□ 0.65
SNORD88B-201ENST00000408454 ALKQ9UM73 1620 aa19.11■□□□□ 0.65
SNORD88B-201ENST00000408454 AMOTL2Q9Y2J4 779 aa19.1■□□□□ 0.65
SNORD88B-201ENST00000408454 XIRP1Q702N8 1843 aaKnown RBP19.09■□□□□ 0.65
SNORD88B-201ENST00000408454 CCDC144AA2RUR9 1427 aa19.08■□□□□ 0.65
SNORD88B-201ENST00000408454 ROBO1Q9Y6N7 1651 aa19.07■□□□□ 0.64
SNORD88B-201ENST00000408454 CLTCL1P53675 1640 aa19.07■□□□□ 0.64
SNORD88B-201ENST00000408454 NUTM2DQ5VT03 806 aaPredicted RBP19.06■□□□□ 0.64
SNORD88B-201ENST00000408454 JCADQ9P266 1359 aa19.05■□□□□ 0.64
SNORD88B-201ENST00000408454 NEXMIFQ5QGS0 1516 aa19.04■□□□□ 0.64
SNORD88B-201ENST00000408454 ANKRD30BQ9BXX2 1392 aa19.03■□□□□ 0.64
SNORD88B-201ENST00000408454 ILDR2Q71H61 639 aa19.02■□□□□ 0.64
SNORD88B-201ENST00000408454 SENP3Q9H4L4 574 aaPredicted RBP19.02■□□□□ 0.64
SNORD88B-201ENST00000408454 SPATA31A6Q5VVP1 1343 aa19■□□□□ 0.63
SNORD88B-201ENST00000408454 XRN1Q8IZH2 1706 aaKnown RBP19■□□□□ 0.63
SNORD88B-201ENST00000408454 PTCH1Q13635 1447 aa19■□□□□ 0.63
SNORD88B-201ENST00000408454 RBM33Q96EV2 1170 aaKnown RBP18.99■□□□□ 0.63
SNORD88B-201ENST00000408454 MPHOSPH9Q99550 1183 aa18.99■□□□□ 0.63
SNORD88B-201ENST00000408454 SETD5Q9C0A6 1442 aa18.99■□□□□ 0.63
SNORD88B-201ENST00000408454 PHLPP1O60346 1717 aa18.98■□□□□ 0.63
SNORD88B-201ENST00000408454 ADGRL3Q9HAR2 1447 aa18.98■□□□□ 0.63
SNORD88B-201ENST00000408454 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.97■□□□□ 0.63
SNORD88B-201ENST00000408454 PRAG1Q86YV5 1406 aa18.97■□□□□ 0.63
SNORD88B-201ENST00000408454 NRXN3Q9Y4C0 1643 aa18.96■□□□□ 0.63
SNORD88B-201ENST00000408454 AHDC1Q5TGY3 1603 aaPredicted RBP18.95■□□□□ 0.62
SNORD88B-201ENST00000408454 METP08581 1390 aa18.94■□□□□ 0.62
SNORD88B-201ENST00000408454 PTPRUQ92729 1446 aa18.93■□□□□ 0.62
SNORD88B-201ENST00000408454 MEX3CQ5U5Q3 659 aaKnown RBP18.93■□□□□ 0.62
SNORD88B-201ENST00000408454 STAC3Q96MF2 364 aa18.93■□□□□ 0.62
SNORD88B-201ENST00000408454 LRRC59Q96AG4 307 aaKnown RBP18.92■□□□□ 0.62
SNORD88B-201ENST00000408454 HRCP23327 699 aa18.9■□□□□ 0.62
SNORD88B-201ENST00000408454 PPLO60437 1756 aa18.9■□□□□ 0.62
SNORD88B-201ENST00000408454 ZNF772Q68DY9 489 aaPredicted RBP18.89■□□□□ 0.61
SNORD88B-201ENST00000408454 BRINP3Q76B58 766 aa18.89■□□□□ 0.61
SNORD88B-201ENST00000408454 MST1RQ04912 1400 aa18.88■□□□□ 0.61
SNORD88B-201ENST00000408454 ASXL1Q8IXJ9 1541 aa18.88■□□□□ 0.61
SNORD88B-201ENST00000408454 COL16A1Q07092 1604 aaPredicted RBP18.88■□□□□ 0.61
SNORD88B-201ENST00000408454 LRPPRCP42704 1394 aaKnown RBP18.87■□□□□ 0.61
SNORD88B-201ENST00000408454 RGL3Q3MIN7 710 aa18.87■□□□□ 0.61
SNORD88B-201ENST00000408454 SPATA31E1Q6ZUB1 1445 aa18.86■□□□□ 0.61
SNORD88B-201ENST00000408454 SHPRHQ149N8 1683 aa18.85■□□□□ 0.61
SNORD88B-201ENST00000408454 LAMC1P11047 1609 aa18.85■□□□□ 0.61
SNORD88B-201ENST00000408454 RAB3GAP2Q9H2M9 1393 aa18.83■□□□□ 0.61
SNORD88B-201ENST00000408454 TECPR2O15040 1411 aa18.83■□□□□ 0.6
SNORD88B-201ENST00000408454 DHX57Q6P158 1386 aaKnown RBP18.82■□□□□ 0.6
SNORD88B-201ENST00000408454 FOXD1Q16676 465 aa18.82■□□□□ 0.6
SNORD88B-201ENST00000408454 SIRT1Q96EB6 747 aa18.82■□□□□ 0.6
SNORD88B-201ENST00000408454 MYOM2P54296 1465 aa18.82■□□□□ 0.6
SNORD88B-201ENST00000408454 ABCC11Q96J66 1382 aa18.81■□□□□ 0.6
SNORD88B-201ENST00000408454 CDC42BPGQ6DT37 1551 aa18.81■□□□□ 0.6
SNORD88B-201ENST00000408454 NPHP3Q7Z494 1330 aa18.81■□□□□ 0.6
SNORD88B-201ENST00000408454 NALCNQ8IZF0 1738 aa18.81■□□□□ 0.6
SNORD88B-201ENST00000408454 PIK3C2GO75747 1445 aa18.81■□□□□ 0.6
SNORD88B-201ENST00000408454 ROBO2Q9HCK4 1378 aa18.81■□□□□ 0.6
SNORD88B-201ENST00000408454 SETD1AO15047 1707 aaKnown RBP18.8■□□□□ 0.6
SNORD88B-201ENST00000408454 C1orf167Q5SNV9 1468 aa18.8■□□□□ 0.6
SNORD88B-201ENST00000408454 NHSL1Q5SYE7 1610 aa18.8■□□□□ 0.6
SNORD88B-201ENST00000408454 IFT172Q9UG01 1749 aa18.78■□□□□ 0.6
SNORD88B-201ENST00000408454 ADGRF5Q8IZF2 1346 aa18.77■□□□□ 0.6
SNORD88B-201ENST00000408454 EIF3AQ14152 1382 aaKnown RBP18.77■□□□□ 0.6
SNORD88B-201ENST00000408454 KNDC1Q76NI1 1749 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms