RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 FSD2A1L4K1 749 aa11.18□□□□□ -0.62
PSEN1-205ENST00000406768 ERICH4A6NGS2 130 aa11.18□□□□□ -0.62
PSEN1-205ENST00000406768 IGSF3O75054 1194 aa11.18□□□□□ -0.62
PSEN1-205ENST00000406768 TEX35Q5T0J7 233 aa11.18□□□□□ -0.62
PSEN1-205ENST00000406768 STAC3Q96MF2 364 aa11.17□□□□□ -0.62
PSEN1-205ENST00000406768 PRDM4Q9UKN5 801 aa11.17□□□□□ -0.62
PSEN1-205ENST00000406768 CLUAP1Q96AJ1 413 aa11.17□□□□□ -0.62
PSEN1-205ENST00000406768 NUCB2P80303 420 aa11.17□□□□□ -0.62
PSEN1-205ENST00000406768 PRIMPOLQ96LW4 560 aa11.16□□□□□ -0.62
PSEN1-205ENST00000406768 CTTNBP2Q8WZ74 1663 aa11.16□□□□□ -0.62
PSEN1-205ENST00000406768 HS1BP3Q53T59 392 aa11.16□□□□□ -0.62
PSEN1-205ENST00000406768 EFCAB5A4FU69 1503 aa11.16□□□□□ -0.62
PSEN1-205ENST00000406768 MAPKBP1O60336 1514 aa11.16□□□□□ -0.62
PSEN1-205ENST00000406768 C20orf194Q5TEA3 1177 aa11.16□□□□□ -0.62
PSEN1-205ENST00000406768 ADAMTS12P58397 1594 aa11.16□□□□□ -0.62
PSEN1-205ENST00000406768 UACAQ9BZF9 1416 aa11.16□□□□□ -0.62
PSEN1-205ENST00000406768 MAGI1Q96QZ7 1491 aaPredicted RBP11.15□□□□□ -0.62
PSEN1-205ENST00000406768 ZKSCAN5Q9Y2L8 839 aa11.15□□□□□ -0.62
PSEN1-205ENST00000406768 EIF3AQ14152 1382 aaKnown RBP11.15□□□□□ -0.63
PSEN1-205ENST00000406768 GPS2Q13227 327 aa11.14□□□□□ -0.63
PSEN1-205ENST00000406768 TRERF1Q96PN7 1200 aa11.14□□□□□ -0.63
PSEN1-205ENST00000406768 TNPO1Q92973 898 aaKnown RBP11.14□□□□□ -0.63
PSEN1-205ENST00000406768 GTF2E1P29083 439 aaPredicted RBP11.14□□□□□ -0.63
PSEN1-205ENST00000406768 MPNDQ8N594 471 aa11.13□□□□□ -0.63
PSEN1-205ENST00000406768 KIF16BQ96L93 1317 aa11.13□□□□□ -0.63
PSEN1-205ENST00000406768 FOXD4L5Q5VV16 416 aaPredicted RBP11.13□□□□□ -0.63
PSEN1-205ENST00000406768 FOXD4L4Q8WXT5 416 aaPredicted RBP11.13□□□□□ -0.63
PSEN1-205ENST00000406768 CFAP44Q96MT7 982 aa11.13□□□□□ -0.63
PSEN1-205ENST00000406768 USP47Q96K76 1375 aa11.13□□□□□ -0.63
PSEN1-205ENST00000406768 ARID3CA6NKF2 412 aa11.13□□□□□ -0.63
PSEN1-205ENST00000406768 NRDCO43847 1150 aa11.13□□□□□ -0.63
PSEN1-205ENST00000406768 NOM1Q5C9Z4 860 aaKnown RBP11.13□□□□□ -0.63
PSEN1-205ENST00000406768 ZNF592Q92610 1267 aa11.13□□□□□ -0.63
PSEN1-205ENST00000406768 EIF4G3O43432 1585 aaKnown RBP11.12□□□□□ -0.63
PSEN1-205ENST00000406768 TBC1D32Q96NH3 1257 aa11.12□□□□□ -0.63
PSEN1-205ENST00000406768 NOL7Q9UMY1 257 aaKnown RBP11.12□□□□□ -0.63
PSEN1-205ENST00000406768 PATL2C9JE40 543 aaKnown RBP11.12□□□□□ -0.63
PSEN1-205ENST00000406768 RIPK4P57078 832 aa11.11□□□□□ -0.63
PSEN1-205ENST00000406768 CWC15Q9P013 229 aaKnown RBP11.11□□□□□ -0.63
PSEN1-205ENST00000406768 ERBB4Q15303 1308 aa11.11□□□□□ -0.63
PSEN1-205ENST00000406768 PRPF40AO75400 957 aaKnown RBP11.11□□□□□ -0.63
PSEN1-205ENST00000406768 BRD2P25440 801 aaKnown RBP11.11□□□□□ -0.63
PSEN1-205ENST00000406768 PDZRN3Q9UPQ7 1066 aa11.1□□□□□ -0.63
PSEN1-205ENST00000406768 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
PSEN1-205ENST00000406768 U2SURPO15042 1029 aaKnown RBP11.1□□□□□ -0.63
PSEN1-205ENST00000406768 TRIM34Q9BYJ4 488 aa11.1□□□□□ -0.63
PSEN1-205ENST00000406768 ST18O60284 1047 aa11.1□□□□□ -0.63
PSEN1-205ENST00000406768 MBD3O95983 291 aa11.09□□□□□ -0.63
PSEN1-205ENST00000406768 TSPY26PQ9H489 355 aa11.09□□□□□ -0.63
PSEN1-205ENST00000406768 TDRD9Q8NDG6 1382 aaKnown RBP11.09□□□□□ -0.63
PSEN1-205ENST00000406768 CCDC146Q8IYE0 955 aa11.09□□□□□ -0.63
PSEN1-205ENST00000406768 IFT57Q9NWB7 429 aa11.09□□□□□ -0.63
PSEN1-205ENST00000406768 ZNF777Q9ULD5 760 aaPredicted RBP11.09□□□□□ -0.63
PSEN1-205ENST00000406768 KLHL40Q2TBA0 621 aa11.09□□□□□ -0.63
PSEN1-205ENST00000406768 PANK1Q8TE04 598 aa11.09□□□□□ -0.63
PSEN1-205ENST00000406768 ST20-MTHFSA0A0A6YYL1 179 aa11.08□□□□□ -0.64
PSEN1-205ENST00000406768 TPM3P06753 285 aa11.08□□□□□ -0.64
PSEN1-205ENST00000406768 ITPRIPQ8IWB1 547 aa11.08□□□□□ -0.64
PSEN1-205ENST00000406768 NCOA1Q15788 1441 aa11.07□□□□□ -0.64
PSEN1-205ENST00000406768 FEZ1Q99689 392 aa11.07□□□□□ -0.64
PSEN1-205ENST00000406768 GOLGA6L4A6NEF3 574 aa11.07□□□□□ -0.64
PSEN1-205ENST00000406768 TMF1P82094 1093 aa11.07□□□□□ -0.64
PSEN1-205ENST00000406768 MYRIPQ8NFW9 859 aa11.07□□□□□ -0.64
PSEN1-205ENST00000406768 PPP1R9BQ96SB3 815 aa11.07□□□□□ -0.64
PSEN1-205ENST00000406768 ZNF500O60304 480 aaPredicted RBP11.06□□□□□ -0.64
PSEN1-205ENST00000406768 PDE3AQ14432 1141 aa11.06□□□□□ -0.64
PSEN1-205ENST00000406768 CCDC112Q8NEF3 446 aa11.06□□□□□ -0.64
PSEN1-205ENST00000406768 SYNJ2O15056 1496 aa11.06□□□□□ -0.64
PSEN1-205ENST00000406768 K7ELQ4 463 aaPredicted RBP11.06□□□□□ -0.64
PSEN1-205ENST00000406768 DEF6Q9H4E7 631 aa11.06□□□□□ -0.64
PSEN1-205ENST00000406768 SYCE3A1L190 88 aa11.05□□□□□ -0.64
PSEN1-205ENST00000406768 SEC24BO95487 1268 aa11.05□□□□□ -0.64
PSEN1-205ENST00000406768 CALRP27797 417 aaKnown RBP11.05□□□□□ -0.64
PSEN1-205ENST00000406768 GTF2A1P52655 376 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-205ENST00000406768 CDCA8Q53HL2 280 aa11.05□□□□□ -0.64
PSEN1-205ENST00000406768 MAP3K1Q13233 1512 aa11.05□□□□□ -0.64
PSEN1-205ENST00000406768 FOXD4L6Q3SYB3 417 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-205ENST00000406768 FOXD4L3Q6VB84 417 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-205ENST00000406768 AEBP2Q6ZN18 517 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-205ENST00000406768 ZFP91Q96JP5 570 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-205ENST00000406768 RGL3Q3MIN7 710 aa11.05□□□□□ -0.64
PSEN1-205ENST00000406768 KLHL34Q8N239 644 aa11.05□□□□□ -0.64
PSEN1-205ENST00000406768 CLGNO14967 610 aa11.04□□□□□ -0.64
PSEN1-205ENST00000406768 RBM25P49756 843 aaKnown RBP11.04□□□□□ -0.64
PSEN1-205ENST00000406768 BCL2L13Q9BXK5 485 aa11.04□□□□□ -0.64
PSEN1-205ENST00000406768 OGFRQ9NZT2 677 aa11.04□□□□□ -0.64
PSEN1-205ENST00000406768 NOLC1Q14978 699 aaKnown RBP eCLIP11.04□□□□□ -0.64
PSEN1-205ENST00000406768 ZRSR1Q15695 479 aaKnown RBP11.04□□□□□ -0.64
PSEN1-205ENST00000406768 AQRO60306 1485 aaKnown RBP eCLIP11.04□□□□□ -0.64
PSEN1-205ENST00000406768 BCAR3O75815 825 aa11.04□□□□□ -0.64
PSEN1-205ENST00000406768 NBPF8Q3BBV2 869 aa11.04□□□□□ -0.64
PSEN1-205ENST00000406768 GPATCH11Q8N954 259 aa11.04□□□□□ -0.64
PSEN1-205ENST00000406768 SSFA2P28290 1259 aa11.04□□□□□ -0.64
PSEN1-205ENST00000406768 SETQ01105 290 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-205ENST00000406768 GABPB1Q06547 395 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-205ENST00000406768 SNAPC4Q5SXM2 1469 aa11.03□□□□□ -0.64
PSEN1-205ENST00000406768 ARAP1Q96P48 1450 aa11.03□□□□□ -0.64
PSEN1-205ENST00000406768 CERS3Q8IU89 383 aa11.03□□□□□ -0.64
PSEN1-205ENST00000406768 ARGLU1Q9NWB6 273 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-205ENST00000406768 ADAMTS8Q9UP79 889 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms