RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 SLC4A3P48751 1232 aa16.42■□□□□ 0.22
CACNA1C-222ENST00000406454 CLSTN1O94985 981 aa16.42■□□□□ 0.22
CACNA1C-222ENST00000406454 GGNBP2Q9H3C7 697 aa16.42■□□□□ 0.22
CACNA1C-222ENST00000406454 TOMM22Q9NS69 142 aa16.42■□□□□ 0.22
CACNA1C-222ENST00000406454 GTF2E1P29083 439 aaPredicted RBP16.42■□□□□ 0.22
CACNA1C-222ENST00000406454 BRD4O60885 1362 aaPredicted RBP16.41■□□□□ 0.22
CACNA1C-222ENST00000406454 TTC5Q8N0Z6 440 aa16.41■□□□□ 0.22
CACNA1C-222ENST00000406454 SYNJ2O15056 1496 aa16.41■□□□□ 0.22
CACNA1C-222ENST00000406454 PRXQ9BXM0 1461 aa16.41■□□□□ 0.22
CACNA1C-222ENST00000406454 USP35Q9P2H5 1018 aa16.41■□□□□ 0.22
CACNA1C-222ENST00000406454 GNAI1P63096 354 aa16.41■□□□□ 0.22
CACNA1C-222ENST00000406454 NEXNQ0ZGT2 675 aa16.41■□□□□ 0.22
CACNA1C-222ENST00000406454 ARHGAP5Q13017 1502 aa16.41■□□□□ 0.22
CACNA1C-222ENST00000406454 TMEM132EQ6IEE7 984 aa16.4■□□□□ 0.22
CACNA1C-222ENST00000406454 PRM3Q9NNZ6 103 aa16.4■□□□□ 0.22
CACNA1C-222ENST00000406454 CABP2Q9NPB3 220 aa16.4■□□□□ 0.22
CACNA1C-222ENST00000406454 FOXD4L5Q5VV16 416 aaPredicted RBP16.4■□□□□ 0.22
CACNA1C-222ENST00000406454 FOXD4L4Q8WXT5 416 aaPredicted RBP16.4■□□□□ 0.22
CACNA1C-222ENST00000406454 PRG4Q92954 1404 aaPredicted RBP16.39■□□□□ 0.21
CACNA1C-222ENST00000406454 FRAT2O75474 233 aaPredicted RBP16.39■□□□□ 0.21
CACNA1C-222ENST00000406454 EFCAB5A4FU69 1503 aa16.38■□□□□ 0.21
CACNA1C-222ENST00000406454 CFAP70Q5T0N1 1121 aa16.38■□□□□ 0.21
CACNA1C-222ENST00000406454 PSME1Q06323 249 aa16.38■□□□□ 0.21
CACNA1C-222ENST00000406454 C9orf78Q9NZ63 289 aaPredicted RBP16.38■□□□□ 0.21
CACNA1C-222ENST00000406454 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
CACNA1C-222ENST00000406454 PRDM2Q13029 1718 aa16.38■□□□□ 0.21
CACNA1C-222ENST00000406454 DIAPH3Q9NSV4 1193 aa16.38■□□□□ 0.21
CACNA1C-222ENST00000406454 PHF14O94880 888 aa16.38■□□□□ 0.21
CACNA1C-222ENST00000406454 EVA1CP58658 441 aa16.37■□□□□ 0.21
CACNA1C-222ENST00000406454 ADAMTS8Q9UP79 889 aa16.37■□□□□ 0.21
CACNA1C-222ENST00000406454 HMOX1P09601 288 aa16.37■□□□□ 0.21
CACNA1C-222ENST00000406454 NECTIN2Q92692 538 aa16.37■□□□□ 0.21
CACNA1C-222ENST00000406454 FKBP5Q13451 457 aaPredicted RBP16.37■□□□□ 0.21
CACNA1C-222ENST00000406454 REC8O95072 547 aa16.36■□□□□ 0.21
CACNA1C-222ENST00000406454 HFM1A2PYH4 1435 aa16.36■□□□□ 0.21
CACNA1C-222ENST00000406454 FANCIQ9NVI1 1328 aa16.36■□□□□ 0.21
CACNA1C-222ENST00000406454 RUFY2Q8WXA3 655 aa16.35■□□□□ 0.21
CACNA1C-222ENST00000406454 EHBP1L1Q8N3D4 1523 aa16.35■□□□□ 0.21
CACNA1C-222ENST00000406454 TSPYL4Q9UJ04 414 aa16.35■□□□□ 0.21
CACNA1C-222ENST00000406454 SF3A1Q15459 793 aaKnown RBP16.35■□□□□ 0.21
CACNA1C-222ENST00000406454 NESP48681 1621 aa16.35■□□□□ 0.21
CACNA1C-222ENST00000406454 MRC2Q9UBG0 1479 aa16.35■□□□□ 0.21
CACNA1C-222ENST00000406454 RASSF8Q8NHQ8 419 aa16.35■□□□□ 0.21
CACNA1C-222ENST00000406454 G3V3G9 751 aa16.34■□□□□ 0.21
CACNA1C-222ENST00000406454 DDX58O95786 925 aaKnown RBP16.34■□□□□ 0.21
CACNA1C-222ENST00000406454 AAMPQ13685 434 aa16.34■□□□□ 0.21
CACNA1C-222ENST00000406454 DCAF8Q5TAQ9 597 aa16.34■□□□□ 0.21
CACNA1C-222ENST00000406454 CHMP4CQ96CF2 233 aa16.34■□□□□ 0.21
CACNA1C-222ENST00000406454 IFT140Q96RY7 1462 aa16.34■□□□□ 0.21
CACNA1C-222ENST00000406454 DDX49Q9Y6V7 483 aaKnown RBP16.34■□□□□ 0.21
CACNA1C-222ENST00000406454 ATP6V1DQ9Y5K8 247 aa16.34■□□□□ 0.21
CACNA1C-222ENST00000406454 MTHFSP49914 203 aa16.33■□□□□ 0.21
CACNA1C-222ENST00000406454 KIAA1107Q9UPP5 1409 aa16.33■□□□□ 0.21
CACNA1C-222ENST00000406454 H3BQV1 296 aa16.33■□□□□ 0.21
CACNA1C-222ENST00000406454 PPP2R1AP30153 589 aa16.33■□□□□ 0.21
CACNA1C-222ENST00000406454 IFFO2Q5TF58 517 aa16.33■□□□□ 0.21
CACNA1C-222ENST00000406454 IFIT2P09913 472 aaKnown RBP16.33■□□□□ 0.2
CACNA1C-222ENST00000406454 SKOR2Q2VWA4 1001 aaPredicted RBP16.33■□□□□ 0.2
CACNA1C-222ENST00000406454 C9orf84Q5VXU9 1444 aa16.33■□□□□ 0.2
CACNA1C-222ENST00000406454 NBPF1Q3BBV0 1214 aa16.33■□□□□ 0.2
CACNA1C-222ENST00000406454 FAM184AQ8NB25 1140 aa16.33■□□□□ 0.2
CACNA1C-222ENST00000406454 TOPBP1Q92547 1522 aa16.32■□□□□ 0.2
CACNA1C-222ENST00000406454 TROQ12816 1431 aaPredicted RBP16.32■□□□□ 0.2
CACNA1C-222ENST00000406454 PANK1Q8TE04 598 aa16.31■□□□□ 0.2
CACNA1C-222ENST00000406454 LRRFIP1Q32MZ4 808 aaKnown RBP16.31■□□□□ 0.2
CACNA1C-222ENST00000406454 NBPF8Q3BBV2 869 aa16.31■□□□□ 0.2
CACNA1C-222ENST00000406454 TCP11L2Q8N4U5 519 aa16.31■□□□□ 0.2
CACNA1C-222ENST00000406454 ZKSCAN1P17029 563 aaPredicted RBP16.31■□□□□ 0.2
CACNA1C-222ENST00000406454 TOP2BQ02880 1626 aa16.31■□□□□ 0.2
CACNA1C-222ENST00000406454 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
CACNA1C-222ENST00000406454 KRI1Q8N9T8 703 aaKnown RBP16.3■□□□□ 0.2
CACNA1C-222ENST00000406454 PLEKHH2Q8IVE3 1493 aa16.29■□□□□ 0.2
CACNA1C-222ENST00000406454 LNPKQ9C0E8 428 aa16.29■□□□□ 0.2
CACNA1C-222ENST00000406454 G3BP1Q13283 466 aaKnown RBP eCLIP16.29■□□□□ 0.2
CACNA1C-222ENST00000406454 RAPGEF4Q8WZA2 1011 aa16.29■□□□□ 0.2
CACNA1C-222ENST00000406454 HMGXB3Q12766 1538 aa16.28■□□□□ 0.2
CACNA1C-222ENST00000406454 HSP90AB4PQ58FF6 505 aa16.28■□□□□ 0.2
CACNA1C-222ENST00000406454 CDCA7LQ96GN5 454 aa16.28■□□□□ 0.2
CACNA1C-222ENST00000406454 GSE1Q14687 1217 aa16.28■□□□□ 0.2
CACNA1C-222ENST00000406454 ANO2Q9NQ90 1003 aa16.28■□□□□ 0.2
CACNA1C-222ENST00000406454 NLRP6P59044 892 aa16.27■□□□□ 0.2
CACNA1C-222ENST00000406454 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.2
CACNA1C-222ENST00000406454 FOXD4L6Q3SYB3 417 aaPredicted RBP16.27■□□□□ 0.2
CACNA1C-222ENST00000406454 FOXD4L3Q6VB84 417 aaPredicted RBP16.27■□□□□ 0.2
CACNA1C-222ENST00000406454 CHMP5Q9NZZ3 219 aa16.27■□□□□ 0.2
CACNA1C-222ENST00000406454 SCAPERQ9BY12 1400 aa16.26■□□□□ 0.19
CACNA1C-222ENST00000406454 NUTM2GQ5VZR2 741 aa16.25■□□□□ 0.19
CACNA1C-222ENST00000406454 SYNE3Q6ZMZ3 975 aa16.25■□□□□ 0.19
CACNA1C-222ENST00000406454 TIAM1Q13009 1591 aa16.25■□□□□ 0.19
CACNA1C-222ENST00000406454 AKAP17AQ02040 695 aaKnown RBP16.25■□□□□ 0.19
CACNA1C-222ENST00000406454 CPLX2Q6PUV4 134 aaKnown RBP16.25■□□□□ 0.19
CACNA1C-222ENST00000406454 PRAM1Q96QH2 718 aa16.25■□□□□ 0.19
CACNA1C-222ENST00000406454 DAPK1P53355 1430 aa16.24■□□□□ 0.19
CACNA1C-222ENST00000406454 CREBRFQ8IUR6 639 aa16.24■□□□□ 0.19
CACNA1C-222ENST00000406454 SNAPC4Q5SXM2 1469 aa16.24■□□□□ 0.19
CACNA1C-222ENST00000406454 ATF3P18847 181 aa16.24■□□□□ 0.19
CACNA1C-222ENST00000406454 RNF20Q5VTR2 975 aa16.24■□□□□ 0.19
CACNA1C-222ENST00000406454 MARCH6O60337 910 aa16.24■□□□□ 0.19
CACNA1C-222ENST00000406454 NLRP2Q9NX02 1062 aa16.24■□□□□ 0.19
CACNA1C-222ENST00000406454 PRKAR2BP31323 418 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms