RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 ABCC5O15440 1437 aa9.81□□□□□ -0.84
RPA3-204ENST00000406109 MYOM3Q5VTT5 1437 aa9.81□□□□□ -0.84
RPA3-204ENST00000406109 CAPN15O75808 1086 aa9.8□□□□□ -0.84
RPA3-204ENST00000406109 PROSER2Q86WR7 435 aaPredicted RBP9.8□□□□□ -0.84
RPA3-204ENST00000406109 RRP7BPQ9NSQ0 103 aa9.8□□□□□ -0.84
RPA3-204ENST00000406109 EFCAB6Q5THR3 1501 aa9.8□□□□□ -0.84
RPA3-204ENST00000406109 ERBINQ96RT1 1412 aa9.8□□□□□ -0.84
RPA3-204ENST00000406109 SLAIN2Q9P270 581 aa9.79□□□□□ -0.84
RPA3-204ENST00000406109 NWD1Q149M9 1564 aa9.79□□□□□ -0.84
RPA3-204ENST00000406109 LMTK2Q8IWU2 1503 aa9.78□□□□□ -0.84
RPA3-204ENST00000406109 NOS1P29475 1434 aa9.78□□□□□ -0.84
RPA3-204ENST00000406109 VPS8Q8N3P4 1428 aa9.78□□□□□ -0.84
RPA3-204ENST00000406109 CROCC2H7BZ55 1655 aa9.77□□□□□ -0.84
RPA3-204ENST00000406109 DSG3P32926 999 aa9.77□□□□□ -0.85
RPA3-204ENST00000406109 STAG3Q9UJ98 1225 aa9.77□□□□□ -0.85
RPA3-204ENST00000406109 NKTRP30414 1462 aaKnown RBP9.77□□□□□ -0.85
RPA3-204ENST00000406109 JCADQ9P266 1359 aa9.76□□□□□ -0.85
RPA3-204ENST00000406109 PHLPP1O60346 1717 aa9.76□□□□□ -0.85
RPA3-204ENST00000406109 COL16A1Q07092 1604 aaPredicted RBP9.76□□□□□ -0.85
RPA3-204ENST00000406109 CHD2O14647 1828 aaKnown RBP9.76□□□□□ -0.85
RPA3-204ENST00000406109 LRP6O75581 1613 aa9.75□□□□□ -0.85
RPA3-204ENST00000406109 ZFYVE9O95405 1425 aa9.75□□□□□ -0.85
RPA3-204ENST00000406109 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.85
RPA3-204ENST00000406109 ADGRB3O60242 1522 aa9.75□□□□□ -0.85
RPA3-204ENST00000406109 MSH6P52701 1360 aa9.75□□□□□ -0.85
RPA3-204ENST00000406109 DAPK1P53355 1430 aa9.74□□□□□ -0.85
RPA3-204ENST00000406109 SLC4A2P04920 1241 aa9.74□□□□□ -0.85
RPA3-204ENST00000406109 SLC52A1Q9NWF4 448 aa9.74□□□□□ -0.85
RPA3-204ENST00000406109 MYO5BQ9ULV0 1848 aa9.74□□□□□ -0.85
RPA3-204ENST00000406109 PTPN23Q9H3S7 1636 aa9.74□□□□□ -0.85
RPA3-204ENST00000406109 KANK1Q14678 1352 aa9.74□□□□□ -0.85
RPA3-204ENST00000406109 PLEKHG1Q9ULL1 1385 aa9.73□□□□□ -0.85
RPA3-204ENST00000406109 CHIC2Q9UKJ5 165 aa9.72□□□□□ -0.85
RPA3-204ENST00000406109 SPATA31A6Q5VVP1 1343 aa9.71□□□□□ -0.86
RPA3-204ENST00000406109 FGD6Q6ZV73 1430 aa9.71□□□□□ -0.86
RPA3-204ENST00000406109 NCOA3Q9Y6Q9 1424 aa9.71□□□□□ -0.86
RPA3-204ENST00000406109 TBX22Q9Y458 520 aa9.7□□□□□ -0.86
RPA3-204ENST00000406109 ANKRD30AQ9BXX3 1397 aa9.7□□□□□ -0.86
RPA3-204ENST00000406109 ADAMTS13Q76LX8 1427 aa9.7□□□□□ -0.86
RPA3-204ENST00000406109 RIMS2Q9UQ26 1411 aa9.7□□□□□ -0.86
RPA3-204ENST00000406109 TMEM131LA2VDJ0 1609 aa9.7□□□□□ -0.86
RPA3-204ENST00000406109 AHDC1Q5TGY3 1603 aaPredicted RBP9.7□□□□□ -0.86
RPA3-204ENST00000406109 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.7□□□□□ -0.86
RPA3-204ENST00000406109 SHPRHQ149N8 1683 aa9.69□□□□□ -0.86
RPA3-204ENST00000406109 RPRD2Q5VT52 1461 aaKnown RBP9.69□□□□□ -0.86
RPA3-204ENST00000406109 ZNF772Q68DY9 489 aaPredicted RBP9.69□□□□□ -0.86
RPA3-204ENST00000406109 TRIM52Q96A61 297 aa9.69□□□□□ -0.86
RPA3-204ENST00000406109 BCANQ96GW7 911 aa9.69□□□□□ -0.86
RPA3-204ENST00000406109 DIP2AQ14689 1571 aa9.68□□□□□ -0.86
RPA3-204ENST00000406109 C19orf44Q9H6X5 657 aa9.68□□□□□ -0.86
RPA3-204ENST00000406109 GCC2Q8IWJ2 1684 aa9.67□□□□□ -0.86
RPA3-204ENST00000406109 ADGRL2O95490 1459 aa9.67□□□□□ -0.86
RPA3-204ENST00000406109 BRINP3Q76B58 766 aa9.67□□□□□ -0.86
RPA3-204ENST00000406109 CADPS2Q86UW7 1296 aa9.67□□□□□ -0.86
RPA3-204ENST00000406109 PTPRUQ92729 1446 aa9.66□□□□□ -0.86
RPA3-204ENST00000406109 RXRBP28702 533 aa9.66□□□□□ -0.86
RPA3-204ENST00000406109 MEX3CQ5U5Q3 659 aaKnown RBP9.66□□□□□ -0.86
RPA3-204ENST00000406109 NUTM2DQ5VT03 806 aaPredicted RBP9.66□□□□□ -0.86
RPA3-204ENST00000406109 CDK12Q9NYV4 1490 aaPredicted RBP9.66□□□□□ -0.86
RPA3-204ENST00000406109 PPP1R15AO75807 674 aaPredicted RBP9.65□□□□□ -0.86
RPA3-204ENST00000406109 HDGFP51858 240 aaKnown RBP9.65□□□□□ -0.86
RPA3-204ENST00000406109 ANKRD50Q9ULJ7 1429 aa9.65□□□□□ -0.87
RPA3-204ENST00000406109 PIK3R4Q99570 1358 aa9.64□□□□□ -0.87
RPA3-204ENST00000406109 ATF3P18847 181 aa9.64□□□□□ -0.87
RPA3-204ENST00000406109 C14orf37Q86TY3 774 aa9.64□□□□□ -0.87
RPA3-204ENST00000406109 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.64□□□□□ -0.87
RPA3-204ENST00000406109 AMOTL2Q9Y2J4 779 aa9.64□□□□□ -0.87
RPA3-204ENST00000406109 SETD5Q9C0A6 1442 aa9.64□□□□□ -0.87
RPA3-204ENST00000406109 AFF2P51816 1311 aa9.63□□□□□ -0.87
RPA3-204ENST00000406109 NUTM2BA6NNL0 878 aaPredicted RBP9.63□□□□□ -0.87
RPA3-204ENST00000406109 NUTM2EB1AL46 878 aaPredicted RBP9.63□□□□□ -0.87
RPA3-204ENST00000406109 NUTM2AQ8IVF1 878 aaPredicted RBP9.63□□□□□ -0.87
RPA3-204ENST00000406109 ASXL1Q8IXJ9 1541 aa9.62□□□□□ -0.87
RPA3-204ENST00000406109 E9PCH4 1651 aa9.62□□□□□ -0.87
RPA3-204ENST00000406109 NHSL1Q5SYE7 1610 aa9.61□□□□□ -0.87
RPA3-204ENST00000406109 NRXN3Q9Y4C0 1643 aa9.61□□□□□ -0.87
RPA3-204ENST00000406109 CHGAP10645 457 aaKnown RBP9.61□□□□□ -0.87
RPA3-204ENST00000406109 DDX17Q92841 729 aaKnown RBP9.61□□□□□ -0.87
RPA3-204ENST00000406109 RGS12O14924 1447 aa9.61□□□□□ -0.87
RPA3-204ENST00000406109 DCCP43146 1447 aa9.61□□□□□ -0.87
RPA3-204ENST00000406109 MST1RQ04912 1400 aa9.61□□□□□ -0.87
RPA3-204ENST00000406109 UNC13BO14795 1591 aa9.61□□□□□ -0.87
RPA3-204ENST00000406109 XRN1Q8IZH2 1706 aaKnown RBP9.6□□□□□ -0.87
RPA3-204ENST00000406109 QTRT2Q9H974 415 aaKnown RBP9.6□□□□□ -0.87
RPA3-204ENST00000406109 TRPM2O94759 1503 aa9.6□□□□□ -0.87
RPA3-204ENST00000406109 RBM6P78332 1123 aaKnown RBP9.59□□□□□ -0.87
RPA3-204ENST00000406109 APLP2Q06481 763 aa9.59□□□□□ -0.87
RPA3-204ENST00000406109 LRRC59Q96AG4 307 aaKnown RBP9.59□□□□□ -0.87
RPA3-204ENST00000406109 METP08581 1390 aa9.59□□□□□ -0.87
RPA3-204ENST00000406109 PNPLA6Q8IY17 1366 aa9.59□□□□□ -0.87
RPA3-204ENST00000406109 ABCB7O75027 752 aa9.58□□□□□ -0.88
RPA3-204ENST00000406109 FAM50AQ14320 339 aaKnown RBP9.58□□□□□ -0.88
RPA3-204ENST00000406109 C8orf37Q96NL8 207 aa9.58□□□□□ -0.88
RPA3-204ENST00000406109 SETBP1Q9Y6X0 1596 aa9.58□□□□□ -0.88
RPA3-204ENST00000406109 IQGAP3Q86VI3 1631 aa9.57□□□□□ -0.88
RPA3-204ENST00000406109 POTEHQ6S545 545 aa9.57□□□□□ -0.88
RPA3-204ENST00000406109 ZNF219Q9P2Y4 722 aaPredicted RBP9.57□□□□□ -0.88
RPA3-204ENST00000406109 UTRNP46939 3433 aa9.56□□□□□ -0.88
RPA3-204ENST00000406109 LAMC1P11047 1609 aa9.55□□□□□ -0.88
RPA3-204ENST00000406109 ADGRL3Q9HAR2 1447 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms