RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 ZFYVE9O95405 1425 aa30.79■■■□□ 2.52
PDGFA-204ENST00000405692 MYO5BQ9ULV0 1848 aa30.77■■■□□ 2.52
PDGFA-204ENST00000405692 CLTCL1P53675 1640 aa30.76■■■□□ 2.52
PDGFA-204ENST00000405692 FOXD1Q16676 465 aa30.76■■■□□ 2.51
PDGFA-204ENST00000405692 ZNF326Q5BKZ1 582 aaKnown RBP30.76■■■□□ 2.51
PDGFA-204ENST00000405692 BCANQ96GW7 911 aa30.76■■■□□ 2.51
PDGFA-204ENST00000405692 PLEKHG1Q9ULL1 1385 aa30.73■■■□□ 2.51
PDGFA-204ENST00000405692 CCDC144AA2RUR9 1427 aa30.72■■■□□ 2.51
PDGFA-204ENST00000405692 FBXO41Q8TF61 875 aa30.71■■■□□ 2.51
PDGFA-204ENST00000405692 CPS1P31327 1500 aa30.71■■■□□ 2.51
PDGFA-204ENST00000405692 KIF1BO60333 1816 aa30.7■■■□□ 2.51
PDGFA-204ENST00000405692 IQSEC2Q5JU85 1478 aa30.7■■■□□ 2.5
PDGFA-204ENST00000405692 NUTM2DQ5VT03 806 aaPredicted RBP30.65■■■□□ 2.5
PDGFA-204ENST00000405692 SLC26A8Q96RN1 970 aa30.65■■■□□ 2.5
PDGFA-204ENST00000405692 RPGRIP1LQ68CZ1 1315 aa30.64■■■□□ 2.5
PDGFA-204ENST00000405692 TRIM26Q12899 539 aaPredicted RBP30.63■■■□□ 2.49
PDGFA-204ENST00000405692 TBX22Q9Y458 520 aa30.61■■■□□ 2.49
PDGFA-204ENST00000405692 ILDR1Q86SU0 546 aaPredicted RBP30.6■■■□□ 2.49
PDGFA-204ENST00000405692 VGFO15240 615 aaPredicted RBP30.59■■■□□ 2.49
PDGFA-204ENST00000405692 NEXMIFQ5QGS0 1516 aa30.57■■■□□ 2.49
PDGFA-204ENST00000405692 KCNA6P17658 529 aa30.57■■■□□ 2.48
PDGFA-204ENST00000405692 SENP3Q9H4L4 574 aaPredicted RBP30.57■■■□□ 2.48
PDGFA-204ENST00000405692 DIP2AQ14689 1571 aa30.56■■■□□ 2.48
PDGFA-204ENST00000405692 ADAMTS13Q76LX8 1427 aa30.53■■■□□ 2.48
PDGFA-204ENST00000405692 ANKRD30BQ9BXX2 1392 aa30.53■■■□□ 2.48
PDGFA-204ENST00000405692 SPATA31E1Q6ZUB1 1445 aa30.52■■■□□ 2.48
PDGFA-204ENST00000405692 PIK3R4Q99570 1358 aa30.52■■■□□ 2.48
PDGFA-204ENST00000405692 RGL3Q3MIN7 710 aa30.51■■■□□ 2.47
PDGFA-204ENST00000405692 SETBP1Q9Y6X0 1596 aa30.5■■■□□ 2.47
PDGFA-204ENST00000405692 LRRC7Q96NW7 1537 aa30.5■■■□□ 2.47
PDGFA-204ENST00000405692 STRCP1A6NGW2 1772 aa30.5■■■□□ 2.47
PDGFA-204ENST00000405692 NWD1Q149M9 1564 aa30.46■■■□□ 2.47
PDGFA-204ENST00000405692 NKTRP30414 1462 aaKnown RBP30.46■■■□□ 2.47
PDGFA-204ENST00000405692 UBAP1LF5GYI3 381 aa30.45■■■□□ 2.47
PDGFA-204ENST00000405692 PROSER2Q86WR7 435 aaPredicted RBP30.44■■■□□ 2.46
PDGFA-204ENST00000405692 PPLO60437 1756 aa30.43■■■□□ 2.46
PDGFA-204ENST00000405692 TOM1O60784 492 aa30.43■■■□□ 2.46
PDGFA-204ENST00000405692 NRXN3Q9Y4C0 1643 aa30.42■■■□□ 2.46
PDGFA-204ENST00000405692 CHD2O14647 1828 aaKnown RBP30.42■■■□□ 2.46
PDGFA-204ENST00000405692 TMEM94Q12767 1356 aa30.38■■■□□ 2.45
PDGFA-204ENST00000405692 AMOTL2Q9Y2J4 779 aa30.37■■■□□ 2.45
PDGFA-204ENST00000405692 METP08581 1390 aa30.34■■■□□ 2.45
PDGFA-204ENST00000405692 ADGRF5Q8IZF2 1346 aa30.34■■■□□ 2.45
PDGFA-204ENST00000405692 IFT172Q9UG01 1749 aa30.33■■■□□ 2.45
PDGFA-204ENST00000405692 NCOA3Q9Y6Q9 1424 aa30.32■■■□□ 2.44
PDGFA-204ENST00000405692 STAC3Q96MF2 364 aa30.32■■■□□ 2.44
PDGFA-204ENST00000405692 ALKQ9UM73 1620 aa30.32■■■□□ 2.44
PDGFA-204ENST00000405692 PTPRUQ92729 1446 aa30.31■■■□□ 2.44
PDGFA-204ENST00000405692 MYOM2P54296 1465 aa30.29■■■□□ 2.44
PDGFA-204ENST00000405692 MSH6P52701 1360 aa30.28■■■□□ 2.44
PDGFA-204ENST00000405692 PIK3C2GO75747 1445 aa30.27■■■□□ 2.44
PDGFA-204ENST00000405692 XIRP1Q702N8 1843 aaKnown RBP30.26■■■□□ 2.44
PDGFA-204ENST00000405692 SCAF1Q9H7N4 1312 aaKnown RBP30.26■■■□□ 2.44
PDGFA-204ENST00000405692 C14orf37Q86TY3 774 aa30.26■■■□□ 2.43
PDGFA-204ENST00000405692 RBM33Q96EV2 1170 aaKnown RBP30.26■■■□□ 2.43
PDGFA-204ENST00000405692 XRN1Q8IZH2 1706 aaKnown RBP30.25■■■□□ 2.43
PDGFA-204ENST00000405692 PIP4K2BP78356 416 aa30.25■■■□□ 2.43
PDGFA-204ENST00000405692 DCAF11Q8TEB1 546 aa30.23■■■□□ 2.43
PDGFA-204ENST00000405692 NRXN1Q9ULB1 1477 aa30.23■■■□□ 2.43
PDGFA-204ENST00000405692 SETD1AO15047 1707 aaKnown RBP30.22■■■□□ 2.43
PDGFA-204ENST00000405692 DHX57Q6P158 1386 aaKnown RBP30.21■■■□□ 2.43
PDGFA-204ENST00000405692 C19orf44Q9H6X5 657 aa30.2■■■□□ 2.43
PDGFA-204ENST00000405692 C14orf93Q9H972 538 aaKnown RBP30.19■■■□□ 2.42
PDGFA-204ENST00000405692 KDM2AQ9Y2K7 1162 aa30.19■■■□□ 2.42
PDGFA-204ENST00000405692 PTCH1Q13635 1447 aa30.18■■■□□ 2.42
PDGFA-204ENST00000405692 PRAG1Q86YV5 1406 aa30.17■■■□□ 2.42
PDGFA-204ENST00000405692 LAMC1P11047 1609 aa30.15■■■□□ 2.42
PDGFA-204ENST00000405692 CADPS2Q86UW7 1296 aa30.15■■■□□ 2.42
PDGFA-204ENST00000405692 ATF3P18847 181 aa30.14■■■□□ 2.42
PDGFA-204ENST00000405692 CFAP70Q5T0N1 1121 aa30.13■■■□□ 2.41
PDGFA-204ENST00000405692 LRPPRCP42704 1394 aaKnown RBP30.13■■■□□ 2.41
PDGFA-204ENST00000405692 TMEM132EQ6IEE7 984 aa30.11■■■□□ 2.41
PDGFA-204ENST00000405692 ABCC11Q96J66 1382 aa30.1■■■□□ 2.41
PDGFA-204ENST00000405692 ROBO2Q9HCK4 1378 aa30.1■■■□□ 2.41
PDGFA-204ENST00000405692 DCCP43146 1447 aa30.1■■■□□ 2.41
PDGFA-204ENST00000405692 PCGF6Q9BYE7 350 aa30.09■■■□□ 2.41
PDGFA-204ENST00000405692 SLAIN2Q9P270 581 aa30.09■■■□□ 2.41
PDGFA-204ENST00000405692 STK26Q9P289 416 aa30.09■■■□□ 2.41
PDGFA-204ENST00000405692 FAM135BQ49AJ0 1406 aa30.08■■■□□ 2.41
PDGFA-204ENST00000405692 YTHDC2Q9H6S0 1430 aaKnown RBP30.08■■■□□ 2.41
PDGFA-204ENST00000405692 SIN3AQ96ST3 1273 aa30.08■■■□□ 2.41
PDGFA-204ENST00000405692 TECPR2O15040 1411 aa30.07■■■□□ 2.4
PDGFA-204ENST00000405692 ADGRL3Q9HAR2 1447 aa30.07■■■□□ 2.4
PDGFA-204ENST00000405692 NEUROD1Q13562 356 aa30.07■■■□□ 2.4
PDGFA-204ENST00000405692 ASXL1Q8IXJ9 1541 aa30.06■■■□□ 2.4
PDGFA-204ENST00000405692 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.06■■■□□ 2.4
PDGFA-204ENST00000405692 SIRT1Q96EB6 747 aa30.04■■■□□ 2.4
PDGFA-204ENST00000405692 HSPA1LP34931 641 aa30.03■■■□□ 2.4
PDGFA-204ENST00000405692 KNDC1Q76NI1 1749 aa30.02■■■□□ 2.4
PDGFA-204ENST00000405692 L3MBTL2Q969R5 705 aa30■■■□□ 2.39
PDGFA-204ENST00000405692 NALCNQ8IZF0 1738 aa29.96■■■□□ 2.39
PDGFA-204ENST00000405692 ROBO1Q9Y6N7 1651 aa29.96■■■□□ 2.39
PDGFA-204ENST00000405692 ADGRB1O14514 1584 aa29.96■■■□□ 2.39
PDGFA-204ENST00000405692 WAPLQ7Z5K2 1190 aa29.96■■■□□ 2.39
PDGFA-204ENST00000405692 DLC1Q96QB1 1528 aa29.93■■■□□ 2.38
PDGFA-204ENST00000405692 MST1RQ04912 1400 aa29.92■■■□□ 2.38
PDGFA-204ENST00000405692 POGKQ9P215 609 aa29.92■■■□□ 2.38
PDGFA-204ENST00000405692 KIAA1210Q9ULL0 1709 aa29.91■■■□□ 2.38
PDGFA-204ENST00000405692 TONSLQ96HA7 1378 aa29.9■■■□□ 2.38
PDGFA-204ENST00000405692 PRAM1Q96QH2 718 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms