RNA–Protein interactions for RNA: ENST00000405369.3

LINC01644-201, Transcript of long intergenic non-protein coding RNA 1644, humanhuman

TSL 1 (best) BASIC

Gene LINC01644, Length 984 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01644-201ENST00000405369 FOXD1Q16676 465 aa12.18□□□□□ -0.46
LINC01644-201ENST00000405369 PHF23Q9BUL5 403 aaPredicted RBP12.18□□□□□ -0.46
LINC01644-201ENST00000405369 NCKAP5LQ9HCH0 1330 aa12.17□□□□□ -0.46
LINC01644-201ENST00000405369 MED14O60244 1454 aa12.17□□□□□ -0.46
LINC01644-201ENST00000405369 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.17□□□□□ -0.46
LINC01644-201ENST00000405369 RIMS2Q9UQ26 1411 aa12.17□□□□□ -0.46
LINC01644-201ENST00000405369 PPP1R15AO75807 674 aaPredicted RBP12.16□□□□□ -0.46
LINC01644-201ENST00000405369 ZNF326Q5BKZ1 582 aaKnown RBP12.16□□□□□ -0.46
LINC01644-201ENST00000405369 TXNDC2Q86VQ3 553 aa12.16□□□□□ -0.46
LINC01644-201ENST00000405369 NPHP4O75161 1426 aaPredicted RBP12.16□□□□□ -0.46
LINC01644-201ENST00000405369 PPLO60437 1756 aa12.15□□□□□ -0.46
LINC01644-201ENST00000405369 ZFYVE9O95405 1425 aa12.14□□□□□ -0.47
LINC01644-201ENST00000405369 PCGF6Q9BYE7 350 aa12.14□□□□□ -0.47
LINC01644-201ENST00000405369 ANKRD30BQ9BXX2 1392 aa12.14□□□□□ -0.47
LINC01644-201ENST00000405369 NEXMIFQ5QGS0 1516 aa12.13□□□□□ -0.47
LINC01644-201ENST00000405369 IFT172Q9UG01 1749 aa12.13□□□□□ -0.47
LINC01644-201ENST00000405369 LTKP29376 864 aa12.12□□□□□ -0.47
LINC01644-201ENST00000405369 DIP2AQ14689 1571 aa12.12□□□□□ -0.47
LINC01644-201ENST00000405369 RPGRIP1LQ68CZ1 1315 aa12.11□□□□□ -0.47
LINC01644-201ENST00000405369 PLEKHG1Q9ULL1 1385 aa12.11□□□□□ -0.47
LINC01644-201ENST00000405369 BCANQ96GW7 911 aa12.11□□□□□ -0.47
LINC01644-201ENST00000405369 SPATA31E1Q6ZUB1 1445 aa12.1□□□□□ -0.47
LINC01644-201ENST00000405369 DHX57Q6P158 1386 aaKnown RBP12.09□□□□□ -0.47
LINC01644-201ENST00000405369 LTBP4Q8N2S1 1624 aa12.08□□□□□ -0.48
LINC01644-201ENST00000405369 VGFO15240 615 aaPredicted RBP12.08□□□□□ -0.48
LINC01644-201ENST00000405369 SETBP1Q9Y6X0 1596 aa12.08□□□□□ -0.48
LINC01644-201ENST00000405369 RGL3Q3MIN7 710 aa12.07□□□□□ -0.48
LINC01644-201ENST00000405369 CHD2O14647 1828 aaKnown RBP12.07□□□□□ -0.48
LINC01644-201ENST00000405369 NUTM2DQ5VT03 806 aaPredicted RBP12.06□□□□□ -0.48
LINC01644-201ENST00000405369 CPS1P31327 1500 aa12.06□□□□□ -0.48
LINC01644-201ENST00000405369 NRXN3Q9Y4C0 1643 aa12.05□□□□□ -0.48
LINC01644-201ENST00000405369 MYOM2P54296 1465 aa12.05□□□□□ -0.48
LINC01644-201ENST00000405369 LAMC1P11047 1609 aa12.04□□□□□ -0.48
LINC01644-201ENST00000405369 PIK3R4Q99570 1358 aa12.04□□□□□ -0.48
LINC01644-201ENST00000405369 IQSEC2Q5JU85 1478 aa12.03□□□□□ -0.48
LINC01644-201ENST00000405369 STRCP1A6NGW2 1772 aa12.03□□□□□ -0.48
LINC01644-201ENST00000405369 STAC3Q96MF2 364 aa12.03□□□□□ -0.48
LINC01644-201ENST00000405369 SLC26A8Q96RN1 970 aa12.03□□□□□ -0.48
LINC01644-201ENST00000405369 TBX22Q9Y458 520 aa12.03□□□□□ -0.48
LINC01644-201ENST00000405369 NWD1Q149M9 1564 aa12.03□□□□□ -0.48
LINC01644-201ENST00000405369 ZNF335Q9H4Z2 1342 aaPredicted RBP12.03□□□□□ -0.48
LINC01644-201ENST00000405369 SETD1AO15047 1707 aaKnown RBP12.03□□□□□ -0.48
LINC01644-201ENST00000405369 ADAMTS13Q76LX8 1427 aa12.03□□□□□ -0.48
LINC01644-201ENST00000405369 NKTRP30414 1462 aaKnown RBP12.02□□□□□ -0.49
LINC01644-201ENST00000405369 ALKQ9UM73 1620 aa12.01□□□□□ -0.49
LINC01644-201ENST00000405369 UBAP1LF5GYI3 381 aa12.01□□□□□ -0.49
LINC01644-201ENST00000405369 SENP3Q9H4L4 574 aaPredicted RBP12.01□□□□□ -0.49
LINC01644-201ENST00000405369 KCNA6P17658 529 aa12□□□□□ -0.49
LINC01644-201ENST00000405369 CLSPNQ9HAW4 1339 aa12□□□□□ -0.49
LINC01644-201ENST00000405369 PIK3C2GO75747 1445 aa12□□□□□ -0.49
LINC01644-201ENST00000405369 DCAF11Q8TEB1 546 aa11.99□□□□□ -0.49
LINC01644-201ENST00000405369 ADGRF5Q8IZF2 1346 aa11.99□□□□□ -0.49
LINC01644-201ENST00000405369 NRXN1Q9ULB1 1477 aa11.99□□□□□ -0.49
LINC01644-201ENST00000405369 XRN1Q8IZH2 1706 aaKnown RBP11.98□□□□□ -0.49
LINC01644-201ENST00000405369 KIAA1210Q9ULL0 1709 aa11.98□□□□□ -0.49
LINC01644-201ENST00000405369 NEUROD1Q13562 356 aa11.98□□□□□ -0.49
LINC01644-201ENST00000405369 TONSLQ96HA7 1378 aa11.97□□□□□ -0.49
LINC01644-201ENST00000405369 SIN3AQ96ST3 1273 aa11.97□□□□□ -0.49
LINC01644-201ENST00000405369 KDM2AQ9Y2K7 1162 aa11.97□□□□□ -0.49
LINC01644-201ENST00000405369 XIRP1Q702N8 1843 aaKnown RBP11.97□□□□□ -0.49
LINC01644-201ENST00000405369 KNDC1Q76NI1 1749 aa11.97□□□□□ -0.49
LINC01644-201ENST00000405369 HSPA1LP34931 641 aa11.96□□□□□ -0.49
LINC01644-201ENST00000405369 LRRC7Q96NW7 1537 aa11.96□□□□□ -0.5
LINC01644-201ENST00000405369 CCER1Q8TC90 406 aaPredicted RBP11.95□□□□□ -0.5
LINC01644-201ENST00000405369 METP08581 1390 aa11.94□□□□□ -0.5
LINC01644-201ENST00000405369 PROSER2Q86WR7 435 aaPredicted RBP11.94□□□□□ -0.5
LINC01644-201ENST00000405369 AMOTL2Q9Y2J4 779 aa11.94□□□□□ -0.5
LINC01644-201ENST00000405369 PTCH1Q13635 1447 aa11.94□□□□□ -0.5
LINC01644-201ENST00000405369 C14orf93Q9H972 538 aaKnown RBP11.93□□□□□ -0.5
LINC01644-201ENST00000405369 PRAG1Q86YV5 1406 aa11.93□□□□□ -0.5
LINC01644-201ENST00000405369 PTPRUQ92729 1446 aa11.93□□□□□ -0.5
LINC01644-201ENST00000405369 NCOA3Q9Y6Q9 1424 aa11.93□□□□□ -0.5
LINC01644-201ENST00000405369 L3MBTL2Q969R5 705 aa11.92□□□□□ -0.5
LINC01644-201ENST00000405369 TMEM94Q12767 1356 aa11.92□□□□□ -0.5
LINC01644-201ENST00000405369 ASXL1Q8IXJ9 1541 aa11.91□□□□□ -0.5
LINC01644-201ENST00000405369 CFAP70Q5T0N1 1121 aa11.91□□□□□ -0.5
LINC01644-201ENST00000405369 C14orf37Q86TY3 774 aa11.91□□□□□ -0.5
LINC01644-201ENST00000405369 YTHDC2Q9H6S0 1430 aaKnown RBP11.91□□□□□ -0.5
LINC01644-201ENST00000405369 LRPPRCP42704 1394 aaKnown RBP11.91□□□□□ -0.5
LINC01644-201ENST00000405369 MSH6P52701 1360 aa11.91□□□□□ -0.5
LINC01644-201ENST00000405369 TRPM1Q7Z4N2 1603 aa11.9□□□□□ -0.5
LINC01644-201ENST00000405369 TECPR2O15040 1411 aa11.9□□□□□ -0.5
LINC01644-201ENST00000405369 ADGRB1O14514 1584 aa11.89□□□□□ -0.51
LINC01644-201ENST00000405369 ABCC11Q96J66 1382 aa11.89□□□□□ -0.51
LINC01644-201ENST00000405369 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.89□□□□□ -0.51
LINC01644-201ENST00000405369 DLC1Q96QB1 1528 aa11.88□□□□□ -0.51
LINC01644-201ENST00000405369 TOM1O60784 492 aa11.88□□□□□ -0.51
LINC01644-201ENST00000405369 TMEM132EQ6IEE7 984 aa11.88□□□□□ -0.51
LINC01644-201ENST00000405369 STK26Q9P289 416 aa11.88□□□□□ -0.51
LINC01644-201ENST00000405369 TIMELESSQ9UNS1 1208 aa11.88□□□□□ -0.51
LINC01644-201ENST00000405369 NALCNQ8IZF0 1738 aa11.88□□□□□ -0.51
LINC01644-201ENST00000405369 ARHGEF28Q8N1W1 1705 aaKnown RBP11.88□□□□□ -0.51
LINC01644-201ENST00000405369 MED1Q15648 1581 aaPredicted RBP11.88□□□□□ -0.51
LINC01644-201ENST00000405369 DCCP43146 1447 aa11.86□□□□□ -0.51
LINC01644-201ENST00000405369 FAM135BQ49AJ0 1406 aa11.86□□□□□ -0.51
LINC01644-201ENST00000405369 ADGRL3Q9HAR2 1447 aa11.86□□□□□ -0.51
LINC01644-201ENST00000405369 PIP4K2BP78356 416 aa11.86□□□□□ -0.51
LINC01644-201ENST00000405369 ROBO2Q9HCK4 1378 aa11.86□□□□□ -0.51
LINC01644-201ENST00000405369 CADPS2Q86UW7 1296 aa11.85□□□□□ -0.51
LINC01644-201ENST00000405369 SIRT1Q96EB6 747 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms