RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 SLC4A1APQ9BWU0 796 aaKnown RBP24.62■■□□□ 1.53
CGREF1-205ENST00000404694 PLEKHG1Q9ULL1 1385 aa24.61■■□□□ 1.53
CGREF1-205ENST00000404694 LRRC7Q96NW7 1537 aa24.6■■□□□ 1.53
CGREF1-205ENST00000404694 PPP1R15AO75807 674 aaPredicted RBP24.59■■□□□ 1.53
CGREF1-205ENST00000404694 HDGFP51858 240 aaKnown RBP24.59■■□□□ 1.53
CGREF1-205ENST00000404694 SETD5Q9C0A6 1442 aa24.58■■□□□ 1.53
CGREF1-205ENST00000404694 SLC26A8Q96RN1 970 aa24.58■■□□□ 1.53
CGREF1-205ENST00000404694 KIF1BO60333 1816 aa24.58■■□□□ 1.53
CGREF1-205ENST00000404694 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.57■■□□□ 1.52
CGREF1-205ENST00000404694 UBAP1LF5GYI3 381 aa24.56■■□□□ 1.52
CGREF1-205ENST00000404694 NWD1Q149M9 1564 aa24.55■■□□□ 1.52
CGREF1-205ENST00000404694 NUTM2DQ5VT03 806 aaPredicted RBP24.54■■□□□ 1.52
CGREF1-205ENST00000404694 BCANQ96GW7 911 aa24.54■■□□□ 1.52
CGREF1-205ENST00000404694 PCGF6Q9BYE7 350 aa24.54■■□□□ 1.52
CGREF1-205ENST00000404694 SENP3Q9H4L4 574 aaPredicted RBP24.54■■□□□ 1.52
CGREF1-205ENST00000404694 XIRP1Q702N8 1843 aaKnown RBP24.53■■□□□ 1.52
CGREF1-205ENST00000404694 DIP2AQ14689 1571 aa24.52■■□□□ 1.52
CGREF1-205ENST00000404694 NEXMIFQ5QGS0 1516 aa24.51■■□□□ 1.51
CGREF1-205ENST00000404694 RAB3GAP2Q9H2M9 1393 aa24.51■■□□□ 1.51
CGREF1-205ENST00000404694 ACIN1Q9UKV3 1341 aaKnown RBP24.5■■□□□ 1.51
CGREF1-205ENST00000404694 CHD2O14647 1828 aaKnown RBP24.5■■□□□ 1.51
CGREF1-205ENST00000404694 ADAMTS13Q76LX8 1427 aa24.5■■□□□ 1.51
CGREF1-205ENST00000404694 KCNA6P17658 529 aa24.5■■□□□ 1.51
CGREF1-205ENST00000404694 FOXD1Q16676 465 aa24.5■■□□□ 1.51
CGREF1-205ENST00000404694 ZNF326Q5BKZ1 582 aaKnown RBP24.5■■□□□ 1.51
CGREF1-205ENST00000404694 MPHOSPH9Q99550 1183 aa24.5■■□□□ 1.51
CGREF1-205ENST00000404694 ALKQ9UM73 1620 aa24.49■■□□□ 1.51
CGREF1-205ENST00000404694 NKTRP30414 1462 aaKnown RBP24.49■■□□□ 1.51
CGREF1-205ENST00000404694 NRXN3Q9Y4C0 1643 aa24.47■■□□□ 1.51
CGREF1-205ENST00000404694 SETBP1Q9Y6X0 1596 aa24.46■■□□□ 1.51
CGREF1-205ENST00000404694 TOM1O60784 492 aa24.46■■□□□ 1.51
CGREF1-205ENST00000404694 TBX22Q9Y458 520 aa24.46■■□□□ 1.51
CGREF1-205ENST00000404694 TMEM94Q12767 1356 aa24.43■■□□□ 1.5
CGREF1-205ENST00000404694 CCDC144AA2RUR9 1427 aa24.43■■□□□ 1.5
CGREF1-205ENST00000404694 PIK3R4Q99570 1358 aa24.41■■□□□ 1.5
CGREF1-205ENST00000404694 PIP4K2BP78356 416 aa24.41■■□□□ 1.5
CGREF1-205ENST00000404694 PPLO60437 1756 aa24.4■■□□□ 1.5
CGREF1-205ENST00000404694 SCAF1Q9H7N4 1312 aaKnown RBP24.4■■□□□ 1.5
CGREF1-205ENST00000404694 PROSER2Q86WR7 435 aaPredicted RBP24.39■■□□□ 1.49
CGREF1-205ENST00000404694 RBM33Q96EV2 1170 aaKnown RBP24.36■■□□□ 1.49
CGREF1-205ENST00000404694 SPATA31E1Q6ZUB1 1445 aa24.35■■□□□ 1.49
CGREF1-205ENST00000404694 PTPRUQ92729 1446 aa24.35■■□□□ 1.49
CGREF1-205ENST00000404694 RPGRIP1LQ68CZ1 1315 aa24.35■■□□□ 1.49
CGREF1-205ENST00000404694 XRN1Q8IZH2 1706 aaKnown RBP24.34■■□□□ 1.49
CGREF1-205ENST00000404694 IFT172Q9UG01 1749 aa24.33■■□□□ 1.49
CGREF1-205ENST00000404694 SETD1AO15047 1707 aaKnown RBP24.32■■□□□ 1.48
CGREF1-205ENST00000404694 VGFO15240 615 aaPredicted RBP24.32■■□□□ 1.48
CGREF1-205ENST00000404694 HRCP23327 699 aa24.32■■□□□ 1.48
CGREF1-205ENST00000404694 METP08581 1390 aa24.32■■□□□ 1.48
CGREF1-205ENST00000404694 AMOTL2Q9Y2J4 779 aa24.29■■□□□ 1.48
CGREF1-205ENST00000404694 MSH6P52701 1360 aa24.29■■□□□ 1.48
CGREF1-205ENST00000404694 HSPA1LP34931 641 aa24.29■■□□□ 1.48
CGREF1-205ENST00000404694 NCOA3Q9Y6Q9 1424 aa24.28■■□□□ 1.48
CGREF1-205ENST00000404694 RGL3Q3MIN7 710 aa24.27■■□□□ 1.48
CGREF1-205ENST00000404694 ANKRD30BQ9BXX2 1392 aa24.24■■□□□ 1.47
CGREF1-205ENST00000404694 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.23■■□□□ 1.47
CGREF1-205ENST00000404694 FAM135BQ49AJ0 1406 aa24.22■■□□□ 1.47
CGREF1-205ENST00000404694 ROBO1Q9Y6N7 1651 aa24.22■■□□□ 1.47
CGREF1-205ENST00000404694 ADGRF5Q8IZF2 1346 aa24.22■■□□□ 1.47
CGREF1-205ENST00000404694 C14orf37Q86TY3 774 aa24.2■■□□□ 1.46
CGREF1-205ENST00000404694 PIK3C2GO75747 1445 aa24.18■■□□□ 1.46
CGREF1-205ENST00000404694 PTCH1Q13635 1447 aa24.17■■□□□ 1.46
CGREF1-205ENST00000404694 PRAG1Q86YV5 1406 aa24.17■■□□□ 1.46
CGREF1-205ENST00000404694 C19orf44Q9H6X5 657 aa24.16■■□□□ 1.46
CGREF1-205ENST00000404694 MYOM2P54296 1465 aa24.16■■□□□ 1.46
CGREF1-205ENST00000404694 NALCNQ8IZF0 1738 aa24.15■■□□□ 1.46
CGREF1-205ENST00000404694 DCCP43146 1447 aa24.15■■□□□ 1.46
CGREF1-205ENST00000404694 SLAIN2Q9P270 581 aa24.15■■□□□ 1.46
CGREF1-205ENST00000404694 NRXN1Q9ULB1 1477 aa24.13■■□□□ 1.45
CGREF1-205ENST00000404694 ASXL1Q8IXJ9 1541 aa24.13■■□□□ 1.45
CGREF1-205ENST00000404694 CADPS2Q86UW7 1296 aa24.13■■□□□ 1.45
CGREF1-205ENST00000404694 ADGRL3Q9HAR2 1447 aa24.13■■□□□ 1.45
CGREF1-205ENST00000404694 ATF3P18847 181 aa24.12■■□□□ 1.45
CGREF1-205ENST00000404694 ROBO2Q9HCK4 1378 aa24.12■■□□□ 1.45
CGREF1-205ENST00000404694 LAMC1P11047 1609 aa24.1■■□□□ 1.45
CGREF1-205ENST00000404694 DISP3Q9P2K9 1392 aa24.1■■□□□ 1.45
CGREF1-205ENST00000404694 KNDC1Q76NI1 1749 aa24.08■■□□□ 1.45
CGREF1-205ENST00000404694 MED1Q15648 1581 aaPredicted RBP24.07■■□□□ 1.44
CGREF1-205ENST00000404694 PHLPP1O60346 1717 aa24.06■■□□□ 1.44
CGREF1-205ENST00000404694 TECPR2O15040 1411 aa24.06■■□□□ 1.44
CGREF1-205ENST00000404694 MST1RQ04912 1400 aa24.05■■□□□ 1.44
CGREF1-205ENST00000404694 LRPPRCP42704 1394 aaKnown RBP24.05■■□□□ 1.44
CGREF1-205ENST00000404694 TMEM132EQ6IEE7 984 aa24.03■■□□□ 1.44
CGREF1-205ENST00000404694 C14orf93Q9H972 538 aaKnown RBP24.03■■□□□ 1.44
CGREF1-205ENST00000404694 YTHDC2Q9H6S0 1430 aaKnown RBP24.02■■□□□ 1.44
CGREF1-205ENST00000404694 COL16A1Q07092 1604 aaPredicted RBP24.02■■□□□ 1.44
CGREF1-205ENST00000404694 ABCC11Q96J66 1382 aa24.02■■□□□ 1.43
CGREF1-205ENST00000404694 AHDC1Q5TGY3 1603 aaPredicted RBP24.01■■□□□ 1.43
CGREF1-205ENST00000404694 CFAP70Q5T0N1 1121 aa24.01■■□□□ 1.43
CGREF1-205ENST00000404694 STK26Q9P289 416 aa24.01■■□□□ 1.43
CGREF1-205ENST00000404694 DHX57Q6P158 1386 aaKnown RBP24■■□□□ 1.43
CGREF1-205ENST00000404694 DCAF11Q8TEB1 546 aa24■■□□□ 1.43
CGREF1-205ENST00000404694 BRINP3Q76B58 766 aa23.99■■□□□ 1.43
CGREF1-205ENST00000404694 CDC42BPGQ6DT37 1551 aa23.98■■□□□ 1.43
CGREF1-205ENST00000404694 KDM2AQ9Y2K7 1162 aa23.97■■□□□ 1.43
CGREF1-205ENST00000404694 ADGRB1O14514 1584 aa23.96■■□□□ 1.43
CGREF1-205ENST00000404694 NHSL1Q5SYE7 1610 aa23.96■■□□□ 1.43
CGREF1-205ENST00000404694 STAC3Q96MF2 364 aa23.95■■□□□ 1.42
CGREF1-205ENST00000404694 C1orf167Q5SNV9 1468 aa23.95■■□□□ 1.42
CGREF1-205ENST00000404694 PLEKHH1Q9ULM0 1364 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms