RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 RIMS2Q9UQ26 1411 aa20.03■□□□□ 0.8
VPREB1-202ENST00000403807 CERKQ8TCT0 537 aa20.03■□□□□ 0.8
VPREB1-202ENST00000403807 NPHP4O75161 1426 aaPredicted RBP20.02■□□□□ 0.8
VPREB1-202ENST00000403807 BCANQ96GW7 911 aa20.02■□□□□ 0.8
VPREB1-202ENST00000403807 MED14O60244 1454 aa20.02■□□□□ 0.8
VPREB1-202ENST00000403807 RPGRIP1LQ68CZ1 1315 aa20.02■□□□□ 0.79
VPREB1-202ENST00000403807 RGL3Q3MIN7 710 aa20.01■□□□□ 0.79
VPREB1-202ENST00000403807 NUTM2DQ5VT03 806 aaPredicted RBP20.01■□□□□ 0.79
VPREB1-202ENST00000403807 ZFYVE9O95405 1425 aa20■□□□□ 0.79
VPREB1-202ENST00000403807 KIF1BO60333 1816 aa19.99■□□□□ 0.79
VPREB1-202ENST00000403807 VGFO15240 615 aaPredicted RBP19.98■□□□□ 0.79
VPREB1-202ENST00000403807 POLR1AO95602 1720 aaPredicted RBP19.98■□□□□ 0.79
VPREB1-202ENST00000403807 MYO5BQ9ULV0 1848 aa19.97■□□□□ 0.79
VPREB1-202ENST00000403807 NEURL4Q96JN8 1562 aa19.97■□□□□ 0.79
VPREB1-202ENST00000403807 DHX57Q6P158 1386 aaKnown RBP19.96■□□□□ 0.79
VPREB1-202ENST00000403807 PLEKHG1Q9ULL1 1385 aa19.95■□□□□ 0.79
VPREB1-202ENST00000403807 SPATA31E1Q6ZUB1 1445 aa19.94■□□□□ 0.78
VPREB1-202ENST00000403807 SLC26A8Q96RN1 970 aa19.93■□□□□ 0.78
VPREB1-202ENST00000403807 SENP3Q9H4L4 574 aaPredicted RBP19.93■□□□□ 0.78
VPREB1-202ENST00000403807 IQGAP1P46940 1657 aa19.92■□□□□ 0.78
VPREB1-202ENST00000403807 TBX22Q9Y458 520 aa19.91■□□□□ 0.78
VPREB1-202ENST00000403807 ZNF335Q9H4Z2 1342 aaPredicted RBP19.9■□□□□ 0.78
VPREB1-202ENST00000403807 NEXMIFQ5QGS0 1516 aa19.89■□□□□ 0.77
VPREB1-202ENST00000403807 NEUROD1Q13562 356 aa19.87■□□□□ 0.77
VPREB1-202ENST00000403807 STAC3Q96MF2 364 aa19.87■□□□□ 0.77
VPREB1-202ENST00000403807 SIN3AQ96ST3 1273 aa19.87■□□□□ 0.77
VPREB1-202ENST00000403807 DCAF11Q8TEB1 546 aa19.85■□□□□ 0.77
VPREB1-202ENST00000403807 ADGRF5Q8IZF2 1346 aa19.84■□□□□ 0.77
VPREB1-202ENST00000403807 KCNA6P17658 529 aa19.84■□□□□ 0.77
VPREB1-202ENST00000403807 KDM2AQ9Y2K7 1162 aa19.84■□□□□ 0.77
VPREB1-202ENST00000403807 ADAMTS13Q76LX8 1427 aa19.84■□□□□ 0.77
VPREB1-202ENST00000403807 PPLO60437 1756 aa19.81■□□□□ 0.76
VPREB1-202ENST00000403807 PIK3R4Q99570 1358 aa19.8■□□□□ 0.76
VPREB1-202ENST00000403807 SETBP1Q9Y6X0 1596 aa19.79■□□□□ 0.76
VPREB1-202ENST00000403807 LTBP4Q8N2S1 1624 aa19.79■□□□□ 0.76
VPREB1-202ENST00000403807 DIP2AQ14689 1571 aa19.78■□□□□ 0.76
VPREB1-202ENST00000403807 CPS1P31327 1500 aa19.77■□□□□ 0.76
VPREB1-202ENST00000403807 AMOTL2Q9Y2J4 779 aa19.77■□□□□ 0.76
VPREB1-202ENST00000403807 CLSPNQ9HAW4 1339 aa19.76■□□□□ 0.75
VPREB1-202ENST00000403807 MYOM2P54296 1465 aa19.76■□□□□ 0.75
VPREB1-202ENST00000403807 CCER1Q8TC90 406 aaPredicted RBP19.76■□□□□ 0.75
VPREB1-202ENST00000403807 L3MBTL2Q969R5 705 aa19.76■□□□□ 0.75
VPREB1-202ENST00000403807 C14orf93Q9H972 538 aaKnown RBP19.76■□□□□ 0.75
VPREB1-202ENST00000403807 METP08581 1390 aa19.75■□□□□ 0.75
VPREB1-202ENST00000403807 PROSER2Q86WR7 435 aaPredicted RBP19.75■□□□□ 0.75
VPREB1-202ENST00000403807 IFT172Q9UG01 1749 aa19.74■□□□□ 0.75
VPREB1-202ENST00000403807 NRXN3Q9Y4C0 1643 aa19.74■□□□□ 0.75
VPREB1-202ENST00000403807 PIK3C2GO75747 1445 aa19.74■□□□□ 0.75
VPREB1-202ENST00000403807 ALKQ9UM73 1620 aa19.73■□□□□ 0.75
VPREB1-202ENST00000403807 CFAP70Q5T0N1 1121 aa19.73■□□□□ 0.75
VPREB1-202ENST00000403807 NRXN1Q9ULB1 1477 aa19.73■□□□□ 0.75
VPREB1-202ENST00000403807 TONSLQ96HA7 1378 aa19.71■□□□□ 0.75
VPREB1-202ENST00000403807 PTPRUQ92729 1446 aa19.7■□□□□ 0.74
VPREB1-202ENST00000403807 TMEM132EQ6IEE7 984 aa19.7■□□□□ 0.74
VPREB1-202ENST00000403807 IQSEC2Q5JU85 1478 aa19.7■□□□□ 0.74
VPREB1-202ENST00000403807 CHD2O14647 1828 aaKnown RBP19.69■□□□□ 0.74
VPREB1-202ENST00000403807 LRRC7Q96NW7 1537 aa19.69■□□□□ 0.74
VPREB1-202ENST00000403807 STRCP1A6NGW2 1772 aa19.69■□□□□ 0.74
VPREB1-202ENST00000403807 NKTRP30414 1462 aaKnown RBP19.68■□□□□ 0.74
VPREB1-202ENST00000403807 NWD1Q149M9 1564 aa19.67■□□□□ 0.74
VPREB1-202ENST00000403807 TMEM94Q12767 1356 aa19.67■□□□□ 0.74
VPREB1-202ENST00000403807 RBM33Q96EV2 1170 aaKnown RBP19.66■□□□□ 0.74
VPREB1-202ENST00000403807 STK26Q9P289 416 aa19.66■□□□□ 0.74
VPREB1-202ENST00000403807 TIMELESSQ9UNS1 1208 aa19.65■□□□□ 0.74
VPREB1-202ENST00000403807 C14orf37Q86TY3 774 aa19.64■□□□□ 0.73
VPREB1-202ENST00000403807 LRPPRCP42704 1394 aaKnown RBP19.64■□□□□ 0.73
VPREB1-202ENST00000403807 PRAG1Q86YV5 1406 aa19.63■□□□□ 0.73
VPREB1-202ENST00000403807 NCOA3Q9Y6Q9 1424 aa19.63■□□□□ 0.73
VPREB1-202ENST00000403807 ABCC11Q96J66 1382 aa19.63■□□□□ 0.73
VPREB1-202ENST00000403807 UBAP1LF5GYI3 381 aa19.63■□□□□ 0.73
VPREB1-202ENST00000403807 TOM1O60784 492 aa19.63■□□□□ 0.73
VPREB1-202ENST00000403807 SETD1AO15047 1707 aaKnown RBP19.62■□□□□ 0.73
VPREB1-202ENST00000403807 YTHDC2Q9H6S0 1430 aaKnown RBP19.61■□□□□ 0.73
VPREB1-202ENST00000403807 SIRT1Q96EB6 747 aa19.61■□□□□ 0.73
VPREB1-202ENST00000403807 LAMC1P11047 1609 aa19.61■□□□□ 0.73
VPREB1-202ENST00000403807 C19orf44Q9H6X5 657 aa19.6■□□□□ 0.73
VPREB1-202ENST00000403807 XRN1Q8IZH2 1706 aaKnown RBP19.59■□□□□ 0.73
VPREB1-202ENST00000403807 MSH6P52701 1360 aa19.59■□□□□ 0.73
VPREB1-202ENST00000403807 PTCH1Q13635 1447 aa19.59■□□□□ 0.73
VPREB1-202ENST00000403807 ROBO2Q9HCK4 1378 aa19.58■□□□□ 0.73
VPREB1-202ENST00000403807 NBPF1Q3BBV0 1214 aa19.58■□□□□ 0.72
VPREB1-202ENST00000403807 TRAK1Q9UPV9 953 aa19.58■□□□□ 0.72
VPREB1-202ENST00000403807 ASXL1Q8IXJ9 1541 aa19.57■□□□□ 0.72
VPREB1-202ENST00000403807 NBPF8Q3BBV2 869 aa19.57■□□□□ 0.72
VPREB1-202ENST00000403807 WAPLQ7Z5K2 1190 aa19.57■□□□□ 0.72
VPREB1-202ENST00000403807 TECPR2O15040 1411 aa19.57■□□□□ 0.72
VPREB1-202ENST00000403807 DISP3Q9P2K9 1392 aa19.56■□□□□ 0.72
VPREB1-202ENST00000403807 ADGRB1O14514 1584 aa19.55■□□□□ 0.72
VPREB1-202ENST00000403807 ATF3P18847 181 aa19.55■□□□□ 0.72
VPREB1-202ENST00000403807 POGKQ9P215 609 aa19.55■□□□□ 0.72
VPREB1-202ENST00000403807 CADPS2Q86UW7 1296 aa19.54■□□□□ 0.72
VPREB1-202ENST00000403807 FAM135BQ49AJ0 1406 aa19.53■□□□□ 0.72
VPREB1-202ENST00000403807 PRAM1Q96QH2 718 aa19.53■□□□□ 0.72
VPREB1-202ENST00000403807 KIAA1210Q9ULL0 1709 aa19.53■□□□□ 0.72
VPREB1-202ENST00000403807 PIP4K2BP78356 416 aa19.52■□□□□ 0.72
VPREB1-202ENST00000403807 XIRP1Q702N8 1843 aaKnown RBP19.52■□□□□ 0.72
VPREB1-202ENST00000403807 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
VPREB1-202ENST00000403807 ROCK2O75116 1388 aaKnown RBP19.51■□□□□ 0.71
VPREB1-202ENST00000403807 PLEKHH1Q9ULM0 1364 aa19.5■□□□□ 0.71
VPREB1-202ENST00000403807 SLAIN2Q9P270 581 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms