RNA–Protein interactions for RNA: ENST00000403160.4

COPS9-202, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-202ENST00000403160 RAB3GAP2Q9H2M9 1393 aa23.91■■□□□ 1.42
COPS9-202ENST00000403160 HSPA1LP34931 641 aa23.91■■□□□ 1.42
COPS9-202ENST00000403160 HFM1A2PYH4 1435 aa23.9■■□□□ 1.42
COPS9-202ENST00000403160 LRRC7Q96NW7 1537 aa23.86■■□□□ 1.41
COPS9-202ENST00000403160 MYO5BQ9ULV0 1848 aa23.85■■□□□ 1.41
COPS9-202ENST00000403160 TMEM131LA2VDJ0 1609 aa23.84■■□□□ 1.41
COPS9-202ENST00000403160 STRCP1A6NGW2 1772 aa23.83■■□□□ 1.41
COPS9-202ENST00000403160 CHGAP10645 457 aaKnown RBP23.83■■□□□ 1.41
COPS9-202ENST00000403160 TRIM52Q96A61 297 aa23.82■■□□□ 1.4
COPS9-202ENST00000403160 SPHKAPQ2M3C7 1700 aa23.81■■□□□ 1.4
COPS9-202ENST00000403160 ALKQ9UM73 1620 aa23.8■■□□□ 1.4
COPS9-202ENST00000403160 DHX57Q6P158 1386 aaKnown RBP23.79■■□□□ 1.4
COPS9-202ENST00000403160 ZEB1P37275 1124 aaPredicted RBP23.79■■□□□ 1.4
COPS9-202ENST00000403160 HDGFP51858 240 aaKnown RBP23.79■■□□□ 1.4
COPS9-202ENST00000403160 ZFYVE9O95405 1425 aa23.77■■□□□ 1.4
COPS9-202ENST00000403160 RIMS2Q9UQ26 1411 aa23.77■■□□□ 1.4
COPS9-202ENST00000403160 BCANQ96GW7 911 aa23.77■■□□□ 1.4
COPS9-202ENST00000403160 PPP1R15AO75807 674 aaPredicted RBP23.76■■□□□ 1.39
COPS9-202ENST00000403160 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.73■■□□□ 1.39
COPS9-202ENST00000403160 SLC26A8Q96RN1 970 aa23.73■■□□□ 1.39
COPS9-202ENST00000403160 MED1Q15648 1581 aaPredicted RBP23.73■■□□□ 1.39
COPS9-202ENST00000403160 SLC4A1APQ9BWU0 796 aaKnown RBP23.72■■□□□ 1.39
COPS9-202ENST00000403160 PLEKHG1Q9ULL1 1385 aa23.72■■□□□ 1.39
COPS9-202ENST00000403160 TRPM2O94759 1503 aa23.71■■□□□ 1.39
COPS9-202ENST00000403160 KCNA6P17658 529 aa23.71■■□□□ 1.39
COPS9-202ENST00000403160 SENP3Q9H4L4 574 aaPredicted RBP23.71■■□□□ 1.39
COPS9-202ENST00000403160 CLTCL1P53675 1640 aa23.69■■□□□ 1.38
COPS9-202ENST00000403160 NUTM2DQ5VT03 806 aaPredicted RBP23.68■■□□□ 1.38
COPS9-202ENST00000403160 ZNF326Q5BKZ1 582 aaKnown RBP23.66■■□□□ 1.38
COPS9-202ENST00000403160 PROSER2Q86WR7 435 aaPredicted RBP23.65■■□□□ 1.38
COPS9-202ENST00000403160 PHF23Q9BUL5 403 aaPredicted RBP23.65■■□□□ 1.38
COPS9-202ENST00000403160 XIRP1Q702N8 1843 aaKnown RBP23.65■■□□□ 1.38
COPS9-202ENST00000403160 TMEM94Q12767 1356 aa23.65■■□□□ 1.38
COPS9-202ENST00000403160 KIF1BO60333 1816 aa23.64■■□□□ 1.38
COPS9-202ENST00000403160 CLSPNQ9HAW4 1339 aa23.62■■□□□ 1.37
COPS9-202ENST00000403160 FAM135BQ49AJ0 1406 aa23.62■■□□□ 1.37
COPS9-202ENST00000403160 ACIN1Q9UKV3 1341 aaKnown RBP23.61■■□□□ 1.37
COPS9-202ENST00000403160 NWD1Q149M9 1564 aa23.61■■□□□ 1.37
COPS9-202ENST00000403160 TBX22Q9Y458 520 aa23.61■■□□□ 1.37
COPS9-202ENST00000403160 DIP2AQ14689 1571 aa23.6■■□□□ 1.37
COPS9-202ENST00000403160 MPHOSPH9Q99550 1183 aa23.59■■□□□ 1.37
COPS9-202ENST00000403160 NKTRP30414 1462 aaKnown RBP23.59■■□□□ 1.37
COPS9-202ENST00000403160 CHD2O14647 1828 aaKnown RBP23.59■■□□□ 1.37
COPS9-202ENST00000403160 ADAMTS13Q76LX8 1427 aa23.59■■□□□ 1.37
COPS9-202ENST00000403160 FOXD1Q16676 465 aa23.58■■□□□ 1.37
COPS9-202ENST00000403160 NEXMIFQ5QGS0 1516 aa23.55■■□□□ 1.36
COPS9-202ENST00000403160 SETBP1Q9Y6X0 1596 aa23.53■■□□□ 1.36
COPS9-202ENST00000403160 RBM33Q96EV2 1170 aaKnown RBP23.53■■□□□ 1.36
COPS9-202ENST00000403160 MSH6P52701 1360 aa23.52■■□□□ 1.36
COPS9-202ENST00000403160 PIK3R4Q99570 1358 aa23.52■■□□□ 1.36
COPS9-202ENST00000403160 NRXN3Q9Y4C0 1643 aa23.51■■□□□ 1.35
COPS9-202ENST00000403160 CCDC144AA2RUR9 1427 aa23.51■■□□□ 1.35
COPS9-202ENST00000403160 RPGRIP1LQ68CZ1 1315 aa23.49■■□□□ 1.35
COPS9-202ENST00000403160 SLAIN2Q9P270 581 aa23.48■■□□□ 1.35
COPS9-202ENST00000403160 NCOA3Q9Y6Q9 1424 aa23.48■■□□□ 1.35
COPS9-202ENST00000403160 VGFO15240 615 aaPredicted RBP23.47■■□□□ 1.35
COPS9-202ENST00000403160 AMOTL2Q9Y2J4 779 aa23.46■■□□□ 1.35
COPS9-202ENST00000403160 ROBO1Q9Y6N7 1651 aa23.46■■□□□ 1.35
COPS9-202ENST00000403160 PPLO60437 1756 aa23.45■■□□□ 1.34
COPS9-202ENST00000403160 PTPRUQ92729 1446 aa23.43■■□□□ 1.34
COPS9-202ENST00000403160 C14orf37Q86TY3 774 aa23.43■■□□□ 1.34
COPS9-202ENST00000403160 METP08581 1390 aa23.42■■□□□ 1.34
COPS9-202ENST00000403160 RGS17Q9UGC6 210 aaPredicted RBP23.42■■□□□ 1.34
COPS9-202ENST00000403160 RGL3Q3MIN7 710 aa23.41■■□□□ 1.34
COPS9-202ENST00000403160 XRN1Q8IZH2 1706 aaKnown RBP23.41■■□□□ 1.34
COPS9-202ENST00000403160 SPATA31E1Q6ZUB1 1445 aa23.4■■□□□ 1.34
COPS9-202ENST00000403160 C19orf44Q9H6X5 657 aa23.39■■□□□ 1.33
COPS9-202ENST00000403160 CADPS2Q86UW7 1296 aa23.38■■□□□ 1.33
COPS9-202ENST00000403160 SIN3AQ96ST3 1273 aa23.37■■□□□ 1.33
COPS9-202ENST00000403160 ATF3P18847 181 aa23.35■■□□□ 1.33
COPS9-202ENST00000403160 SETD1AO15047 1707 aaKnown RBP23.35■■□□□ 1.33
COPS9-202ENST00000403160 ANKRD30BQ9BXX2 1392 aa23.35■■□□□ 1.33
COPS9-202ENST00000403160 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.34■■□□□ 1.33
COPS9-202ENST00000403160 IFT172Q9UG01 1749 aa23.34■■□□□ 1.33
COPS9-202ENST00000403160 JCADQ9P266 1359 aa23.34■■□□□ 1.33
COPS9-202ENST00000403160 NEUROD1Q13562 356 aa23.33■■□□□ 1.33
COPS9-202ENST00000403160 PHLPP1O60346 1717 aa23.33■■□□□ 1.32
COPS9-202ENST00000403160 ADGRF5Q8IZF2 1346 aa23.32■■□□□ 1.32
COPS9-202ENST00000403160 POTEAQ6S8J7 498 aa23.28■■□□□ 1.32
COPS9-202ENST00000403160 DCCP43146 1447 aa23.26■■□□□ 1.31
COPS9-202ENST00000403160 PTCH1Q13635 1447 aa23.26■■□□□ 1.31
COPS9-202ENST00000403160 SPATA31A6Q5VVP1 1343 aa23.25■■□□□ 1.31
COPS9-202ENST00000403160 COL16A1Q07092 1604 aaPredicted RBP23.25■■□□□ 1.31
COPS9-202ENST00000403160 PIK3C2GO75747 1445 aa23.25■■□□□ 1.31
COPS9-202ENST00000403160 ADGRL3Q9HAR2 1447 aa23.25■■□□□ 1.31
COPS9-202ENST00000403160 ROBO2Q9HCK4 1378 aa23.24■■□□□ 1.31
COPS9-202ENST00000403160 NALCNQ8IZF0 1738 aa23.23■■□□□ 1.31
COPS9-202ENST00000403160 PRAG1Q86YV5 1406 aa23.23■■□□□ 1.31
COPS9-202ENST00000403160 AHDC1Q5TGY3 1603 aaPredicted RBP23.22■■□□□ 1.31
COPS9-202ENST00000403160 MYOM2P54296 1465 aa23.21■■□□□ 1.31
COPS9-202ENST00000403160 TONSLQ96HA7 1378 aa23.2■■□□□ 1.3
COPS9-202ENST00000403160 BRINP3Q76B58 766 aa23.2■■□□□ 1.3
COPS9-202ENST00000403160 TIMELESSQ9UNS1 1208 aa23.2■■□□□ 1.3
COPS9-202ENST00000403160 NRXN1Q9ULB1 1477 aa23.18■■□□□ 1.3
COPS9-202ENST00000403160 MST1RQ04912 1400 aa23.17■■□□□ 1.3
COPS9-202ENST00000403160 TMEM132EQ6IEE7 984 aa23.17■■□□□ 1.3
COPS9-202ENST00000403160 STK26Q9P289 416 aa23.17■■□□□ 1.3
COPS9-202ENST00000403160 LRPPRCP42704 1394 aaKnown RBP23.16■■□□□ 1.3
COPS9-202ENST00000403160 LAMC1P11047 1609 aa23.16■■□□□ 1.3
COPS9-202ENST00000403160 MEX3CQ5U5Q3 659 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms