RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 IBTKQ9P2D0 1353 aaPredicted RBP10.89□□□□□ -0.67
RETREG1-202ENST00000399793 FYCO1Q9BQS8 1478 aa10.89□□□□□ -0.67
RETREG1-202ENST00000399793 RTEL1-TNFRSF6BF6WH68 1400 aa10.89□□□□□ -0.67
RETREG1-202ENST00000399793 NCOA3Q9Y6Q9 1424 aa10.89□□□□□ -0.67
RETREG1-202ENST00000399793 VGFO15240 615 aaPredicted RBP10.89□□□□□ -0.67
RETREG1-202ENST00000399793 IRX3P78415 501 aaPredicted RBP10.89□□□□□ -0.67
RETREG1-202ENST00000399793 ZNF771Q7L3S4 317 aaPredicted RBP10.89□□□□□ -0.67
RETREG1-202ENST00000399793 CTTNBP2Q8WZ74 1663 aa10.88□□□□□ -0.67
RETREG1-202ENST00000399793 RAB3GAP1Q15042 981 aa10.88□□□□□ -0.67
RETREG1-202ENST00000399793 INSRP06213 1382 aa10.88□□□□□ -0.67
RETREG1-202ENST00000399793 KCNJ4P48050 445 aa10.88□□□□□ -0.67
RETREG1-202ENST00000399793 RGS22Q8NE09 1264 aa10.87□□□□□ -0.67
RETREG1-202ENST00000399793 ZBTB7CA1YPR0 619 aa10.87□□□□□ -0.67
RETREG1-202ENST00000399793 RBSNQ9H1K0 784 aa10.87□□□□□ -0.67
RETREG1-202ENST00000399793 DDX49Q9Y6V7 483 aaKnown RBP10.87□□□□□ -0.67
RETREG1-202ENST00000399793 MTUS2Q5JR59 1369 aa10.86□□□□□ -0.67
RETREG1-202ENST00000399793 FAM177BA6PVY3 158 aa10.86□□□□□ -0.67
RETREG1-202ENST00000399793 BRD2P25440 801 aaKnown RBP10.86□□□□□ -0.67
RETREG1-202ENST00000399793 MFAP1P55081 439 aaKnown RBP10.86□□□□□ -0.67
RETREG1-202ENST00000399793 CIZ1Q9ULV3 898 aaPredicted RBP10.86□□□□□ -0.67
RETREG1-202ENST00000399793 KIF21AQ7Z4S6 1674 aa10.86□□□□□ -0.67
RETREG1-202ENST00000399793 PLEKHH1Q9ULM0 1364 aa10.86□□□□□ -0.67
RETREG1-202ENST00000399793 E9PCH4 1651 aa10.86□□□□□ -0.67
RETREG1-202ENST00000399793 BCAR3O75815 825 aa10.86□□□□□ -0.67
RETREG1-202ENST00000399793 KLHL40Q2TBA0 621 aa10.86□□□□□ -0.67
RETREG1-202ENST00000399793 NBPF1Q3BBV0 1214 aa10.86□□□□□ -0.67
RETREG1-202ENST00000399793 CERS3Q8IU89 383 aa10.86□□□□□ -0.67
RETREG1-202ENST00000399793 CASKIN1Q8WXD9 1431 aa10.86□□□□□ -0.67
RETREG1-202ENST00000399793 FHOD3Q2V2M9 1422 aa10.85□□□□□ -0.67
RETREG1-202ENST00000399793 ZNF445P59923 1031 aa10.85□□□□□ -0.67
RETREG1-202ENST00000399793 CLUAP1Q96AJ1 413 aa10.85□□□□□ -0.67
RETREG1-202ENST00000399793 CCDC39Q9UFE4 941 aa10.85□□□□□ -0.67
RETREG1-202ENST00000399793 SCAPERQ9BY12 1400 aa10.85□□□□□ -0.67
RETREG1-202ENST00000399793 GTF2F1P35269 517 aaKnown RBP eCLIP10.85□□□□□ -0.67
RETREG1-202ENST00000399793 GOLGA2Q08379 1002 aa10.85□□□□□ -0.67
RETREG1-202ENST00000399793 SMC5Q8IY18 1101 aa10.85□□□□□ -0.67
RETREG1-202ENST00000399793 DHX37Q8IY37 1157 aaKnown RBP10.85□□□□□ -0.67
RETREG1-202ENST00000399793 DNAJC2Q99543 621 aaKnown RBP10.85□□□□□ -0.67
RETREG1-202ENST00000399793 SLC20A2Q08357 652 aa10.84□□□□□ -0.67
RETREG1-202ENST00000399793 PRIMPOLQ96LW4 560 aa10.84□□□□□ -0.67
RETREG1-202ENST00000399793 RBM25P49756 843 aaKnown RBP10.84□□□□□ -0.67
RETREG1-202ENST00000399793 CGNL1Q0VF96 1302 aa10.84□□□□□ -0.67
RETREG1-202ENST00000399793 PDCL2Q8N4E4 241 aa10.84□□□□□ -0.67
RETREG1-202ENST00000399793 PDZRN3Q9UPQ7 1066 aa10.84□□□□□ -0.67
RETREG1-202ENST00000399793 ZMYM3Q14202 1370 aa10.84□□□□□ -0.67
RETREG1-202ENST00000399793 HMGN5P82970 282 aaKnown RBP10.83□□□□□ -0.68
RETREG1-202ENST00000399793 ADAMTS8Q9UP79 889 aa10.83□□□□□ -0.68
RETREG1-202ENST00000399793 MBD5Q9P267 1494 aa10.83□□□□□ -0.68
RETREG1-202ENST00000399793 GOLGA6L22H0YM25 854 aa10.83□□□□□ -0.68
RETREG1-202ENST00000399793 HSP90AB1P08238 724 aaKnown RBP10.83□□□□□ -0.68
RETREG1-202ENST00000399793 U2AF2P26368 475 aaKnown RBP eCLIP10.83□□□□□ -0.68
RETREG1-202ENST00000399793 KIAA2012Q0VF49 1180 aa10.82□□□□□ -0.68
RETREG1-202ENST00000399793 KIF3AQ9Y496 699 aa10.82□□□□□ -0.68
RETREG1-202ENST00000399793 KIF14Q15058 1648 aa10.82□□□□□ -0.68
RETREG1-202ENST00000399793 ZSCAN23Q3MJ62 389 aa10.82□□□□□ -0.68
RETREG1-202ENST00000399793 BCL2L12Q9HB09 334 aa10.82□□□□□ -0.68
RETREG1-202ENST00000399793 COG6Q9Y2V7 657 aa10.82□□□□□ -0.68
RETREG1-202ENST00000399793 CCDC144AA2RUR9 1427 aa10.82□□□□□ -0.68
RETREG1-202ENST00000399793 ZNF521Q96K83 1311 aa10.82□□□□□ -0.68
RETREG1-202ENST00000399793 ST20-MTHFSA0A0A6YYL1 179 aa10.82□□□□□ -0.68
RETREG1-202ENST00000399793 PRIM1P49642 420 aaKnown RBP10.82□□□□□ -0.68
RETREG1-202ENST00000399793 SLFN5Q08AF3 891 aa10.82□□□□□ -0.68
RETREG1-202ENST00000399793 SSFA2P28290 1259 aa10.81□□□□□ -0.68
RETREG1-202ENST00000399793 CC2D1BQ5T0F9 858 aaKnown RBP10.81□□□□□ -0.68
RETREG1-202ENST00000399793 CAVIN1Q6NZI2 390 aaKnown RBP10.81□□□□□ -0.68
RETREG1-202ENST00000399793 AEBP1Q8IUX7 1158 aa10.81□□□□□ -0.68
RETREG1-202ENST00000399793 FOXD4L1Q9NU39 408 aa10.81□□□□□ -0.68
RETREG1-202ENST00000399793 IGF1RP08069 1367 aa10.81□□□□□ -0.68
RETREG1-202ENST00000399793 PANK1Q8TE04 598 aa10.81□□□□□ -0.68
RETREG1-202ENST00000399793 SNX21Q969T3 373 aa10.8□□□□□ -0.68
RETREG1-202ENST00000399793 CARD11Q9BXL7 1154 aa10.8□□□□□ -0.68
RETREG1-202ENST00000399793 ZNF608Q9ULD9 1512 aaPredicted RBP10.8□□□□□ -0.68
RETREG1-202ENST00000399793 PER1O15534 1290 aaPredicted RBP10.8□□□□□ -0.68
RETREG1-202ENST00000399793 PDE3AQ14432 1141 aa10.8□□□□□ -0.68
RETREG1-202ENST00000399793 SLC4A1APQ9BWU0 796 aaKnown RBP10.8□□□□□ -0.68
RETREG1-202ENST00000399793 FGD5Q6ZNL6 1462 aa10.79□□□□□ -0.68
RETREG1-202ENST00000399793 BAG4O95429 457 aaKnown RBP10.79□□□□□ -0.68
RETREG1-202ENST00000399793 PMFBP1Q8TBY8 1022 aa10.79□□□□□ -0.68
RETREG1-202ENST00000399793 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.79□□□□□ -0.68
RETREG1-202ENST00000399793 CFTRP13569 1480 aa10.78□□□□□ -0.68
RETREG1-202ENST00000399793 TIGD1Q96MW7 591 aa10.78□□□□□ -0.68
RETREG1-202ENST00000399793 CARMIL1Q5VZK9 1371 aa10.78□□□□□ -0.68
RETREG1-202ENST00000399793 PTMAP06454 111 aaKnown RBP10.78□□□□□ -0.68
RETREG1-202ENST00000399793 TRMT2AQ8IZ69 625 aaKnown RBP10.78□□□□□ -0.68
RETREG1-202ENST00000399793 RNF216Q9NWF9 866 aaPredicted RBP10.78□□□□□ -0.68
RETREG1-202ENST00000399793 PCDHB15Q9Y5E8 787 aa10.78□□□□□ -0.68
RETREG1-202ENST00000399793 CCDC66A2RUB6 948 aa10.78□□□□□ -0.68
RETREG1-202ENST00000399793 SLFN14P0C7P3 912 aa10.78□□□□□ -0.68
RETREG1-202ENST00000399793 CAPN2P17655 700 aa10.78□□□□□ -0.68
RETREG1-202ENST00000399793 GABPB1Q06547 395 aaPredicted RBP10.78□□□□□ -0.68
RETREG1-202ENST00000399793 CLEC17AQ6ZS10 378 aa10.78□□□□□ -0.68
RETREG1-202ENST00000399793 FEZ1Q99689 392 aa10.78□□□□□ -0.68
RETREG1-202ENST00000399793 SPINK5Q9NQ38 1064 aaPredicted RBP10.78□□□□□ -0.68
RETREG1-202ENST00000399793 OGFRQ9NZT2 677 aa10.77□□□□□ -0.69
RETREG1-202ENST00000399793 NKTRP30414 1462 aaKnown RBP10.77□□□□□ -0.69
RETREG1-202ENST00000399793 AK9Q5TCS8 1911 aa10.77□□□□□ -0.69
RETREG1-202ENST00000399793 TRIM6-TRIM34B2RNG4 842 aa10.77□□□□□ -0.69
RETREG1-202ENST00000399793 ZBTB9Q96C00 473 aa10.77□□□□□ -0.69
RETREG1-202ENST00000399793 TRIM34Q9BYJ4 488 aa10.77□□□□□ -0.69
RETREG1-202ENST00000399793 NOLC1Q14978 699 aaKnown RBP eCLIP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms