RNA–Protein interactions for RNA: ENST00000399237.6

RUNX1-204, Transcript of runt related transcription factor 1, humanhuman

TSL 5

Gene RUNX1, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-204ENST00000399237 ZFYVE9O95405 1425 aa32.47■■■□□ 2.79
RUNX1-204ENST00000399237 EID1Q9Y6B2 187 aa32.46■■■□□ 2.79
RUNX1-204ENST00000399237 ALKQ9UM73 1620 aa32.44■■■□□ 2.78
RUNX1-204ENST00000399237 XIRP1Q702N8 1843 aaKnown RBP32.39■■■□□ 2.78
RUNX1-204ENST00000399237 RIMS2Q9UQ26 1411 aa32.38■■■□□ 2.77
RUNX1-204ENST00000399237 SOCS7O14512 581 aa32.36■■■□□ 2.77
RUNX1-204ENST00000399237 CLTCL1P53675 1640 aa32.36■■■□□ 2.77
RUNX1-204ENST00000399237 TRPM2O94759 1503 aa32.32■■■□□ 2.76
RUNX1-204ENST00000399237 CHGAP10645 457 aaKnown RBP32.31■■■□□ 2.76
RUNX1-204ENST00000399237 SLC26A8Q96RN1 970 aa32.31■■■□□ 2.76
RUNX1-204ENST00000399237 SENP3Q9H4L4 574 aaPredicted RBP32.31■■■□□ 2.76
RUNX1-204ENST00000399237 PLEKHG1Q9ULL1 1385 aa32.3■■■□□ 2.76
RUNX1-204ENST00000399237 NWD1Q149M9 1564 aa32.28■■■□□ 2.76
RUNX1-204ENST00000399237 MED1Q15648 1581 aaPredicted RBP32.26■■■□□ 2.75
RUNX1-204ENST00000399237 NUTM2DQ5VT03 806 aaPredicted RBP32.25■■■□□ 2.75
RUNX1-204ENST00000399237 TRIM52Q96A61 297 aa32.25■■■□□ 2.75
RUNX1-204ENST00000399237 CHD2O14647 1828 aaKnown RBP32.22■■■□□ 2.75
RUNX1-204ENST00000399237 ADAMTS13Q76LX8 1427 aa32.22■■■□□ 2.75
RUNX1-204ENST00000399237 NRXN3Q9Y4C0 1643 aa32.21■■■□□ 2.75
RUNX1-204ENST00000399237 KCNA6P17658 529 aa32.19■■■□□ 2.74
RUNX1-204ENST00000399237 KIF1BO60333 1816 aa32.19■■■□□ 2.74
RUNX1-204ENST00000399237 TMEM94Q12767 1356 aa32.19■■■□□ 2.74
RUNX1-204ENST00000399237 PPP1R15AO75807 674 aaPredicted RBP32.18■■■□□ 2.74
RUNX1-204ENST00000399237 BCANQ96GW7 911 aa32.18■■■□□ 2.74
RUNX1-204ENST00000399237 NEXMIFQ5QGS0 1516 aa32.17■■■□□ 2.74
RUNX1-204ENST00000399237 SLC4A1APQ9BWU0 796 aaKnown RBP32.16■■■□□ 2.74
RUNX1-204ENST00000399237 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.15■■■□□ 2.74
RUNX1-204ENST00000399237 NKTRP30414 1462 aaKnown RBP32.15■■■□□ 2.74
RUNX1-204ENST00000399237 DIP2AQ14689 1571 aa32.15■■■□□ 2.74
RUNX1-204ENST00000399237 RBM33Q96EV2 1170 aaKnown RBP32.14■■■□□ 2.74
RUNX1-204ENST00000399237 FOXD1Q16676 465 aa32.13■■■□□ 2.73
RUNX1-204ENST00000399237 HDGFP51858 240 aaKnown RBP32.11■■■□□ 2.73
RUNX1-204ENST00000399237 PROSER2Q86WR7 435 aaPredicted RBP32.11■■■□□ 2.73
RUNX1-204ENST00000399237 SETBP1Q9Y6X0 1596 aa32.11■■■□□ 2.73
RUNX1-204ENST00000399237 TBX22Q9Y458 520 aa32.09■■■□□ 2.73
RUNX1-204ENST00000399237 SETD5Q9C0A6 1442 aa32.09■■■□□ 2.73
RUNX1-204ENST00000399237 PHF23Q9BUL5 403 aaPredicted RBP32.07■■■□□ 2.72
RUNX1-204ENST00000399237 PTPRUQ92729 1446 aa32.06■■■□□ 2.72
RUNX1-204ENST00000399237 ZNF326Q5BKZ1 582 aaKnown RBP32.05■■■□□ 2.72
RUNX1-204ENST00000399237 FAM135BQ49AJ0 1406 aa32.04■■■□□ 2.72
RUNX1-204ENST00000399237 MPHOSPH9Q99550 1183 aa32.02■■■□□ 2.72
RUNX1-204ENST00000399237 PPLO60437 1756 aa32.02■■■□□ 2.72
RUNX1-204ENST00000399237 XRN1Q8IZH2 1706 aaKnown RBP32.01■■■□□ 2.72
RUNX1-204ENST00000399237 RAB3GAP2Q9H2M9 1393 aa32.01■■■□□ 2.71
RUNX1-204ENST00000399237 SETD1AO15047 1707 aaKnown RBP32■■■□□ 2.71
RUNX1-204ENST00000399237 MSH6P52701 1360 aa31.98■■■□□ 2.71
RUNX1-204ENST00000399237 PIK3R4Q99570 1358 aa31.98■■■□□ 2.71
RUNX1-204ENST00000399237 METP08581 1390 aa31.94■■■□□ 2.7
RUNX1-204ENST00000399237 ROBO1Q9Y6N7 1651 aa31.94■■■□□ 2.7
RUNX1-204ENST00000399237 IFT172Q9UG01 1749 aa31.93■■■□□ 2.7
RUNX1-204ENST00000399237 SPATA31E1Q6ZUB1 1445 aa31.92■■■□□ 2.7
RUNX1-204ENST00000399237 CCDC144AA2RUR9 1427 aa31.91■■■□□ 2.7
RUNX1-204ENST00000399237 AMOTL2Q9Y2J4 779 aa31.89■■■□□ 2.7
RUNX1-204ENST00000399237 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.89■■■□□ 2.69
RUNX1-204ENST00000399237 SLAIN2Q9P270 581 aa31.87■■■□□ 2.69
RUNX1-204ENST00000399237 NCOA3Q9Y6Q9 1424 aa31.84■■■□□ 2.69
RUNX1-204ENST00000399237 C14orf37Q86TY3 774 aa31.84■■■□□ 2.69
RUNX1-204ENST00000399237 RPGRIP1LQ68CZ1 1315 aa31.83■■■□□ 2.69
RUNX1-204ENST00000399237 RGS17Q9UGC6 210 aaPredicted RBP31.81■■■□□ 2.68
RUNX1-204ENST00000399237 VGFO15240 615 aaPredicted RBP31.79■■■□□ 2.68
RUNX1-204ENST00000399237 NALCNQ8IZF0 1738 aa31.78■■■□□ 2.68
RUNX1-204ENST00000399237 ADGRF5Q8IZF2 1346 aa31.77■■■□□ 2.68
RUNX1-204ENST00000399237 ACIN1Q9UKV3 1341 aaKnown RBP31.77■■■□□ 2.68
RUNX1-204ENST00000399237 RGL3Q3MIN7 710 aa31.77■■■□□ 2.68
RUNX1-204ENST00000399237 ASXL1Q8IXJ9 1541 aa31.74■■■□□ 2.67
RUNX1-204ENST00000399237 C19orf44Q9H6X5 657 aa31.73■■■□□ 2.67
RUNX1-204ENST00000399237 CADPS2Q86UW7 1296 aa31.72■■■□□ 2.67
RUNX1-204ENST00000399237 PHLPP1O60346 1717 aa31.72■■■□□ 2.67
RUNX1-204ENST00000399237 ATF3P18847 181 aa31.71■■■□□ 2.67
RUNX1-204ENST00000399237 PRAG1Q86YV5 1406 aa31.71■■■□□ 2.67
RUNX1-204ENST00000399237 ANKRD30BQ9BXX2 1392 aa31.7■■■□□ 2.67
RUNX1-204ENST00000399237 ROBO2Q9HCK4 1378 aa31.69■■■□□ 2.66
RUNX1-204ENST00000399237 JCADQ9P266 1359 aa31.69■■■□□ 2.66
RUNX1-204ENST00000399237 PTCH1Q13635 1447 aa31.69■■■□□ 2.66
RUNX1-204ENST00000399237 PIK3C2GO75747 1445 aa31.68■■■□□ 2.66
RUNX1-204ENST00000399237 DCCP43146 1447 aa31.67■■■□□ 2.66
RUNX1-204ENST00000399237 ADGRL3Q9HAR2 1447 aa31.67■■■□□ 2.66
RUNX1-204ENST00000399237 HRCP23327 699 aa31.67■■■□□ 2.66
RUNX1-204ENST00000399237 COL16A1Q07092 1604 aaPredicted RBP31.65■■■□□ 2.66
RUNX1-204ENST00000399237 NRXN1Q9ULB1 1477 aa31.64■■■□□ 2.66
RUNX1-204ENST00000399237 POTEAQ6S8J7 498 aa31.63■■■□□ 2.65
RUNX1-204ENST00000399237 MST1RQ04912 1400 aa31.63■■■□□ 2.65
RUNX1-204ENST00000399237 MYOM2P54296 1465 aa31.62■■■□□ 2.65
RUNX1-204ENST00000399237 AHDC1Q5TGY3 1603 aaPredicted RBP31.6■■■□□ 2.65
RUNX1-204ENST00000399237 KNDC1Q76NI1 1749 aa31.59■■■□□ 2.65
RUNX1-204ENST00000399237 BRINP3Q76B58 766 aa31.58■■■□□ 2.65
RUNX1-204ENST00000399237 TECPR2O15040 1411 aa31.55■■■□□ 2.64
RUNX1-204ENST00000399237 NHSL1Q5SYE7 1610 aa31.54■■■□□ 2.64
RUNX1-204ENST00000399237 LRP6O75581 1613 aa31.53■■■□□ 2.64
RUNX1-204ENST00000399237 TMEM132EQ6IEE7 984 aa31.53■■■□□ 2.64
RUNX1-204ENST00000399237 LAMC1P11047 1609 aa31.53■■■□□ 2.64
RUNX1-204ENST00000399237 SPATA31A6Q5VVP1 1343 aa31.52■■■□□ 2.64
RUNX1-204ENST00000399237 LRPPRCP42704 1394 aaKnown RBP31.52■■■□□ 2.64
RUNX1-204ENST00000399237 PLEKHH1Q9ULM0 1364 aa31.48■■■□□ 2.63
RUNX1-204ENST00000399237 STK26Q9P289 416 aa31.48■■■□□ 2.63
RUNX1-204ENST00000399237 YTHDC2Q9H6S0 1430 aaKnown RBP31.48■■■□□ 2.63
RUNX1-204ENST00000399237 C1orf167Q5SNV9 1468 aa31.47■■■□□ 2.63
RUNX1-204ENST00000399237 CFAP70Q5T0N1 1121 aa31.47■■■□□ 2.63
RUNX1-204ENST00000399237 MEX3CQ5U5Q3 659 aaKnown RBP31.47■■■□□ 2.63
RUNX1-204ENST00000399237 C14orf93Q9H972 538 aaKnown RBP31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms