RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 PTCH1Q13635 1447 aa5.64□□□□□ -1.51
FNDC3A-202ENST00000398316 QRICH2Q9H0J4 1663 aa5.64□□□□□ -1.51
FNDC3A-202ENST00000398316 RPGRIP1LQ68CZ1 1315 aa5.64□□□□□ -1.51
FNDC3A-202ENST00000398316 MED1Q15648 1581 aaPredicted RBP5.63□□□□□ -1.51
FNDC3A-202ENST00000398316 NHSL1Q5SYE7 1610 aa5.63□□□□□ -1.51
FNDC3A-202ENST00000398316 TRPM3Q9HCF6 1732 aaPredicted RBP5.63□□□□□ -1.51
FNDC3A-202ENST00000398316 SPAG9O60271 1321 aaKnown RBP5.62□□□□□ -1.51
FNDC3A-202ENST00000398316 SIRT1Q96EB6 747 aa5.62□□□□□ -1.51
FNDC3A-202ENST00000398316 ABCA3Q99758 1704 aa5.62□□□□□ -1.51
FNDC3A-202ENST00000398316 FAM135BQ49AJ0 1406 aa5.61□□□□□ -1.51
FNDC3A-202ENST00000398316 PELP1Q8IZL8 1130 aaKnown RBP5.61□□□□□ -1.51
FNDC3A-202ENST00000398316 NUP155O75694 1391 aa5.61□□□□□ -1.51
FNDC3A-202ENST00000398316 LTBP4Q8N2S1 1624 aa5.61□□□□□ -1.51
FNDC3A-202ENST00000398316 PUS7Q96PZ0 661 aaKnown RBP5.6□□□□□ -1.51
FNDC3A-202ENST00000398316 ZNF644Q9H582 1327 aaPredicted RBP5.6□□□□□ -1.51
FNDC3A-202ENST00000398316 DCCP43146 1447 aa5.6□□□□□ -1.51
FNDC3A-202ENST00000398316 ALS2Q96Q42 1657 aa5.6□□□□□ -1.51
FNDC3A-202ENST00000398316 WNK3Q9BYP7 1800 aa5.6□□□□□ -1.51
FNDC3A-202ENST00000398316 PLEKHG1Q9ULL1 1385 aa5.59□□□□□ -1.51
FNDC3A-202ENST00000398316 KIF20BQ96Q89 1820 aa5.59□□□□□ -1.51
FNDC3A-202ENST00000398316 KANK1Q14678 1352 aa5.59□□□□□ -1.51
FNDC3A-202ENST00000398316 FAM69CQ0P6D2 419 aa5.59□□□□□ -1.51
FNDC3A-202ENST00000398316 CYB5RLQ6IPT4 315 aa5.59□□□□□ -1.51
FNDC3A-202ENST00000398316 CICQ96RK0 1608 aaPredicted RBP5.59□□□□□ -1.51
FNDC3A-202ENST00000398316 LMO7Q8WWI1 1683 aa5.58□□□□□ -1.52
FNDC3A-202ENST00000398316 PLEKHG2Q9H7P9 1386 aa5.58□□□□□ -1.52
FNDC3A-202ENST00000398316 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.58□□□□□ -1.52
FNDC3A-202ENST00000398316 FAM208AQ9UK61 1670 aaKnown RBP5.58□□□□□ -1.52
FNDC3A-202ENST00000398316 SHPRHQ149N8 1683 aa5.58□□□□□ -1.52
FNDC3A-202ENST00000398316 ADAMTS13Q76LX8 1427 aa5.58□□□□□ -1.52
FNDC3A-202ENST00000398316 P3H3Q8IVL6 736 aa5.57□□□□□ -1.52
FNDC3A-202ENST00000398316 PLCH1Q4KWH8 1693 aa5.57□□□□□ -1.52
FNDC3A-202ENST00000398316 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.57□□□□□ -1.52
FNDC3A-202ENST00000398316 ARID4BQ4LE39 1312 aaPredicted RBP5.57□□□□□ -1.52
FNDC3A-202ENST00000398316 INSRP06213 1382 aa5.56□□□□□ -1.52
FNDC3A-202ENST00000398316 AHDC1Q5TGY3 1603 aaPredicted RBP5.56□□□□□ -1.52
FNDC3A-202ENST00000398316 APLP2Q06481 763 aa5.56□□□□□ -1.52
FNDC3A-202ENST00000398316 BRD4O60885 1362 aaPredicted RBP5.56□□□□□ -1.52
FNDC3A-202ENST00000398316 ZMYM3Q14202 1370 aa5.56□□□□□ -1.52
FNDC3A-202ENST00000398316 SLC52A1Q9NWF4 448 aa5.56□□□□□ -1.52
FNDC3A-202ENST00000398316 ADAMTS7Q9UKP4 1686 aa5.56□□□□□ -1.52
FNDC3A-202ENST00000398316 SCAF11Q99590 1463 aaKnown RBP5.55□□□□□ -1.52
FNDC3A-202ENST00000398316 RGPD1P0DJD0 1748 aa5.55□□□□□ -1.52
FNDC3A-202ENST00000398316 TSPY4P0CV99 314 aa5.54□□□□□ -1.52
FNDC3A-202ENST00000398316 TSPY10P0CW01 314 aa5.54□□□□□ -1.52
FNDC3A-202ENST00000398316 HNRNPMP52272 730 aaKnown RBP eCLIP5.54□□□□□ -1.526e-7■■■■■ 27.4
FNDC3A-202ENST00000398316 TNRQ92752 1358 aa5.53□□□□□ -1.52
FNDC3A-202ENST00000398316 TMEM2Q9UHN6 1383 aa5.53□□□□□ -1.52
FNDC3A-202ENST00000398316 ANKARQ7Z5J8 1434 aa5.53□□□□□ -1.52
FNDC3A-202ENST00000398316 ZNF831Q5JPB2 1677 aa5.53□□□□□ -1.52
FNDC3A-202ENST00000398316 TULP4Q9NRJ4 1543 aa5.53□□□□□ -1.52
FNDC3A-202ENST00000398316 AFAP1Q8N556 730 aa5.53□□□□□ -1.52
FNDC3A-202ENST00000398316 NPC1L1Q9UHC9 1359 aa5.52□□□□□ -1.53
FNDC3A-202ENST00000398316 PIK3C2AO00443 1686 aa5.52□□□□□ -1.53
FNDC3A-202ENST00000398316 CCDC144AA2RUR9 1427 aa5.52□□□□□ -1.53
FNDC3A-202ENST00000398316 NINLQ9Y2I6 1382 aa5.52□□□□□ -1.53
FNDC3A-202ENST00000398316 SMG6Q86US8 1419 aaKnown RBP5.52□□□□□ -1.53
FNDC3A-202ENST00000398316 MPHOSPH9Q99550 1183 aa5.52□□□□□ -1.53
FNDC3A-202ENST00000398316 ABCC11Q96J66 1382 aa5.52□□□□□ -1.53
FNDC3A-202ENST00000398316 PARP4Q9UKK3 1724 aaKnown RBP5.51□□□□□ -1.53
FNDC3A-202ENST00000398316 COL18A1P39060 1754 aa5.51□□□□□ -1.53
FNDC3A-202ENST00000398316 SLIT3O75094 1523 aa5.51□□□□□ -1.53
FNDC3A-202ENST00000398316 NWD2Q9ULI1 1742 aa5.5□□□□□ -1.53
FNDC3A-202ENST00000398316 ATP7BP35670 1465 aa5.5□□□□□ -1.53
FNDC3A-202ENST00000398316 LRPPRCP42704 1394 aaKnown RBP5.5□□□□□ -1.53
FNDC3A-202ENST00000398316 SSH2Q76I76 1423 aa5.5□□□□□ -1.53
FNDC3A-202ENST00000398316 RGPD3A6NKT7 1758 aaPredicted RBP5.49□□□□□ -1.53
FNDC3A-202ENST00000398316 RGPD4Q7Z3J3 1758 aa5.49□□□□□ -1.53
FNDC3A-202ENST00000398316 NCAPD2Q15021 1401 aa5.49□□□□□ -1.53
FNDC3A-202ENST00000398316 RIMS2Q9UQ26 1411 aa5.49□□□□□ -1.53
FNDC3A-202ENST00000398316 NRAPQ86VF7 1730 aa5.49□□□□□ -1.53
FNDC3A-202ENST00000398316 CDK12Q9NYV4 1490 aaPredicted RBP5.48□□□□□ -1.53
FNDC3A-202ENST00000398316 N4BP2Q86UW6 1770 aaPredicted RBP5.48□□□□□ -1.53
FNDC3A-202ENST00000398316 PEAK1Q9H792 1746 aa5.48□□□□□ -1.53
FNDC3A-202ENST00000398316 PTPRUQ92729 1446 aa5.48□□□□□ -1.53
FNDC3A-202ENST00000398316 CD163L1Q9NR16 1453 aa5.48□□□□□ -1.53
FNDC3A-202ENST00000398316 ZEB1P37275 1124 aaPredicted RBP5.48□□□□□ -1.53
FNDC3A-202ENST00000398316 SCAF1Q9H7N4 1312 aaKnown RBP5.47□□□□□ -1.53
FNDC3A-202ENST00000398316 RAPGEF3O95398 923 aa5.47□□□□□ -1.53
FNDC3A-202ENST00000398316 SLC24A1O60721 1099 aa5.47□□□□□ -1.53
FNDC3A-202ENST00000398316 RGPD8O14715 1765 aaPredicted RBP5.46□□□□□ -1.53
FNDC3A-202ENST00000398316 COL24A1Q17RW2 1714 aa5.46□□□□□ -1.53
FNDC3A-202ENST00000398316 LRRC37A3O60309 1634 aa5.46□□□□□ -1.54
FNDC3A-202ENST00000398316 KTN1Q86UP2 1357 aaKnown RBP5.46□□□□□ -1.54
FNDC3A-202ENST00000398316 COL16A1Q07092 1604 aaPredicted RBP5.46□□□□□ -1.54
FNDC3A-202ENST00000398316 PKD1L3Q7Z443 1732 aa5.46□□□□□ -1.54
FNDC3A-202ENST00000398316 TTBK1Q5TCY1 1321 aaPredicted RBP5.46□□□□□ -1.54
FNDC3A-202ENST00000398316 PKD2Q13563 968 aa5.45□□□□□ -1.54
FNDC3A-202ENST00000398316 C14orf93Q9H972 538 aaKnown RBP5.45□□□□□ -1.54
FNDC3A-202ENST00000398316 SIPA1L3O60292 1781 aaPredicted RBP5.45□□□□□ -1.54
FNDC3A-202ENST00000398316 NPHP4O75161 1426 aaPredicted RBP5.45□□□□□ -1.54
FNDC3A-202ENST00000398316 CPSF1Q10570 1443 aaKnown RBP5.45□□□□□ -1.54
FNDC3A-202ENST00000398316 MYT1LQ9UL68 1186 aa5.45□□□□□ -1.54
FNDC3A-202ENST00000398316 YTHDC2Q9H6S0 1430 aaKnown RBP5.44□□□□□ -1.54
FNDC3A-202ENST00000398316 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.44□□□□□ -1.54
FNDC3A-202ENST00000398316 VIRMAQ69YN4 1812 aaKnown RBP5.44□□□□□ -1.54
FNDC3A-202ENST00000398316 SHANK3Q9BYB0 1731 aa5.44□□□□□ -1.54
FNDC3A-202ENST00000398316 ADGRL3Q9HAR2 1447 aa5.44□□□□□ -1.54
FNDC3A-202ENST00000398316 PAPPAQ13219 1627 aa5.44□□□□□ -1.54
FNDC3A-202ENST00000398316 POLR3AO14802 1390 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms