RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 FOXD1Q16676 465 aa27.78■■■□□ 2.04
COLCA2-201ENST00000398035 TMEM131LA2VDJ0 1609 aa27.78■■■□□ 2.04
COLCA2-201ENST00000398035 TRPM2O94759 1503 aa27.78■■■□□ 2.04
COLCA2-201ENST00000398035 ILDR1Q86SU0 546 aaPredicted RBP27.77■■■□□ 2.04
COLCA2-201ENST00000398035 PLEKHG1Q9ULL1 1385 aa27.76■■■□□ 2.03
COLCA2-201ENST00000398035 IQGAP1P46940 1657 aa27.75■■■□□ 2.03
COLCA2-201ENST00000398035 SLC26A8Q96RN1 970 aa27.74■■■□□ 2.03
COLCA2-201ENST00000398035 IQSEC2Q5JU85 1478 aa27.73■■■□□ 2.03
COLCA2-201ENST00000398035 RPGRIP1LQ68CZ1 1315 aa27.73■■■□□ 2.03
COLCA2-201ENST00000398035 TBX22Q9Y458 520 aa27.73■■■□□ 2.03
COLCA2-201ENST00000398035 SPHKAPQ2M3C7 1700 aa27.72■■■□□ 2.03
COLCA2-201ENST00000398035 CPS1P31327 1500 aa27.72■■■□□ 2.03
COLCA2-201ENST00000398035 CCDC144AA2RUR9 1427 aa27.72■■■□□ 2.03
COLCA2-201ENST00000398035 NUTM2DQ5VT03 806 aaPredicted RBP27.7■■■□□ 2.03
COLCA2-201ENST00000398035 VGFO15240 615 aaPredicted RBP27.69■■■□□ 2.02
COLCA2-201ENST00000398035 KCNA6P17658 529 aa27.69■■■□□ 2.02
COLCA2-201ENST00000398035 CLTCL1P53675 1640 aa27.63■■■□□ 2.01
COLCA2-201ENST00000398035 TRIM26Q12899 539 aaPredicted RBP27.63■■■□□ 2.01
COLCA2-201ENST00000398035 SENP3Q9H4L4 574 aaPredicted RBP27.6■■■□□ 2.01
COLCA2-201ENST00000398035 PIK3R4Q99570 1358 aa27.59■■■□□ 2.01
COLCA2-201ENST00000398035 TOM1O60784 492 aa27.58■■■□□ 2.01
COLCA2-201ENST00000398035 RGL3Q3MIN7 710 aa27.58■■■□□ 2.01
COLCA2-201ENST00000398035 UBAP1LF5GYI3 381 aa27.58■■■□□ 2
COLCA2-201ENST00000398035 PROSER2Q86WR7 435 aaPredicted RBP27.57■■■□□ 2
COLCA2-201ENST00000398035 ADAMTS13Q76LX8 1427 aa27.56■■■□□ 2
COLCA2-201ENST00000398035 ANKRD30BQ9BXX2 1392 aa27.55■■■□□ 2
COLCA2-201ENST00000398035 LRRC7Q96NW7 1537 aa27.54■■■□□ 2
COLCA2-201ENST00000398035 SPATA31E1Q6ZUB1 1445 aa27.53■■■□□ 2
COLCA2-201ENST00000398035 MYO5BQ9ULV0 1848 aa27.52■■■□□ 2
COLCA2-201ENST00000398035 NEXMIFQ5QGS0 1516 aa27.51■■□□□ 1.99
COLCA2-201ENST00000398035 KIF1BO60333 1816 aa27.5■■□□□ 1.99
COLCA2-201ENST00000398035 DIP2AQ14689 1571 aa27.5■■□□□ 1.99
COLCA2-201ENST00000398035 AMOTL2Q9Y2J4 779 aa27.5■■□□□ 1.99
COLCA2-201ENST00000398035 TMEM94Q12767 1356 aa27.48■■□□□ 1.99
COLCA2-201ENST00000398035 NKTRP30414 1462 aaKnown RBP27.47■■□□□ 1.99
COLCA2-201ENST00000398035 STAC3Q96MF2 364 aa27.47■■□□□ 1.99
COLCA2-201ENST00000398035 SETBP1Q9Y6X0 1596 aa27.47■■□□□ 1.99
COLCA2-201ENST00000398035 NCOA3Q9Y6Q9 1424 aa27.44■■□□□ 1.98
COLCA2-201ENST00000398035 ADGRF5Q8IZF2 1346 aa27.42■■□□□ 1.98
COLCA2-201ENST00000398035 METP08581 1390 aa27.41■■□□□ 1.98
COLCA2-201ENST00000398035 NWD1Q149M9 1564 aa27.4■■□□□ 1.98
COLCA2-201ENST00000398035 STRCP1A6NGW2 1772 aa27.39■■□□□ 1.98
COLCA2-201ENST00000398035 PIP4K2BP78356 416 aa27.39■■□□□ 1.97
COLCA2-201ENST00000398035 MSH6P52701 1360 aa27.37■■□□□ 1.97
COLCA2-201ENST00000398035 SCAF1Q9H7N4 1312 aaKnown RBP27.37■■□□□ 1.97
COLCA2-201ENST00000398035 C14orf37Q86TY3 774 aa27.37■■□□□ 1.97
COLCA2-201ENST00000398035 RBM33Q96EV2 1170 aaKnown RBP27.37■■□□□ 1.97
COLCA2-201ENST00000398035 C19orf44Q9H6X5 657 aa27.37■■□□□ 1.97
COLCA2-201ENST00000398035 PTPRUQ92729 1446 aa27.36■■□□□ 1.97
COLCA2-201ENST00000398035 DCAF11Q8TEB1 546 aa27.33■■□□□ 1.97
COLCA2-201ENST00000398035 NRXN3Q9Y4C0 1643 aa27.33■■□□□ 1.97
COLCA2-201ENST00000398035 C14orf93Q9H972 538 aaKnown RBP27.33■■□□□ 1.96
COLCA2-201ENST00000398035 CHD2O14647 1828 aaKnown RBP27.32■■□□□ 1.96
COLCA2-201ENST00000398035 CADPS2Q86UW7 1296 aa27.31■■□□□ 1.96
COLCA2-201ENST00000398035 ALKQ9UM73 1620 aa27.3■■□□□ 1.96
COLCA2-201ENST00000398035 PIK3C2GO75747 1445 aa27.29■■□□□ 1.96
COLCA2-201ENST00000398035 ATF3P18847 181 aa27.29■■□□□ 1.96
COLCA2-201ENST00000398035 PPLO60437 1756 aa27.28■■□□□ 1.96
COLCA2-201ENST00000398035 SLAIN2Q9P270 581 aa27.28■■□□□ 1.96
COLCA2-201ENST00000398035 KDM2AQ9Y2K7 1162 aa27.28■■□□□ 1.96
COLCA2-201ENST00000398035 MYOM2P54296 1465 aa27.28■■□□□ 1.96
COLCA2-201ENST00000398035 NRXN1Q9ULB1 1477 aa27.26■■□□□ 1.95
COLCA2-201ENST00000398035 CFAP70Q5T0N1 1121 aa27.24■■□□□ 1.95
COLCA2-201ENST00000398035 FAM135BQ49AJ0 1406 aa27.23■■□□□ 1.95
COLCA2-201ENST00000398035 PTCH1Q13635 1447 aa27.23■■□□□ 1.95
COLCA2-201ENST00000398035 TMEM132EQ6IEE7 984 aa27.23■■□□□ 1.95
COLCA2-201ENST00000398035 PRAG1Q86YV5 1406 aa27.23■■□□□ 1.95
COLCA2-201ENST00000398035 DHX57Q6P158 1386 aaKnown RBP27.22■■□□□ 1.95
COLCA2-201ENST00000398035 ABCC11Q96J66 1382 aa27.22■■□□□ 1.95
COLCA2-201ENST00000398035 SIRT1Q96EB6 747 aa27.22■■□□□ 1.95
COLCA2-201ENST00000398035 LRPPRCP42704 1394 aaKnown RBP27.21■■□□□ 1.95
COLCA2-201ENST00000398035 HSPA1LP34931 641 aa27.21■■□□□ 1.95
COLCA2-201ENST00000398035 STK26Q9P289 416 aa27.2■■□□□ 1.94
COLCA2-201ENST00000398035 ROBO2Q9HCK4 1378 aa27.19■■□□□ 1.94
COLCA2-201ENST00000398035 XRN1Q8IZH2 1706 aaKnown RBP27.19■■□□□ 1.94
COLCA2-201ENST00000398035 DCCP43146 1447 aa27.19■■□□□ 1.94
COLCA2-201ENST00000398035 IFT172Q9UG01 1749 aa27.16■■□□□ 1.94
COLCA2-201ENST00000398035 SIN3AQ96ST3 1273 aa27.16■■□□□ 1.94
COLCA2-201ENST00000398035 XIRP1Q702N8 1843 aaKnown RBP27.15■■□□□ 1.94
COLCA2-201ENST00000398035 TECPR2O15040 1411 aa27.15■■□□□ 1.94
COLCA2-201ENST00000398035 YTHDC2Q9H6S0 1430 aaKnown RBP27.15■■□□□ 1.94
COLCA2-201ENST00000398035 NEUROD1Q13562 356 aa27.15■■□□□ 1.94
COLCA2-201ENST00000398035 ADGRL3Q9HAR2 1447 aa27.14■■□□□ 1.94
COLCA2-201ENST00000398035 PCGF6Q9BYE7 350 aa27.12■■□□□ 1.93
COLCA2-201ENST00000398035 L3MBTL2Q969R5 705 aa27.11■■□□□ 1.93
COLCA2-201ENST00000398035 WAPLQ7Z5K2 1190 aa27.1■■□□□ 1.93
COLCA2-201ENST00000398035 SETD1AO15047 1707 aaKnown RBP27.1■■□□□ 1.93
COLCA2-201ENST00000398035 POGKQ9P215 609 aa27.06■■□□□ 1.92
COLCA2-201ENST00000398035 LAMC1P11047 1609 aa27.06■■□□□ 1.92
COLCA2-201ENST00000398035 PRAM1Q96QH2 718 aa27.03■■□□□ 1.92
COLCA2-201ENST00000398035 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.03■■□□□ 1.92
COLCA2-201ENST00000398035 ASXL1Q8IXJ9 1541 aa27.03■■□□□ 1.92
COLCA2-201ENST00000398035 BRINP3Q76B58 766 aa27.02■■□□□ 1.92
COLCA2-201ENST00000398035 TRAK1Q9UPV9 953 aa27.02■■□□□ 1.92
COLCA2-201ENST00000398035 MST1RQ04912 1400 aa27.01■■□□□ 1.91
COLCA2-201ENST00000398035 PLEKHH1Q9ULM0 1364 aa26.98■■□□□ 1.91
COLCA2-201ENST00000398035 ADGRB1O14514 1584 aa26.98■■□□□ 1.91
COLCA2-201ENST00000398035 DLC1Q96QB1 1528 aa26.96■■□□□ 1.91
COLCA2-201ENST00000398035 TONSLQ96HA7 1378 aa26.96■■□□□ 1.91
COLCA2-201ENST00000398035 C1orf167Q5SNV9 1468 aa26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms